CmaCh14G017360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G017360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAB domain-containing protein
Location	Cma_Chr14: 12730416 .. 12730586 (+)
RNA-Seq Expression	CmaCh14G017360
Synteny	CmaCh14G017360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCTTGTTGCATTCTGAATCTCGGCGCTTATATTCTTGGTGGTGGGATAGCCATATCAGCCCCAAGAACTCAAAATGGCTACAGGAGAATCTTACAGGTTATGCTTCTTATTATTGTGTTCAATCTTTTATGGAACTACCTTGCTTCCTCTTCAATAGAAGTTTA

mRNA sequence

ATGGCGACCTTGTTGCATTCTGAATCTCGGCGCTTATATTCTTGGTGGTGGGATAGCCATATCAGCCCCAAGAACTCAAAATGGCTACAGGAGAATCTTACAGGTTATGCTTCTTATTATTGTGTTCAATCTTTTATGGAACTACCTTGCTTCCTCTTCAATAGAAGTTTA

Coding sequence (CDS)

ATGGCGACCTTGTTGCATTCTGAATCTCGGCGCTTATATTCTTGGTGGTGGGATAGCCATATCAGCCCCAAGAACTCAAAATGGCTACAGGAGAATCTTACAGGTTATGCTTCTTATTATTGTGTTCAATCTTTTATGGAACTACCTTGCTTCCTCTTCAATAGAAGTTTA

Protein sequence

MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTGYASYYCVQSFMELPCFLFNRSL

Homology

[Close]

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot
Match: Q9LUI2 (Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 2.7e-11
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MAT+LHSESRRLYSWWWDSHI PKNSKW+Q+NL+
Sbjct: 1  MATVLHSESRRLYSWWWDSHI-PKNSKWIQQNLS 33

[Close]

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot
Match: F4HZB5 (Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 9.6e-09
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          M  +++  S+R YSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MTAVVNGNSKR-YSWWWDSHISPKNSKWLQENLT 33

[Close]

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot
Match: F4JIF4 (Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.2e-08
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENL 34
          MA+L  SES RLYSWWWDSHI PKNSKW+Q+NL
Sbjct: 1  MASLSQSESGRLYSWWWDSHI-PKNSKWIQDNL 32

[Close]

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot
Match: Q9ZQX8 (Protein NETWORKED 1C OS=Arabidopsis thaliana OX=3702 GN=NET1C PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.1e-07
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 7  SESRRLYSWWWDSHISPKNSKWLQENL 34
          S S+R+YSWWWDSH +PKNSKWLQ+NL
Sbjct: 7  SNSKRMYSWWWDSHNTPKNSKWLQDNL 33

[Close]

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot
Match: Q84VY2 (Protein NETWORKED 4B OS=Arabidopsis thaliana OX=3702 GN=NET4B PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.8e-05
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 0


Query: 7  SESRRLYSWWWDSHISPKNSKWLQENL 34
          S +++ +SWWWDSH  PKNSKWL ENL
Sbjct: 15 SMTKKSHSWWWDSHNCPKNSKWLAENL 41

[Close]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL
Match: A0A1U8ABN4 (protein NETWORKED 1D isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104598647 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 2.5e-12
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 36
          MATLLH+ESRRLYSWWWDSHISPKNSKWLQENLTG
Sbjct: 1  MATLLHAESRRLYSWWWDSHISPKNSKWLQENLTG 35

[Close]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL
Match: W9QYP4 (NAB domain-containing protein OS=Morus notabilis OX=981085 GN=L484_009101 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-12
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1   MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 36
           M TLLHSESRRLYSWWWDSHISPKNSKWLQENLTG
Sbjct: 76  MGTLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 110

[Close]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL
Match: A0A6J1ISN2 (protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111479018 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 34

[Close]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL
Match: A0A6J1IJJ1 (protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111474107 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 34

[Close]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL
Match: A0A445ISA9 (Protein NETWORKED 1A isoform A OS=Glycine soja OX=3848 GN=D0Y65_028023 PE=4 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 5.6e-12
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 34

[Close]

BLAST of CmaCh14G017360 vs. NCBI nr
Match: KAG7018730.1 (Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 121.3 bits (303), Expect = 2.7e-24
Identity = 55/57 (96.49%), Postives = 55/57 (96.49%), Query Frame = 0


Query: 1   MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTGYASYYCVQSFMELPCFLFNRSL 58
           MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTGYASYY VQSFM LPCFLFNRSL
Sbjct: 85  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTGYASYYHVQSFMVLPCFLFNRSL 141

[Close]

BLAST of CmaCh14G017360 vs. NCBI nr
Match: KHN02739.1 (hypothetical protein glysoja_015981 [Glycine soja])

HSP 1 Score: 81.6 bits (200), Expect = 2.3e-12
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 36
          MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG
Sbjct: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 35

[Close]

BLAST of CmaCh14G017360 vs. NCBI nr
Match: XP_010259117.1 (PREDICTED: protein NETWORKED 1D isoform X1 [Nelumbo nucifera] >DAD47920.1 TPA_asm: hypothetical protein HUJ06_017857 [Nelumbo nucifera])

HSP 1 Score: 80.5 bits (197), Expect = 5.2e-12
Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 36
          MATLLH+ESRRLYSWWWDSHISPKNSKWLQENLTG
Sbjct: 1  MATLLHAESRRLYSWWWDSHISPKNSKWLQENLTG 35

[Close]

BLAST of CmaCh14G017360 vs. NCBI nr
Match: EXB51137.1 (hypothetical protein L484_009101 [Morus notabilis])

HSP 1 Score: 80.1 bits (196), Expect = 6.8e-12
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0


Query: 1   MATLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 36
           M TLLHSESRRLYSWWWDSHISPKNSKWLQENLTG
Sbjct: 76  MGTLLHSESRRLYSWWWDSHISPKNSKWLQENLTG 110

[Close]

BLAST of CmaCh14G017360 vs. NCBI nr
Match: XP_028785167.1 (protein NETWORKED 1A-like [Prosopis alba])

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-11
Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 34

[Close]

BLAST of CmaCh14G017360 vs. TAIR 10
Match: AT3G22790.1 (Kinase interacting (KIP1-like) family protein )

HSP 1 Score: 68.6 bits (166), Expect = 1.9e-12
Identity = 29/34 (85.29%), Postives = 33/34 (97.06%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          MAT+LHSESRRLYSWWWDSHI PKNSKW+Q+NL+
Sbjct: 1  MATVLHSESRRLYSWWWDSHI-PKNSKWIQQNLS 33

[Close]

BLAST of CmaCh14G017360 vs. TAIR 10
Match: AT1G03080.1 (kinase interacting (KIP1-like) family protein )

HSP 1 Score: 60.1 bits (144), Expect = 6.8e-10
Identity = 25/34 (73.53%), Postives = 29/34 (85.29%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENLT 35
          M  +++  S+R YSWWWDSHISPKNSKWLQENLT
Sbjct: 1  MTAVVNGNSKR-YSWWWDSHISPKNSKWLQENLT 33

[Close]

BLAST of CmaCh14G017360 vs. TAIR 10
Match: AT4G14760.1 (kinase interacting (KIP1-like) family protein )

HSP 1 Score: 59.7 bits (143), Expect = 8.9e-10
Identity = 26/33 (78.79%), Postives = 29/33 (87.88%), Query Frame = 0


Query: 1  MATLLHSESRRLYSWWWDSHISPKNSKWLQENL 34
          MA+L  SES RLYSWWWDSHI PKNSKW+Q+NL
Sbjct: 1  MASLSQSESGRLYSWWWDSHI-PKNSKWIQDNL 32

[Close]

BLAST of CmaCh14G017360 vs. TAIR 10
Match: AT4G02710.1 (Kinase interacting (KIP1-like) family protein )

HSP 1 Score: 56.6 bits (135), Expect = 7.5e-09
Identity = 21/27 (77.78%), Postives = 25/27 (92.59%), Query Frame = 0


Query: 7  SESRRLYSWWWDSHISPKNSKWLQENL 34
          S S+R+YSWWWDSH +PKNSKWLQ+NL
Sbjct: 7  SNSKRMYSWWWDSHNTPKNSKWLQDNL 33

[Close]

BLAST of CmaCh14G017360 vs. TAIR 10
Match: AT2G30500.1 (Kinase interacting (KIP1-like) family protein )

HSP 1 Score: 48.1 bits (113), Expect = 2.7e-06
Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 0


Query: 7  SESRRLYSWWWDSHISPKNSKWLQENL 34
          S +++ +SWWWDSH  PKNSKWL ENL
Sbjct: 15 SMTKKSHSWWWDSHNCPKNSKWLAENL 41

The following BLAST results are available for this feature:

BLAST of CmaCh14G017360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUI2	2.7e-11	85.29	Protein NETWORKED 1A OS=Arabidopsis thaliana OX=3702 GN=NET1A PE=1 SV=1	[more]
F4HZB5	9.6e-09	73.53	Protein NETWORKED 1D OS=Arabidopsis thaliana OX=3702 GN=NET1D PE=3 SV=1	[more]
F4JIF4	1.2e-08	78.79	Protein NETWORKED 1B OS=Arabidopsis thaliana OX=3702 GN=NET1B PE=2 SV=1	[more]
Q9ZQX8	1.1e-07	77.78	Protein NETWORKED 1C OS=Arabidopsis thaliana OX=3702 GN=NET1C PE=3 SV=1	[more]
Q84VY2	3.8e-05	66.67	Protein NETWORKED 4B OS=Arabidopsis thaliana OX=3702 GN=NET4B PE=2 SV=1	[more]

BLAST of CmaCh14G017360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U8ABN4	2.5e-12	97.14	protein NETWORKED 1D isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104598647 PE=4...	[more]
W9QYP4	3.3e-12	97.14	NAB domain-containing protein OS=Morus notabilis OX=981085 GN=L484_009101 PE=4 S...	[more]
A0A6J1ISN2	5.6e-12	100.00	protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111479018 PE=4 SV=1	[more]
A0A6J1IJJ1	5.6e-12	100.00	protein NETWORKED 1A-like OS=Cucurbita maxima OX=3661 GN=LOC111474107 PE=4 SV=1	[more]
A0A445ISA9	5.6e-12	100.00	Protein NETWORKED 1A isoform A OS=Glycine soja OX=3848 GN=D0Y65_028023 PE=4 SV=1	[more]

BLAST of CmaCh14G017360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018730.1	2.7e-24	96.49	Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KHN02739.1	2.3e-12	100.00	hypothetical protein glysoja_015981 [Glycine soja]	[more]
XP_010259117.1	5.2e-12	97.14	PREDICTED: protein NETWORKED 1D isoform X1 [Nelumbo nucifera] >DAD47920.1 TPA_as...	[more]
EXB51137.1	6.8e-12	97.14	hypothetical protein L484_009101 [Morus notabilis]	[more]
XP_028785167.1	1.2e-11	100.00	protein NETWORKED 1A-like [Prosopis alba]	[more]

BLAST of CmaCh14G017360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22790.1	1.9e-12	85.29	Kinase interacting (KIP1-like) family protein	[more]
AT1G03080.1	6.8e-10	73.53	kinase interacting (KIP1-like) family protein	[more]
AT4G14760.1	8.9e-10	78.79	kinase interacting (KIP1-like) family protein	[more]
AT4G02710.1	7.5e-09	77.78	Kinase interacting (KIP1-like) family protein	[more]
AT2G30500.1	2.7e-06	66.67	Kinase interacting (KIP1-like) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32258	PROTEIN NETWORKED 4A	coord: 1..35
None	No IPR available	PANTHER	PTHR32258:SF6	PROTEIN NETWORKED 1D ISOFORM X1	coord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G017360.1	CmaCh14G017360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding