CmaCh14G017350 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G017350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 12729800 .. 12730295 (+)
RNA-Seq ExpressionCmaCh14G017350
SyntenyCmaCh14G017350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAGCCGGGAGACAAGGAATGAGTATCAGCCTGAGTCAAGAGACAGCCACAGAAAAACATGGGTGAAGAAGCTGATTGGTTAGTGGGGTTTTTTTTTTTCTTGTGGGTTTCATTTGATCGAAATGTTTTATGAGAAGAGTGTGCTTTTTCGCCGCTTTTGGGGGTGACCCATTTGCTTGAGCATTGATTTTGTGTTCTTTTTGAACTGTAGATTTGGTTGGATGATTGGAAACAAGCAGCTGTTTCAGCCGTTCTGGTGATTTTTGATCCCCTGGTGCTCAGCACAGGTAAGCTTTTGAACAAATGGCTTCTTCCTTTTGATTATACTGCACATCCTATACAATCCTTTGAGGAAGTTCTATGTGGTTGAAGATCTGGATTGTTTAAAGGGCCAATATGAACAAATTTTCATTTGATTTATAATCCATTTGCTGTTCCTATGAAGGTGTAGTGAGTGACAAGGAGCTGGAAAGGCTCGTGAAGAATTAA

mRNA sequence

ATGGGGAATAGCCGGGAGACAAGGAATGAGTATCAGCCTGAGTCAAGAGACAGCCACAGAAAAACATGGATTTGGTTGGATGATTGGAAACAAGCAGCTGTTTCAGCCGTTCTGGTGATTTTTGATCCCCTGGTGCTCAGCACAGGTGTAGTGAGTGACAAGGAGCTGGAAAGGCTCGTGAAGAATTAA

Coding sequence (CDS)

ATGGGGAATAGCCGGGAGACAAGGAATGAGTATCAGCCTGAGTCAAGAGACAGCCACAGAAAAACATGGATTTGGTTGGATGATTGGAAACAAGCAGCTGTTTCAGCCGTTCTGGTGATTTTTGATCCCCTGGTGCTCAGCACAGGTGTAGTGAGTGACAAGGAGCTGGAAAGGCTCGTGAAGAATTAA

Protein sequence

MGNSRETRNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLSTGVVSDKELERLVKN
Homology
[Close]
BLAST of CmaCh14G017350 vs. NCBI nr
Match: KAG6582322.1 (Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119.8 bits (299), Expect = 8.4e-24
Identity = 58/59 (98.31%), Postives = 58/59 (98.31%), Query Frame = 0 

Query: 1  MGNSRETRNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLSTGVVSDKELERL 60
          MGNSRE RNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLSTGVVSDKELERL
Sbjct: 1  MGNSREMRNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLSTGVVSDKELERL 59

[Close]
BLAST of CmaCh14G017350 vs. NCBI nr
Match: KAG7018730.1 (Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 99.8 bits (247), Expect = 9.0e-18
Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0 

Query: 1  MGNSRETRNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLST 49
          MGNSRE RNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLST
Sbjct: 1  MGNSREMRNEYQPESRDSHRKTWIWLDDWKQAAVSAVLVIFDPLVLST 48

The following BLAST results are available for this feature:
BLAST of CmaCh14G017350 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G017350 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G017350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6582322.18.4e-2498.31Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7018730.19.0e-1897.92Protein NETWORKED 1A, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmaCh14G017350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G017350.1CmaCh14G017350.1mRNA