CmaCh14G016980 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G016980
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Receptor-like serine/threonine-protein kinase
Location	Cma_Chr14: 12604619 .. 12604918 (-)
RNA-Seq Expression	CmaCh14G016980
Synteny	CmaCh14G016980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCATCAAAGTCTTGTATCTCTCTCTCCCATTGCTTCTCTGTTTTCTTCACTGTTACGCTCAGAACGGCATCGTTAATTTGAGGTCATCAATCGTTGCTGGGTCGAATCATTTTTGGGTATCTCCCTCCGGCGAGTTTGCTTTTGGGTTCCACGAGATCACCCCTGACAGATACCTTGTCGGCATAGTGTTCGACAAAATTCCTGGAGAACTTTGGTATGGTCCGCTAACAGAGACGACCCAGCAAACGCTAAGTCCACCATTATTCTCAAATCTTCCGGCGAATTTGCTCTGA

mRNA sequence

ATGGCTGCCATCAAAGTCTTGTATCTCTCTCTCCCATTGCTTCTCTGTTTTCTTCACTGTTACGCTCAGAACGGCATCGTTAATTTGAGGTCATCAATCGTTGCTGGGTCGAATCATTTTTGGGTATCTCCCTCCGGCGAGTTTGCTTTTGGGTTCCACGAGATCACCCCTGACAGATACCTTGTCGGCATAGTGTTCGACAAAATTCCTGGAGAACTTTGGTATGGTCCGCTAACAGAGACGACCCAGCAAACGCTAAGTCCACCATTATTCTCAAATCTTCCGGCGAATTTGCTCTGA

Coding sequence (CDS)

ATGGCTGCCATCAAAGTCTTGTATCTCTCTCTCCCATTGCTTCTCTGTTTTCTTCACTGTTACGCTCAGAACGGCATCGTTAATTTGAGGTCATCAATCGTTGCTGGGTCGAATCATTTTTGGGTATCTCCCTCCGGCGAGTTTGCTTTTGGGTTCCACGAGATCACCCCTGACAGATACCTTGTCGGCATAGTGTTCGACAAAATTCCTGGAGAACTTTGGTATGGTCCGCTAACAGAGACGACCCAGCAAACGCTAAGTCCACCATTATTCTCAAATCTTCCGGCGAATTTGCTCTGA

Protein sequence

MAAIKVLYLSLPLLLCFLHCYAQNGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRYLVGIVFDKIPGELWYGPLTETTQQTLSPPLFSNLPANLL

Homology

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BLAST of CmaCh14G016980 vs. ExPASy Swiss-Prot
Match: Q25AG2 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. indica OX=39946 GN=LECRK4 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 9  LSLPLLLCFLHCYAQNGIVNLRSSIVA-GSNHFWVSPSGEFAFGFHEITPDR--YLVGIV 68
          LSL LL+      AQ   ++L +S+   G N+ W+SPSG+FAFGF  I  +   YL+ I 
Sbjct: 8  LSLQLLVLLSSPSAQAQNISLGTSLTTQGPNNAWLSPSGDFAFGFRPIDGNSSFYLLAIW 67

Query: 69 FDKIPGE--LWYGPLTETTQQTLSPP 90
          F+KI  +   WY   +E   Q +  P
Sbjct: 68 FNKISDKTATWYAKTSEQEPQPIQVP 93

[Close]

BLAST of CmaCh14G016980 vs. ExPASy Swiss-Prot
Match: Q7FAZ0 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sativa subsp. japonica OX=39947 GN=LECRK4 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 1.7e-05
Identity = 33/86 (38.37%), Postives = 47/86 (54.65%), Query Frame = 0


Query: 9  LSLPLLLCFLHCYAQNGIVNLRSSIVA-GSNHFWVSPSGEFAFGFHEITPDR--YLVGIV 68
          LSL LL+      AQ   ++L +S+   G N+ W+SPSG+FAFGF  I  +   YL+ I 
Sbjct: 8  LSLQLLVLLSSPSAQAQNISLGTSLTTQGPNNAWLSPSGDFAFGFRPIDGNSSFYLLAIW 67

Query: 69 FDKIPGE--LWYGPLTETTQQTLSPP 90
          F+KI  +   WY   +E   Q +  P
Sbjct: 68 FNKISDKTATWYAKTSEQEPQPIQVP 93

[Close]

BLAST of CmaCh14G016980 vs. ExPASy Swiss-Prot
Match: Q39202 (G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsis thaliana OX=3702 GN=RLK1 PE=2 SV=2)

HSP 1 Score: 44.3 bits (103), Expect = 9.4e-04
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 6  VLYLSLPLLLCFLHCYAQ---NGIVNLRSSIVAGSNH----FWVSPSGEFAFGFHEITP- 65
          +++L L L L     ++Q   NG V +  S+ A  +      W SPSG+FAFGF +I P 
Sbjct: 8  IIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPN 67

Query: 66 DRYLVGIVFDKIPGE--LWYGPLTETT 83
          D + + I FDKI  +  +W+     TT
Sbjct: 68 DGFTLSIWFDKISDKTIVWHAQAVNTT 94

[Close]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL
Match: A0A6J1GV65 (Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=LOC111457760 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-08
Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 0


Query: 6  VLYLSLPLLLCFLHCYAQNG-IVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRYLVGI 65
          +L L   LL+ F  C AQ G  ++  SSI AGS H WVSP G+FAFGF+ ++ D YL GI
Sbjct: 4  ILMLLSFLLMNFHECLAQTGSAISPGSSITAGSTHSWVSPLGDFAFGFYHLSNDLYLAGI 63

Query: 66 VFDKIPGEL 74
           FDKIP ++
Sbjct: 64 WFDKIPEKI 72

[Close]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL
Match: A0A6N2NHV5 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS509318 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 5.0e-08
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 0


Query: 10 SLPLLLCFLHCYAQ----NGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRYLVGIV 69
          SLP +L FL   AQ       +NL SS+ AG+N  W SPSG+FAFGF+ +   ++LVGI 
Sbjct: 8  SLPFVLSFLGSLAQPQTTTNTINLGSSMTAGTNSSWRSPSGDFAFGFYGLLNGQFLVGIW 67

Query: 70 FDKIPG 72
          FDKIPG
Sbjct: 68 FDKIPG 73

[Close]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL
Match: A0A5N6RDD9 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015632 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-07
Identity = 41/99 (41.41%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 1  MAAIKVLYLSLPLLLCFL-HCYAQNGI-VNLRSSIVAGSNHFWVSPSGEFAFGFHEITPD 60
          M   ++   S P  L  L  C   +G  ++L SSI+AG+N  W SPSG+FAFGF+ +   
Sbjct: 1  MGGARICLWSFPFFLSLLCSCSEMSGSRIDLGSSIIAGANSSWQSPSGDFAFGFYPLVTG 60

Query: 61 RYLVGIVFDKIPGE--LWYGPLTETTQQTLS--PPLFSN 94
           YLVGI FDKIP +  +W     +  +Q LS    L+SN
Sbjct: 61 LYLVGIWFDKIPEKTLVWSSNRDDPVRQRLSMGQKLYSN 99

[Close]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL
Match: A0A4D6LSE2 (Receptor-like serine/threonine-protein kinase OS=Vigna unguiculata OX=3917 GN=DEO72_LG4g2821 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.9e-07
Identity = 32/62 (51.61%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 9  LSLPLLLCFLHCYAQNGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRYLVGIVFDK 68
          LS+  LLC          + L S+IVAG+N  W+S SG++AFGF+ +T  RYLVGI FDK
Sbjct: 7  LSVAFLLCSFTSGNHANSIQLGSTIVAGTNSSWLSSSGDYAFGFYHLTTGRYLVGIWFDK 66

Query: 69 IP 71
          IP
Sbjct: 67 IP 68

[Close]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL
Match: A0A061EMU4 (Receptor-like protein kinase 1 OS=Theobroma cacao OX=3641 GN=TCM_020606 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 2.5e-07
Identity = 38/73 (52.05%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 1  MAAIKVLYLSLPLLLCFL---HCYAQNGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITP 60
          MAA ++L  +L LLLCF+        N  +NL SSI AGSN  W S SG+FAFGF+ +  
Sbjct: 1  MAATRILVWTL-LLLCFILGSSAQTTNNTINLGSSITAGSNSSWRSTSGDFAFGFYLLPR 60

Query: 61 DRYLVGIVFDKIP 71
            +LVGI FDKIP
Sbjct: 61 GLFLVGIWFDKIP 72

[Close]

BLAST of CmaCh14G016980 vs. NCBI nr
Match: KAG7018702.1 (G-type lectin S-receptor-like serine/threonine-protein kinase RLK1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.5 bits (358), Expect = 1.9e-30
Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 0


Query: 1  MAAIKVLYLSLPLLLCFLHCYAQNGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRY 60
          MAAIK+LYLSLPLLLCFLHCYAQNGIVNL SSIVAGSNHFWVSPSGEFAFGFHEITPDRY
Sbjct: 1  MAAIKLLYLSLPLLLCFLHCYAQNGIVNLGSSIVAGSNHFWVSPSGEFAFGFHEITPDRY 60

Query: 61 LVGIVFDKIP 71
          LVGIVFDKIP
Sbjct: 61 LVGIVFDKIP 70

[Close]

BLAST of CmaCh14G016980 vs. NCBI nr
Match: XP_023527957.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 140.2 bits (352), Expect = 9.6e-30
Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0


Query: 1  MAAIKVLYLSLPLLLCFLHCYAQNGIVNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRY 60
          MAAIKVLY SLPLLLCFLHCYAQNGIVNL+SSIVAGSN FWVSPSGEFAFGFHEITPDRY
Sbjct: 1  MAAIKVLYFSLPLLLCFLHCYAQNGIVNLKSSIVAGSNDFWVSPSGEFAFGFHEITPDRY 60

Query: 61 LVGIVFDKIP 71
          LVGIVFDKIP
Sbjct: 61 LVGIVFDKIP 70

[Close]

BLAST of CmaCh14G016980 vs. NCBI nr
Match: KAG6582293.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 83.2 bits (204), Expect = 1.4e-12
Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0


Query: 1  MAAIKVLYLSLPLLLCFLHCYAQNGIVNLRSSIVAGSNHFWVSPS 46
          MAAIKVLYLSLPLLLCFLHCYAQNGIVNL+SSIVAGSN FW +P+
Sbjct: 1  MAAIKVLYLSLPLLLCFLHCYAQNGIVNLKSSIVAGSNDFWDNPA 45

[Close]

BLAST of CmaCh14G016980 vs. NCBI nr
Match: XP_038896440.1 (G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [Benincasa hispida])

HSP 1 Score: 72.4 bits (176), Expect = 2.5e-09
Identity = 39/69 (56.52%), Postives = 50/69 (72.46%), Query Frame = 0


Query: 6  VLYLSLPLLLCFLHCYAQNGI-VNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDRYLVGI 65
          +++LS  +LL F  C AQNG  ++  SSI AGSNH W+SPSG+FAFGF+ +  + YLVGI
Sbjct: 4  MIFLSF-VLLNFYKCLAQNGSPISRGSSIAAGSNHTWLSPSGDFAFGFYRLPNNLYLVGI 63

Query: 66 VFDKIPGEL 74
           FDKIP  L
Sbjct: 64 WFDKIPQTL 71

[Close]

BLAST of CmaCh14G016980 vs. NCBI nr
Match: KAG5232814.1 (G-type lectin S-receptor serine/threonine-protein kinase [Salix suchowensis])

HSP 1 Score: 69.3 bits (168), Expect = 2.1e-08
Identity = 37/72 (51.39%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 4  IKVLYLSLPLLLCFLHCYAQNGI----VNLRSSIVAGSNHFWVSPSGEFAFGFHEITPDR 63
          + V+  SLP +L FL   AQ  I    +NL SS+ AG+N  W SPSG+FAFGF+ +   +
Sbjct: 2  VSVVLWSLPFVLSFLGFVAQPQITANTINLGSSMTAGTNSSWRSPSGDFAFGFYRVLNGQ 61

Query: 64 YLVGIVFDKIPG 72
          +LVGI FDKIPG
Sbjct: 62 FLVGIWFDKIPG 73

[Close]

BLAST of CmaCh14G016980 vs. TAIR 10
Match: AT5G60900.1 (receptor-like protein kinase 1 )

HSP 1 Score: 44.3 bits (103), Expect = 6.7e-05
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = 0


Query: 6  VLYLSLPLLLCFLHCYAQ---NGIVNLRSSIVAGSNH----FWVSPSGEFAFGFHEITP- 65
          +++L L L L     ++Q   NG V +  S+ A  +      W SPSG+FAFGF +I P 
Sbjct: 8  IIHLVLILQLQTFFVFSQNIRNGSVPVGESLTASESQQISSSWRSPSGDFAFGFRKIQPN 67

Query: 66 DRYLVGIVFDKIPGE--LWYGPLTETT 83
          D + + I FDKI  +  +W+     TT
Sbjct: 68 DGFTLSIWFDKISDKTIVWHAQAVNTT 94

The following BLAST results are available for this feature:

BLAST of CmaCh14G016980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q25AG2	1.7e-05	38.37	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sa...	[more]
Q7FAZ0	1.7e-05	38.37	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK4 OS=Oryza sa...	[more]
Q39202	9.4e-04	35.63	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 OS=Arabidopsi...	[more]

BLAST of CmaCh14G016980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GV65	2.3e-08	52.17	Receptor-like serine/threonine-protein kinase OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6N2NHV5	5.0e-08	53.03	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS509318 PE=4 SV=...	[more]
A0A5N6RDD9	1.1e-07	41.41	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_015632 PE=4 SV=1	[more]
A0A4D6LSE2	1.9e-07	51.61	Receptor-like serine/threonine-protein kinase OS=Vigna unguiculata OX=3917 GN=DE...	[more]
A0A061EMU4	2.5e-07	52.05	Receptor-like protein kinase 1 OS=Theobroma cacao OX=3641 GN=TCM_020606 PE=4 SV=...	[more]

BLAST of CmaCh14G016980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7018702.1	1.9e-30	97.14	G-type lectin S-receptor-like serine/threonine-protein kinase RLK1, partial [Cuc...	[more]
XP_023527957.1	9.6e-30	95.71	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2 [Cucurbita ...	[more]
KAG6582293.1	1.4e-12	88.89	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK2, partial [C...	[more]
XP_038896440.1	2.5e-09	56.52	G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 [Benincasa ...	[more]
KAG5232814.1	2.1e-08	51.39	G-type lectin S-receptor serine/threonine-protein kinase [Salix suchowensis]	[more]

BLAST of CmaCh14G016980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60900.1	6.7e-05	35.63	receptor-like protein kinase 1	[more]

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G016980.1	CmaCh14G016980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009987	cellular process
molecular_function	GO:0005488	binding
molecular_function	GO:0004672	protein kinase activity