CmaCh14G014290 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G014290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Membrane-associated 30 kDa protein
Location	Cma_Chr14: 10972256 .. 10973087 (+)
RNA-Seq Expression	CmaCh14G014290
Synteny	CmaCh14G014290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACGAAGAGGGCATAAACAAAACACATGGGAGAAACTTTCAAGATGCCAGATCCAAAACCAAAACGAAATCGCCTTTCGGTTTGAAAAATCTGCGAAAGTCAACCAACGCAGCGTTGATTCACAGACACAACACGAAGATTCAACACTATGGGGGGCGTATCTGTGGCAACGAGGAGAAAGTACCTGGAAATATCCATGAGTGTGCATCAATTGCAGCCCCAAGCGCAGCGCCATCGCAAGAACACGACCAAGTAAATCAAAATTCCTTCCTCAACACGAAACCTACGCTTTCCACGACTCTACTTCCCACCAACAACCCCCACCCATTCGATTTGTCTATAAAATAAAGCCTGTGTCTGTCGCGCATTTCATCGAACACCTTCGCTTCGTTTCACCCATACCTTCTCTCAACTTTGTTTTCTGTCAGACATTTCATCGAACACCTTCCCTTCATTTCGCTGTTCAGTTCTCTAAACTCCATTTTCTCTCAGACATATCATCAAACACCTTCCCATAACTTCTCTGAACCGCAATTTCTCTCAGACATATCATCGAACACCTTGCCTTCATTCTACACGCCACTGCAAGCCACAGCCTTCGGACATGAATTTCGGGAAATTGAGTGCGGCTTTGATGATTCTCGTCGTCGTCGTGGCGTTTTTGAGCAATAGCGCCGCCGTGGACGCCGCCAGAGTGGTGTCCGGAGACTTCTCGAGCGTCAGTAACTTGGAGATGTACCCGACGGCGTACGAGCAGGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGTCCCGGCCACTGA

mRNA sequence

CACAACGAAGAGGGCATAAACAAAACACATGGGAGAAACTTTCAAGATGCCAGATCCAAAACCAAAACGAAATCGCCTTTCGGTTTGAAAAATCTGCGAAAGTCAACCAACGCAGCGTTGATTCACAGACACAACACGAAGATTCAACACTATGGGGGGCGTATCTGTGGCAACGAGGAGAAAGTACCTGGAAATATCCATGAGTGTGCATCAATTGCAGCCCCAAGCGCAGCGCCATCGCAAGAACACGACCAAACATATCATCGAACACCTTGCCTTCATTCTACACGCCACTGCAAGCCACAGCCTTCGGACATGAATTTCGGGAAATTGAGTGCGGCTTTGATGATTCTCGTCGTCGTCGTGGCGTTTTTGAGCAATAGCGCCGCCGTGGACGCCGCCAGAGTGGTGTCCGGAGACTTCTCGAGCGTCAGTAACTTGGAGATGTACCCGACGGCGTACGAGCAGGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGTCCCGGCCACTGA

Coding sequence (CDS)

CACAACGAAGAGGGCATAAACAAAACACATGGGAGAAACTTTCAAGATGCCAGATCCAAAACCAAAACGAAATCGCCTTTCGGTTTGAAAAATCTGCGAAAGTCAACCAACGCAGCGTTGATTCACAGACACAACACGAAGATTCAACACTATGGGGGGCGTATCTGTGGCAACGAGGAGAAAGTACCTGGAAATATCCATGAGTGTGCATCAATTGCAGCCCCAAGCGCAGCGCCATCGCAAGAACACGACCAAACATATCATCGAACACCTTGCCTTCATTCTACACGCCACTGCAAGCCACAGCCTTCGGACATGAATTTCGGGAAATTGAGTGCGGCTTTGATGATTCTCGTCGTCGTCGTGGCGTTTTTGAGCAATAGCGCCGCCGTGGACGCCGCCAGAGTGGTGTCCGGAGACTTCTCGAGCGTCAGTAACTTGGAGATGTACCCGACGGCGTACGAGCAGGCGAAGAATACGGTGTCGTGTTGGCTCGGCCGCTTGTCGTCCGGCCCCAGCCCCAAAGGTCCCGGCCACTGA

Protein sequence

HNEEGINKTHGRNFQDARSKTKTKSPFGLKNLRKSTNAALIHRHNTKIQHYGGRICGNEEKVPGNIHECASIAAPSAAPSQEHDQTYHRTPCLHSTRHCKPQPSDMNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWLGRLSSGPSPKGPGH

Homology

[Close]

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL
Match: A0A0A0KU27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011070 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 9.0e-24
Identity = 58/74 (78.38%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           MNFGKLS  L++LVV +  LSNS+ VDAARVV GDF+SV++LEMYP+AYEQAK+TVSCWL
Sbjct: 1   MNFGKLSVLLIVLVVALTLLSNSSTVDAARVVPGDFASVNHLEMYPSAYEQAKHTVSCWL 60

Query: 166 GRLSSGPSPKGPGH 180
           GRLSSGPSPKGPGH
Sbjct: 61  GRLSSGPSPKGPGH 74

[Close]

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL
Match: A0A5B7B952 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034139 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 7.2e-13
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           MNF +++A L+I V+ VA +  +  + A RV+S DF+  ++L  YP+ YE+AK T++CWL
Sbjct: 30  MNFQRMNALLIIFVIFVAIMGQARVLQATRVLSEDFAGANHLATYPSTYEKAKYTMACWL 89

Query: 166 GRLSSGPSPKGPGH 180
            RL+SGPSPKGPGH
Sbjct: 90  ERLASGPSPKGPGH 103

[Close]

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL
Match: A0A5C7IW37 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001325 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 3.6e-12
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           MN   L   L++LV+ VA LS+   V+A RV+  DF+S ++LE Y + YE+AK T+ CWL
Sbjct: 1   MNARNLGTLLIVLVISVAILSH-VGVEATRVLPEDFASENHLETYSSVYEKAKTTMGCWL 60

Query: 166 GRLSSGPSPKGPGH 180
           GRL+SGPSPKGPGH
Sbjct: 61  GRLASGPSPKGPGH 73

[Close]

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL
Match: A0A2P2J3U6 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 6.1e-12
Identity = 38/74 (51.35%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           M+F K++   ++ V+ +A LS    V+AAR +  DF+  ++LE Y + YE+AKNT++CWL
Sbjct: 1   MSFQKVATLFLVFVISLAILS-QVKVEAARALPEDFAGAAHLETYSSVYEKAKNTMACWL 60

Query: 166 GRLSSGPSPKGPGH 180
           GRL+SGPSPKGPGH
Sbjct: 61  GRLASGPSPKGPGH 73

[Close]

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL
Match: W9R3D2 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018125 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 7.9e-12
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 101 PQPS--DMNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAK 160
           P PS  DMN  K+++ L+I V+ VA L+   + +A RV+S DF   ++LE YP+ YE AK
Sbjct: 54  PSPSGPDMNSAKITSLLIIFVLAVAVLNLVGSAEAGRVLSEDFGGENHLEKYPSVYENAK 113

Query: 161 NTVSCWLGRLSSGPSPKGPGH 180
            +++ WL RLSSGPSP GPGH
Sbjct: 114 QSLTFWLQRLSSGPSPSGPGH 134

[Close]

BLAST of CmaCh14G014290 vs. NCBI nr
Match: KAG6582005.1 (Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-43
Identity = 91/95 (95.79%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 85  QTYHRTPCLHSTRHCKPQPSDMNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSV 144
           +TYHRTPCLHSTRHCKPQPS+MNFGKL AALMILVVVVAFLSNSAAVDAARVV GDFSSV
Sbjct: 221 KTYHRTPCLHSTRHCKPQPSEMNFGKLGAALMILVVVVAFLSNSAAVDAARVVPGDFSSV 280

Query: 145 SNLEMYPTAYEQAKNTVSCWLGRLSSGPSPKGPGH 180
           SNLEMYPTAYEQAKNTVSCWLGRLSSGPSPKGPGH
Sbjct: 281 SNLEMYPTAYEQAKNTVSCWLGRLSSGPSPKGPGH 315

[Close]

BLAST of CmaCh14G014290 vs. NCBI nr
Match: KGN53012.2 (hypothetical protein Csa_023800, partial [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 4.7e-27
Identity = 67/103 (65.05%), Postives = 80/103 (77.67%), Query Frame = 0


Query: 77  AAPSQEHDQTYHRTPCLHSTRHCKPQPSDMNFGKLSAALMILVVVVAFLSNSAAVDAARV 136
           A+ +    QT+  T  L S  H  P+ S MNFGKLS  L++LVV +  LSNS+ VDAARV
Sbjct: 13  ASLNPNFSQTHRPTHYLRSRFHFNPETSKMNFGKLSVLLIVLVVALTLLSNSSTVDAARV 72

Query: 137 VSGDFSSVSNLEMYPTAYEQAKNTVSCWLGRLSSGPSPKGPGH 180
           V GDF+SV++LEMYP+AYEQAK+TVSCWLGRLSSGPSPKGPGH
Sbjct: 73  VPGDFASVNHLEMYPSAYEQAKHTVSCWLGRLSSGPSPKGPGH 115

[Close]

BLAST of CmaCh14G014290 vs. NCBI nr
Match: KAG6597679.1 (hypothetical protein SDJN03_10859, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.4 bits (285), Expect = 1.0e-21
Identity = 58/74 (78.38%), Postives = 63/74 (85.14%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           MNF KL   LMILVV VAFLSNS AVDAAR+V GDF+S ++LEMYP+AYE AKNTVSCWL
Sbjct: 1   MNFRKLGVVLMILVVAVAFLSNSPAVDAARIVPGDFASANHLEMYPSAYEHAKNTVSCWL 60

Query: 166 GRLSSGPSPKGPGH 180
           GRLSSGPSPKG  H
Sbjct: 61  GRLSSGPSPKGFHH 74

[Close]

BLAST of CmaCh14G014290 vs. NCBI nr
Match: TXG72746.1 (hypothetical protein EZV62_001325 [Acer yangbiense])

HSP 1 Score: 81.6 bits (200), Expect = 7.3e-12
Identity = 41/74 (55.41%), Postives = 54/74 (72.97%), Query Frame = 0


Query: 106 MNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAKNTVSCWL 165
           MN   L   L++LV+ VA LS+   V+A RV+  DF+S ++LE Y + YE+AK T+ CWL
Sbjct: 1   MNARNLGTLLIVLVISVAILSH-VGVEATRVLPEDFASENHLETYSSVYEKAKTTMGCWL 60

Query: 166 GRLSSGPSPKGPGH 180
           GRL+SGPSPKGPGH
Sbjct: 61  GRLASGPSPKGPGH 73

[Close]

BLAST of CmaCh14G014290 vs. NCBI nr
Match: EXB55198.1 (hypothetical protein L484_018125 [Morus notabilis])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-11
Identity = 41/81 (50.62%), Postives = 56/81 (69.14%), Query Frame = 0


Query: 101 PQPS--DMNFGKLSAALMILVVVVAFLSNSAAVDAARVVSGDFSSVSNLEMYPTAYEQAK 160
           P PS  DMN  K+++ L+I V+ VA L+   + +A RV+S DF   ++LE YP+ YE AK
Sbjct: 54  PSPSGPDMNSAKITSLLIIFVLAVAVLNLVGSAEAGRVLSEDFGGENHLEKYPSVYENAK 113

Query: 161 NTVSCWLGRLSSGPSPKGPGH 180
            +++ WL RLSSGPSP GPGH
Sbjct: 114 QSLTFWLQRLSSGPSPSGPGH 134

The following BLAST results are available for this feature:

BLAST of CmaCh14G014290 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G014290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU27	9.0e-24	78.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G011070 PE=4 SV=1	[more]
A0A5B7B952	7.2e-13	51.35	Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_034139...	[more]
A0A5C7IW37	3.6e-12	55.41	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001325 PE=4 SV=1	[more]
A0A2P2J3U6	6.1e-12	51.35	Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
W9R3D2	7.9e-12	50.62	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018125 PE=4 SV=1	[more]

BLAST of CmaCh14G014290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6582005.1	1.2e-43	95.79	Membrane-associated 30 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
KGN53012.2	4.7e-27	65.05	hypothetical protein Csa_023800, partial [Cucumis sativus]	[more]
KAG6597679.1	1.0e-21	78.38	hypothetical protein SDJN03_10859, partial [Cucurbita argyrosperma subsp. sorori...	[more]
TXG72746.1	7.3e-12	55.41	hypothetical protein EZV62_001325 [Acer yangbiense]	[more]
EXB55198.1	1.6e-11	50.62	hypothetical protein L484_018125 [Morus notabilis]	[more]

BLAST of CmaCh14G014290 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..19
None	No IPR available	PANTHER	PTHR37245:SF4	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 106..179
IPR040273	PAMP-induced secreted peptide 1	PANTHER	PTHR37245	PAMP-INDUCED SECRETED PEPTIDE 1	coord: 106..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G014290.1	CmaCh14G014290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
cellular_component	GO:0016020	membrane