CmaCh14G015500 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTGAATCACAGCTGTTCTTCTTCTTTGGCCGAATCTATGCTCCGTTCTTCCTTACTGATATCGTTCTCTTTGAGCTGATGTAATGTTCGTGGGTTGGTTTGGTTTAGGTTGAGTTGAGTTGAGTTGGATTTTGGCCGATCTTTCTGTTTCTCTCGATTTTGTAATCTTTTGTTCTTGTGATCAATAAAAGTTGGAATTTTTTTAAGTGGGTTGATCAATATCTCGATTACTAGGTCGATTTAGTTTAAGATATTAATTTTGGAATTATTTTGGTTCTTGATGTTTAGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEPGIDRKASDFIARFYESRVSDSEQQTFAVLKVFSIDLEPYFCS Homology
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6J1C955 (uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009454 PE=4 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32 Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6J1FBH6 (uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC111442555 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29 Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6P6FMC7 (uncharacterized protein LOC112488971 OS=Ziziphus jujuba OX=326968 GN=LOC112488971 PE=4 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17 Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 0
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A0A0LAW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171730 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.3e-15 Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 0
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A5A7U8R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00130 PE=4 SV=1) HSP 1 Score: 90.5 bits (223), Expect = 4.4e-15 Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG6582136.1 (hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 187.2 bits (474), Expect = 7.1e-44 Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0
BLAST of CmaCh14G015500 vs. NCBI nr
Match: XP_022138231.1 (uncharacterized protein LOC111009454 [Momordica charantia]) HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31 Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0
BLAST of CmaCh14G015500 vs. NCBI nr
Match: XP_022935735.1 (uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 uncharacterized protein LOC111800720 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 139.0 bits (349), Expect = 2.2e-29 Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG7029045.1 (hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29 Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0
BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG6597601.1 (hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123.6 bits (309), Expect = 9.6e-25 Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 67.0 bits (162), Expect = 9.9e-12 Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0
BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein ) HSP 1 Score: 50.4 bits (119), Expect = 9.6e-07 Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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