CmaCh14G015500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G015500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 11683061 .. 11683658 (+)
RNA-Seq ExpressionCmaCh14G015500
SyntenyCmaCh14G015500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTGAATCACAGCTGTTCTTCTTCTTTGGCCGAATCTATGCTCCGTTCTTCCTTACTGATATCGTTCTCTTTGAGCTGATGTAATGTTCGTGGGTTGGTTTGGTTTAGGTTGAGTTGAGTTGAGTTGGATTTTGGCCGATCTTTCTGTTTCTCTCGATTTTGTAATCTTTTGTTCTTGTGATCAATAAAAGTTGGAATTTTTTTAAGTGGGTTGATCAATATCTCGATTACTAGGTCGATTTAGTTTAAGATATTAATTTTGGAATTATTTTGGTTCTTGATGTTTAGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA

mRNA sequence

ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA

Coding sequence (CDS)

ATGGGAGGAAGATCAAAGTCCTTGAAATGCTTCTCAATTTGCAGCATATTGAAAAGCTGCTGCTTCCCAATGGTGGGAGGAAGAGATAATGATGAAGCTTATTGGGATGAAAGCGCTGAAATTAGAAGAAGGATGTGGCCAAGTGATCAAGATAGTAGAGGTAGATGGGTGGCTGAGCCTGGAATTGATCGTAAAGCTTCTGATTTTATTGCTAGATTCTATGAGTCTCGTGTTTCTGATTCTGAGCAACAAACTTTTGCGGTTTTGAAGGTGTTCTCGATAGATTTGGAGCCATATTTTTGTTCTTGA

Protein sequence

MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEPGIDRKASDFIARFYESRVSDSEQQTFAVLKVFSIDLEPYFCS
Homology
BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6J1C955 (uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009454 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.1e-32
Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGR KS KCFSICSILKSCCFPM G    D  YWDESAEIRRRMWPSD+D RGRWVAEP
Sbjct: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDED-RGRWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKAS FIARFYE+RVSD ++QTFAV
Sbjct: 61 GIDRKASAFIARFYEARVSDPQRQTFAV 86

BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6J1FBH6 (uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC111442555 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGRSKS+KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEP
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKAS FIARFY++RVSD E+QT AV
Sbjct: 61 GIDRKASAFIARFYDARVSDPERQTLAV 83

BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A6P6FMC7 (uncharacterized protein LOC112488971 OS=Ziziphus jujuba OX=326968 GN=LOC112488971 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.7e-17
Identity = 51/86 (59.30%), Postives = 61/86 (70.93%), Query Frame = 0

Query: 3  GRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEPGI 62
          G+ KS   FS C+I K+C         N++AY +E   IRRR++ SD+D RG W AEPGI
Sbjct: 2  GKGKSASLFSFCNIFKAC----FSSGSNEDAYSEEGYYIRRRIYASDED-RGGWTAEPGI 61

Query: 63 DRKASDFIARFYESRVSDSEQQTFAV 89
          DRKAS FIARFYESRVSDSE+QT AV
Sbjct: 62 DRKASAFIARFYESRVSDSERQTLAV 82

BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A0A0LAW1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171730 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.3e-15
Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 0

Query: 25 VGGRD--ND---EAYWDESAEIRRRMWPSDQDSRGRWVAEPGIDRKASDFIARFYESRVS 84
          +GGRD  ND     + D+S EIRRRMWPSD+D   RWVAEPGIDRKAS FIARFYE+RVS
Sbjct: 1  MGGRDYGNDYEGHYFEDQSGEIRRRMWPSDEDRGSRWVAEPGIDRKASAFIARFYEARVS 60

Query: 85 DSEQQTFAV 89
          D E+QT ++
Sbjct: 61 DPERQTLSL 69

BLAST of CmaCh14G015500 vs. ExPASy TrEMBL
Match: A0A5A7U8R2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00130 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 4.4e-15
Identity = 44/68 (64.71%), Postives = 52/68 (76.47%), Query Frame = 0

Query: 25 VGGRDNDEAYW----DESAEIRRRMWPSDQDSRGRWVAEPGIDRKASDFIARFYESRVSD 84
          +GGRD    Y     D+S E+RRRMWPSD+D   RWVAEPGIDRKAS FIARFYE+RVSD
Sbjct: 1  MGGRDYGNDYGGYFEDQSGEMRRRMWPSDEDRGSRWVAEPGIDRKASAFIARFYEARVSD 60

Query: 85 SEQQTFAV 89
           E+QT ++
Sbjct: 61 PERQTLSL 68

BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG6582136.1 (hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 7.1e-44
Identity = 87/88 (98.86%), Postives = 88/88 (100.00%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP
Sbjct: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKASDFIARFYESRVSDSE+QTFAV
Sbjct: 61 GIDRKASDFIARFYESRVSDSERQTFAV 88

BLAST of CmaCh14G015500 vs. NCBI nr
Match: XP_022138231.1 (uncharacterized protein LOC111009454 [Momordica charantia])

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31
Identity = 72/88 (81.82%), Postives = 76/88 (86.36%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGR KS KCFSICSILKSCCFPM G    D  YWDESAEIRRRMWPSD+D RGRWVAEP
Sbjct: 1  MGGR-KSSKCFSICSILKSCCFPMGGRSSEDGGYWDESAEIRRRMWPSDED-RGRWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKAS FIARFYE+RVSD ++QTFAV
Sbjct: 61 GIDRKASAFIARFYEARVSDPQRQTFAV 86

BLAST of CmaCh14G015500 vs. NCBI nr
Match: XP_022935735.1 (uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 uncharacterized protein LOC111800720 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 2.2e-29
Identity = 69/88 (78.41%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGRSKS+KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEP
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKAS FIARFY++RVSD E+QT AV
Sbjct: 61 GIDRKASAFIARFYDARVSDPERQTLAV 83

BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG7029045.1 (hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 137.9 bits (346), Expect = 4.9e-29
Identity = 68/88 (77.27%), Postives = 75/88 (85.23%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEP 60
          MGGRSKS+KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEP
Sbjct: 1  MGGRSKSMKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEP 60

Query: 61 GIDRKASDFIARFYESRVSDSEQQTFAV 89
          GIDRKAS FIARFY++RVSD E+QT +V
Sbjct: 61 GIDRKASAFIARFYDARVSDPERQTLSV 83

BLAST of CmaCh14G015500 vs. NCBI nr
Match: KAG6597601.1 (hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 123.6 bits (309), Expect = 9.6e-25
Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 0

Query: 8  LKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVAEPGIDRKAS 67
          +KCFSICSI KSCCF   GGR  DE YWDES EIRRRMWPSD+D+  RWVAEPGIDRKAS
Sbjct: 1  MKCFSICSIFKSCCFSK-GGR--DEGYWDESGEIRRRMWPSDEDT--RWVAEPGIDRKAS 60

Query: 68 DFIARFYESRVSDSEQQTFAV 89
           FIARFY++RVSD E+QT +V
Sbjct: 61 AFIARFYDARVSDPERQTLSV 76

BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 67.0 bits (162), Expect = 9.9e-12
Identity = 43/89 (48.31%), Postives = 55/89 (61.80%), Query Frame = 0

Query: 1  MGG--RSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDESAEIRRRMWPSDQDSRGRWVA 60
          MGG  RS S K FS+ S  K+        R   +  WD+    R+ M  SD+D R  WVA
Sbjct: 1  MGGKNRSHSSKRFSLFSFFKT----RRSHRVEADGSWDDFGYTRKAM-ASDEDKR-YWVA 60

Query: 61 EPGIDRKASDFIARFYESRVSDSEQQTFA 88
          EPGIDRKAS FIA+F+ +RVS+SE+QT +
Sbjct: 61 EPGIDRKASAFIAKFHATRVSESERQTLS 83

BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0

Query: 32 EAYWDESAEIRRRMWPSDQDSRGRWVAEPGIDRKASDFIARFYESRVSDSEQQT 86
          +A WD+     R+ W SD+D R  WVAEPGIDRKAS FIA+F+ SRVS+SE+QT
Sbjct: 14 DASWDD-VIYTRKAWASDEDKR-YWVAEPGIDRKASAFIAKFHASRVSESERQT 65

BLAST of CmaCh14G015500 vs. TAIR 10
Match: AT1G48325.1 (Expressed protein )

HSP 1 Score: 50.4 bits (119), Expect = 9.6e-07
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = 0

Query: 1  MGGRSKSLKCFSICSILKSCCFPMVGGRDNDEAYWDES--AEIRRRMWPSDQDSRGRWVA 60
          MGG  +  K  S  S++KS        +DN    W+E     +R R+  +D D     +A
Sbjct: 3  MGGHGRRRKSSSSFSVVKSLFARCSKEKDN----WNEERMINVRPRIMTTDDDGCSWTIA 62

Query: 61 EPGIDRKASDFIARFYESRVSDSE 83
          EP IDR+A+ FIA+F+E+ + D+E
Sbjct: 63 EPCIDRRATAFIAKFHETPIQDTE 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C9555.1e-3281.82uncharacterized protein LOC111009454 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6J1FBH61.1e-2978.41uncharacterized protein LOC111442555 OS=Cucurbita moschata OX=3662 GN=LOC1114425... [more]
A0A6P6FMC72.7e-1759.30uncharacterized protein LOC112488971 OS=Ziziphus jujuba OX=326968 GN=LOC11248897... [more]
A0A0A0LAW13.3e-1566.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171730 PE=4 SV=1[more]
A0A5A7U8R24.4e-1564.71Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
KAG6582136.17.1e-4498.86hypothetical protein SDJN03_22138, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022138231.11.1e-3181.82uncharacterized protein LOC111009454 [Momordica charantia][more]
XP_022935735.12.2e-2978.41uncharacterized protein LOC111442555 [Cucurbita moschata] >XP_023540304.1 unchar... [more]
KAG7029045.14.9e-2977.27hypothetical protein SDJN02_10228, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6597601.19.6e-2575.31hypothetical protein SDJN03_10781, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
AT3G05858.19.9e-1248.31unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.14.9e-1161.11unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G48325.19.6e-0735.71Expressed protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33511:SF23SUBFAMILY NOT NAMEDcoord: 2..88
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G015500.1CmaCh14G015500.1mRNA