CmaCh14G013460 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTCTAGACAAGTGTAGAGGGCCACGCATGCAATTAAAATCTCCATCTTCATCTCCCCCACTTGCCAACTAAATTCCACCATCCATTTTCAAAACAATACCCAAAATAAACACCTTCCGCCACCCATGTCTTCCATTCTCACCTCTCAAGGTCTCGTCATTGCCACCGCCATGGTCGTCTCCTCCACCGCTCTCTTCCTCGCCTTCTCCAAGCACCACAAGATCAATCCCCTCCCTTCCAAAGCCCTTCTTTCTTCCTGCTTTTCCTCTGGTAAATCCCCTTTTCTTTTCTTCAATCATGTTTTGAACATAAGAAGCTGAATCTTGGTGGGTTTTTGATGTTGAATTAACTTAAAACTTGATGGGTTTTTGTGAAGTTTGTGTTTTTAGTGTTGTTTTGAAGATTTGGGGCTGAAATTTTGGTGGGTTTTTGATGTTTTTGTGTTTAGACAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGAGTGGGTATGGCGGAAAGAAGAAGAACAACAACAAGTAGCAGCTGCTGTCGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATGCTCAAACAACGATCGCTAAGAACCCAATGTTCATTTTGA TTCTAGACAAGTGTAGAGGGCCACGCATGCAATTAAAATCTCCATCTTCATCTCCCCCACTTGCCAACTAAATTCCACCATCCATTTTCAAAACAATACCCAAAATAAACACCTTCCGCCACCCATGTCTTCCATTCTCACCTCTCAAGGTCTCGTCATTGCCACCGCCATGGTCGTCTCCTCCACCGCTCTCTTCCTCGCCTTCTCCAAGCACCACAAGATCAATCCCCTCCCTTCCAAAGCCCTTCTTTCTTCCTGCTTTTCCTCTGACAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGAGTGGGTATGGCGGAAAGAAGAAGAACAACAACAAGTAGCAGCTGCTGTCGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATGCTCAAACAACGATCGCTAAGAACCCAATGTTCATTTTGA ATGTCTTCCATTCTCACCTCTCAAGGTCTCGTCATTGCCACCGCCATGGTCGTCTCCTCCACCGCTCTCTTCCTCGCCTTCTCCAAGCACCACAAGATCAATCCCCTCCCTTCCAAAGCCCTTCTTTCTTCCTGCTTTTCCTCTGACAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGGTGAGATTTGCAGAGGATGTGAAGGAGCCAAAAGGGAATGGAGAAGAGTACAGAAGAGAGCACGATGAGAGAGTGGGTATGGCGGAAAGAAGAAGAACAACAACAAGTAGCAGCTGCTGTCGAAATGAAATTCCTGCAAATCGTGTTGCTTTGTATAATGGAATGCTCAAACAACGATCGCTAAGAACCCAATGTTCATTTTGA MSSILTSQGLVIATAMVVSSTALFLAFSKHHKINPLPSKALLSSCFSSDKRKKKKKKKKKVRFAEDVKEPKGNGEEYRREHDERVGMAERRRTTTSSSCCRNEIPANRVALYNGMLKQRSLRTQCSF Homology
BLAST of CmaCh14G013460 vs. ExPASy TrEMBL
Match: A0A6J1IWF1 (uncharacterized protein LOC111479184 OS=Cucurbita maxima OX=3661 GN=LOC111479184 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 6.1e-59 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh14G013460 vs. ExPASy TrEMBL
Match: A0A6J1GVB7 (uncharacterized protein LOC111457756 OS=Cucurbita moschata OX=3662 GN=LOC111457756 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 7.3e-52 Identity = 119/129 (92.25%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmaCh14G013460 vs. ExPASy TrEMBL
Match: A0A6J1K8H4 (uncharacterized protein LOC111493207 OS=Cucurbita maxima OX=3661 GN=LOC111493207 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 2.0e-41 Identity = 99/133 (74.44%), Postives = 112/133 (84.21%), Query Frame = 0
BLAST of CmaCh14G013460 vs. ExPASy TrEMBL
Match: A0A6J1GAK8 (uncharacterized protein LOC111452283 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111452283 PE=4 SV=1) HSP 1 Score: 177.2 bits (448), Expect = 4.4e-41 Identity = 100/135 (74.07%), Postives = 114/135 (84.44%), Query Frame = 0
BLAST of CmaCh14G013460 vs. ExPASy TrEMBL
Match: A0A1S3BY99 (uncharacterized protein LOC103494703 OS=Cucumis melo OX=3656 GN=LOC103494703 PE=4 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.7e-37 Identity = 98/131 (74.81%), Postives = 110/131 (83.97%), Query Frame = 0
BLAST of CmaCh14G013460 vs. NCBI nr
Match: XP_022979503.1 (uncharacterized protein LOC111479184 [Cucurbita maxima]) HSP 1 Score: 236.5 bits (602), Expect = 1.3e-58 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of CmaCh14G013460 vs. NCBI nr
Match: XP_023528178.1 (uncharacterized protein LOC111791169 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 220.3 bits (560), Expect = 9.4e-54 Identity = 120/128 (93.75%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of CmaCh14G013460 vs. NCBI nr
Match: XP_022955913.1 (uncharacterized protein LOC111457756 [Cucurbita moschata]) HSP 1 Score: 213.0 bits (541), Expect = 1.5e-51 Identity = 119/129 (92.25%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of CmaCh14G013460 vs. NCBI nr
Match: KAG7018354.1 (hypothetical protein SDJN02_20222 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 204.9 bits (520), Expect = 4.1e-49 Identity = 114/127 (89.76%), Postives = 120/127 (94.49%), Query Frame = 0
BLAST of CmaCh14G013460 vs. NCBI nr
Match: XP_038901306.1 (uncharacterized protein LOC120088227 [Benincasa hispida]) HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43 Identity = 105/132 (79.55%), Postives = 116/132 (87.88%), Query Frame = 0
BLAST of CmaCh14G013460 vs. TAIR 10
Match: AT1G52565.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 114.8 bits (286), Expect = 5.2e-26 Identity = 69/129 (53.49%), Postives = 94/129 (72.87%), Query Frame = 0
BLAST of CmaCh14G013460 vs. TAIR 10
Match: AT3G15760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52565.1); Has 42 Blast hits to 42 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 88.2 bits (217), Expect = 5.2e-18 Identity = 62/127 (48.82%), Postives = 80/127 (62.99%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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