CmaCh14G012810 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G012810
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	transcription factor bHLH87-like
Location	Cma_Chr14: 10133846 .. 10134900 (+)
RNA-Seq Expression	CmaCh14G012810
Synteny	CmaCh14G012810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAATTCAATATACTTTATGAGGACATCTCATTGCTCCAAATCTTCATAAATACGAACACCTCCACTCCCCCCACCAAATCGACAAGGCCCAAAAACGAAGAACCCTTCTCCCTTTTGTCTTCTCCTCAAACTTCAAAACCCTTCCATAGCCTGTAATTATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGTTTAATATTTAACGTTACCATGCAATATTAGCTTTAGATTTCCATGCAATAACCCACGAGATTTTGTTACGTAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAATATCATAATCTATCATCTTTATCAATAAAATATTAATCTATGATCTTCGCACCGTTTAGAGAATTTTCCTTACAGGTTGTGTGCTTCAACTCCAACGAGTATAACTCACATACATGACG

mRNA sequence

ACAATTCAATATACTTTATGAGGACATCTCATTGCTCCAAATCTTCATAAATACGAACACCTCCACTCCCCCCACCAAATCGACAAGGCCCAAAAACGAAGAACCCTTCTCCCTTTTGTCTTCTCCTCAAACTTCAAAACCCTTCCATAGCCTGTAATTATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAATATCATAATCTATCATCTTTATCAATAAAATATTAATCTATGATCTTCGCACCGTTTAGAGAATTTTCCTTACAGGTTGTGTGCTTCAACTCCAACGAGTATAACTCACATACATGACG

Coding sequence (CDS)

ATGGATGATTTGCTTTGGAATGGCTCGTGGAGCAACGAAGAACACAACGGTTGTAACGAAAGCTTATTCGTCTCCGATGACTCGAGTCGTTGTTCGAGTCTTCCATTACAAGAGCTTCAGATGGTTGCAAGAATGTCGAAGTTTCCAGAGATGGCAAAGGATTCAGAGTCTTGGTCGGAGGGAGATTTGTTGGAAGAGCTTGAAAATGACAAAGGAATTGCACCAAAGGGTGGAGTTTTGGACATTTTTGAAAACCACAAGTCAAAACAACAAAACTCTACAACTTCATCTTCGAACAACGACGAGGTCAAGCCTTTTAATCGAGATCGAGCCATGTCACAAATGAAGGAATTGGTATACTATGCAGCGGTGTTTAGGCCAGTGAGCTCGGGATCAGAGACGGTGAAGAAGAAGAGGAGGAGGAACGTTAATACATCGAAGGAGCCACAGACGGTGGCAGCGAGGAAACGAAGGGAGAAGATAAGCGAAAAAATTAGGGCTTTGCAGAGGTTAGTTCCTGGTGGGAGCAAAATGGACACTGCCTCCATGCTGGATGAGGCAGCAAGCTATCTCAAGTTCCTTAGGGCACAAATCAAAGCACTAGAAGGGTTAAGCTACAAACTTGGATCCATTGATTGTCTCTCAACTTCCACATCTTTCAACCCTCCTTTTTCCACAATTAATGCTTATTTTCCTCTCTAA

Protein sequence

MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSEGDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL

Homology

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BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-30
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 76  KGGVLDIFENHKSKQQNSTT-----SSSN---------NDEVKPFNRDRAMSQMKELVYY 135
           KGG   I++ ++SK +   T      SSN         +D V+P     A++QMKE++Y 
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEP--DAEAIAQMKEMIYR 253

Query: 136 AAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTA 195
           AA FRPV+ G E V+K +R+NV  S +PQTVAAR+RRE+ISEKIR LQ LVPGG+KMDTA
Sbjct: 254 AAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTA 313

Query: 196 SMLDEAASYLKFLRAQIKALEGLSYKLG--SIDCLSTSTSF 221
           SMLDEAA+YLKFLRAQ+KALE L  KL   ++   S  TSF
Sbjct: 314 SMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSF 352

[Close]

BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot
Match: A0A0P0WQ90 (Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=LF PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 5.6e-23
Identity = 60/106 (56.60%), Postives = 79/106 (74.53%), Query Frame = 0


Query: 111 AMSQMKELVYYAAVFRPVSSGSET------------VKKKRRRNVNTSKEPQTVAARKRR 170
           A++Q+KE++Y AA  RPV+ G                ++ RR+NV  S +PQTVAAR RR
Sbjct: 257 AIAQVKEMIYRAAAMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRR 316

Query: 171 EKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALEGL 205
           E++SE++R LQRLVPGGSKMDTA+MLDEAASYLKFL++Q++ALE L
Sbjct: 317 ERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETL 362

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BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.6e-23
Identity = 64/136 (47.06%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 67  LENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFR 126
           L N   I+P      +F + +        ++SNN+     N    M+ M+E+++  AV +
Sbjct: 63  LTNPSSISPNTAYSSVFLDKR--------NNSNNN-----NNGTNMAAMREMIFRIAVMQ 122

Query: 127 PVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDE 186
           P+    E VK  +RRNV  SK+PQ+VAAR RRE+ISE+IR LQRLVPGG+KMDTASMLDE
Sbjct: 123 PIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 182

Query: 187 AASYLKFLRAQIKALE 203
           A  Y+KFL+ Q+++LE
Sbjct: 183 AIHYVKFLKKQVQSLE 185

[Close]

BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.8e-22
Identity = 54/91 (59.34%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 112 MSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRL 171
           M+ M+E+++  AV +P+    E+VK  +R+NV  SK+PQ+VAAR RRE+ISE+IR LQRL
Sbjct: 92  MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151

Query: 172 VPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           VPGG+KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 101 DEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREK 160
           DE + ++ D  M  MKE+ Y  AV +PV     TV K  RRNV  S +PQTV AR+RRE+
Sbjct: 76  DEDEEYDED--MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRER 135

Query: 161 ISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           ISEKIR L+R+VPGG+KMDTASMLDEA  Y KFL+ Q++ L+
Sbjct: 136 ISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL
Match: A0A6J1IXB7 (transcription factor bHLH87-like OS=Cucurbita maxima OX=3661 GN=LOC111480004 PE=4 SV=1)

HSP 1 Score: 449.9 bits (1156), Expect = 6.5e-123
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE
Sbjct: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY
Sbjct: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 234
           ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 233

[Close]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL
Match: A0A6J1GXV2 (transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111457836 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.7e-102
Identity = 204/233 (87.55%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEE N CNESLFV DD SRCS+LPLQELQ+V++MS+ PEMAKD     E
Sbjct: 1   MDDLLWNGSWSNEEGNRCNESLFVLDDPSRCSNLPLQELQIVSKMSRLPEMAKD-----E 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           G     +E+DKGIAPKGGVLDIFEN K KQQNSTTSSSNND+VKPFNRDRAMSQMKELVY
Sbjct: 61  G---ASMEDDKGIAPKGGVLDIFENQKPKQQNSTTSSSNNDQVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETV+KKRRRNV TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 234
           ASMLDEAASYLKFLRAQIKALEG SYKLGSIDCLSTSTSFNPPF TINAYFPL
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGFSYKLGSIDCLSTSTSFNPPFPTINAYFPL 225

[Close]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL
Match: A0A0A0LDH7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 7.5e-71
Identity = 170/269 (63.20%), Postives = 188/269 (69.89%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           MDDLLWN SWSNEE++G  ESLFVSDD SRCSS PLQELQ VAR+   PE          
Sbjct: 1   MDDLLWNSSWSNEENSGSEESLFVSDDPSRCSSPPLQELQTVARILGLPEIDTSTRETRV 60

Query: 61  --MAKDS-------ESW-----SEGDLLEELENDKGIAPKGGVLDIFENHKSKQQ----- 120
             +A+DS       +SW     + G L E LENDKGIA KGG LDI EN K  QQ     
Sbjct: 61  GKLAEDSKVLFECEKSWPMEVTTGGVLFEVLENDKGIASKGGFLDILENQKPNQQNTIIE 120

Query: 121 ------NSTT-------SSSNNDEV-KPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKK 180
                 NSTT       SSSN +E+ +  +RD+ +SQMKE +YYAAVFRPV+ G ETV+K
Sbjct: 121 NQPSSTNSTTLSPSPSPSSSNIEEIEQAVDRDQVVSQMKEWIYYAAVFRPVNLGLETVEK 180

Query: 181 KRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQ 227
           KRR+NV  SKEPQTVAARKRREKISEKIR LQRLVPGGSKMD  SMLDEAASYLKFLRAQ
Sbjct: 181 KRRKNVKMSKEPQTVAARKRREKISEKIRVLQRLVPGGSKMDIGSMLDEAASYLKFLRAQ 240

[Close]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL
Match: A0A5D3BVP3 (Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G001900 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 167/268 (62.31%), Postives = 186/268 (69.40%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           M+DLLWN SWSNEE +G  ESLFVSD   RCSS PLQELQ VAR+   PE          
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  --MAKDS-----------ESWSEGDLLEELENDKGIAPKGGVLDIFENHKSKQQ------ 120
             +AKDS           E  + G L E LEND+GIAPKGG LDIFEN K  QQ      
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 -----NSTT-------SSSNNDEVKP-FNRDRAMSQMKELVYYAAVFRPVSSGSETVKKK 180
                NSTT       SSS  +E++   ++DR +SQMK+ +YYAAVF+PV+ G ETV+KK
Sbjct: 121 LPSSTNSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKK 180

Query: 181 RRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQI 227
           RRRNV  SKEPQTVAARKRREKISEKIR L+RLVPGGSKMD ASMLDEAASYLKFLRAQI
Sbjct: 181 RRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQI 240

[Close]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL
Match: A0A1S3BIP2 (transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 1.8e-69
Identity = 167/268 (62.31%), Postives = 186/268 (69.40%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPE---------- 60
           M+DLLWN SWSNEE +G  ESLFVSD   RCSS PLQELQ VAR+   PE          
Sbjct: 1   MEDLLWNSSWSNEEDSGSEESLFVSDVPGRCSSPPLQELQTVARILGLPEIDTRTPEIRV 60

Query: 61  --MAKDS-----------ESWSEGDLLEELENDKGIAPKGGVLDIFENHKSKQQ------ 120
             +AKDS           E  + G L E LEND+GIAPKGG LDIFEN K  QQ      
Sbjct: 61  EKLAKDSNVFEREKSCPVEVTTGGVLFEVLENDQGIAPKGGFLDIFENQKLSQQNPIIEK 120

Query: 121 -----NSTT-------SSSNNDEVKP-FNRDRAMSQMKELVYYAAVFRPVSSGSETVKKK 180
                NSTT       SSS  +E++   ++DR +SQMK+ +YYAAVF+PV+ G ETV+KK
Sbjct: 121 LPSSTNSTTPSPSPSSSSSYIEEIEQVVDQDRFVSQMKQWIYYAAVFKPVNLGLETVEKK 180

Query: 181 RRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQI 227
           RRRNV  SKEPQTVAARKRREKISEKIR L+RLVPGGSKMD ASMLDEAASYLKFLRAQI
Sbjct: 181 RRRNVKVSKEPQTVAARKRREKISEKIRVLRRLVPGGSKMDIASMLDEAASYLKFLRAQI 240

[Close]

BLAST of CmaCh14G012810 vs. NCBI nr
Match: XP_022980720.1 (transcription factor bHLH87-like [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 1.3e-122
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE
Sbjct: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY
Sbjct: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 234
           ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 233

[Close]

BLAST of CmaCh14G012810 vs. NCBI nr
Match: XP_023528594.1 (transcription factor bHLH87-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 382.9 bits (982), Expect = 2.0e-102
Identity = 205/233 (87.98%), Postives = 211/233 (90.56%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEE N CNESLFVS D   CS LPLQELQ+VAR  +  E+AKD     E
Sbjct: 1   MDDLLWNGSWSNEEDNRCNESLFVSGDPRHCSILPLQELQIVARTLRLREVAKD-----E 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           G  +EELENDKGIAPKGGVLDIFEN K KQQNSTTSSSNND+VKPFNRDRAMSQMKELVY
Sbjct: 61  GASMEELENDKGIAPKGGVLDIFENQKPKQQNSTTSSSNNDQVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETV+KKRRRNV TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 234
           ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPF TINAYFPL
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFPTINAYFPL 228

[Close]

BLAST of CmaCh14G012810 vs. NCBI nr
Match: XP_022956014.1 (transcription factor bHLH87-like [Cucurbita moschata])

HSP 1 Score: 382.1 bits (980), Expect = 3.4e-102
Identity = 204/233 (87.55%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEE N CNESLFV DD SRCS+LPLQELQ+V++MS+ PEMAKD     E
Sbjct: 1   MDDLLWNGSWSNEEGNRCNESLFVLDDPSRCSNLPLQELQIVSKMSRLPEMAKD-----E 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           G     +E+DKGIAPKGGVLDIFEN K KQQNSTTSSSNND+VKPFNRDRAMSQMKELVY
Sbjct: 61  G---ASMEDDKGIAPKGGVLDIFENQKPKQQNSTTSSSNNDQVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETV+KKRRRNV TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDCLSTSTSFNPPFSTINAYFPL 234
           ASMLDEAASYLKFLRAQIKALEG SYKLGSIDCLSTSTSFNPPF TINAYFPL
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGFSYKLGSIDCLSTSTSFNPPFPTINAYFPL 225

[Close]

BLAST of CmaCh14G012810 vs. NCBI nr
Match: KAG6581865.1 (Transcription factor basic helix-loop-helix 87, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.0 bits (894), Expect = 3.2e-92
Identity = 189/222 (85.14%), Postives = 202/222 (90.99%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARMSKFPEMAKDSESWSE 60
           MDDLLWNGSWSNEE N CNESLFV DD  RCS+LPLQELQ+VA+MS+ PEMAKD     E
Sbjct: 1   MDDLLWNGSWSNEEGNRCNESLFVPDDPCRCSNLPLQELQIVAKMSRLPEMAKD-----E 60

Query: 61  GDLLEELENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVY 120
           GD    +E+DKGIAPKGGVLDIFEN K KQQNSTTSSSNND+VKPFNRDRAMSQMKELVY
Sbjct: 61  GD---SMEDDKGIAPKGGVLDIFENQKPKQQNSTTSSSNNDQVKPFNRDRAMSQMKELVY 120

Query: 121 YAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180
           YAAVFRPVSSGSETV+KKRRRNV TSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT
Sbjct: 121 YAAVFRPVSSGSETVEKKRRRNVKTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDT 180

Query: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGSIDC-LSTSTSFN 222
           ASMLDEAASYLKFLRAQIKALEGLSYKLG+IDC +S+S +F+
Sbjct: 181 ASMLDEAASYLKFLRAQIKALEGLSYKLGAIDCWISSSLTFS 214

[Close]

BLAST of CmaCh14G012810 vs. NCBI nr
Match: XP_038902463.1 (transcription factor bHLH87-like [Benincasa hispida])

HSP 1 Score: 296.2 bits (757), Expect = 2.5e-76
Identity = 176/267 (65.92%), Postives = 194/267 (72.66%), Query Frame = 0


Query: 1   MDDLLWNGSWSNEEHNGCNESLFVSDDSSRCSSLPLQELQMVARM------------SKF 60
           MDDLLWNGSWS EE   C ESLFVS+D SRCSS PLQELQ VAR+             K 
Sbjct: 1   MDDLLWNGSWSIEEDRNCEESLFVSNDPSRCSSPPLQELQTVARILGLSEINTPAPEMKV 60

Query: 61  PEMAKDS-------ESW-----SEGDLLEELENDKGIAPKGGVLDIFENHKSKQQNS--- 120
            ++AKDS       +SW     S G L +E+ENDKG AP+GG LDIFEN K KQQNS   
Sbjct: 61  EKLAKDSKVLFEREKSWPVGASSGGVLFDEVENDKGSAPQGGFLDIFENQKPKQQNSIIE 120

Query: 121 ---------------TTSSSNNDEV-KPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKK 180
                          + SSSNNDEV +P +RD+ +SQMKE +YYAAVFRPV+ GSETV+K
Sbjct: 121 KQPSSANSINPSLSPSPSSSNNDEVERPVDRDQLVSQMKECIYYAAVFRPVNLGSETVEK 180

Query: 181 KRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQ 225
           KRRRNV  SKEPQT+AAR RREKISEKIR LQ LVPGG+KMD ASMLDEAASYLKFLRAQ
Sbjct: 181 KRRRNVKMSKEPQTIAARIRREKISEKIRVLQSLVPGGNKMDIASMLDEAASYLKFLRAQ 240

[Close]

BLAST of CmaCh14G012810 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 8.9e-32
Identity = 87/161 (54.04%), Postives = 110/161 (68.32%), Query Frame = 0


Query: 76  KGGVLDIFENHKSKQQNSTT-----SSSN---------NDEVKPFNRDRAMSQMKELVYY 135
           KGG   I++ ++SK +   T      SSN         +D V+P     A++QMKE++Y 
Sbjct: 194 KGGFKLIYDENQSKSKKPRTEKERGGSSNISFQHSTCLSDNVEP--DAEAIAQMKEMIYR 253

Query: 136 AAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTA 195
           AA FRPV+ G E V+K +R+NV  S +PQTVAAR+RRE+ISEKIR LQ LVPGG+KMDTA
Sbjct: 254 AAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGGTKMDTA 313

Query: 196 SMLDEAASYLKFLRAQIKALEGLSYKLG--SIDCLSTSTSF 221
           SMLDEAA+YLKFLRAQ+KALE L  KL   ++   S  TSF
Sbjct: 314 SMLDEAANYLKFLRAQVKALENLRPKLDQTNLSFSSAPTSF 352

[Close]

BLAST of CmaCh14G012810 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 6.8e-24
Identity = 64/136 (47.06%), Postives = 89/136 (65.44%), Query Frame = 0


Query: 67  LENDKGIAPKGGVLDIFENHKSKQQNSTTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFR 126
           L N   I+P      +F + +        ++SNN+     N    M+ M+E+++  AV +
Sbjct: 63  LTNPSSISPNTAYSSVFLDKR--------NNSNNN-----NNGTNMAAMREMIFRIAVMQ 122

Query: 127 PVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRLVPGGSKMDTASMLDE 186
           P+    E VK  +RRNV  SK+PQ+VAAR RRE+ISE+IR LQRLVPGG+KMDTASMLDE
Sbjct: 123 PIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDE 182

Query: 187 AASYLKFLRAQIKALE 203
           A  Y+KFL+ Q+++LE
Sbjct: 183 AIHYVKFLKKQVQSLE 185

[Close]

BLAST of CmaCh14G012810 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 2.0e-23
Identity = 54/91 (59.34%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 112 MSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREKISEKIRALQRL 171
           M+ M+E+++  AV +P+    E+VK  +R+NV  SK+PQ+VAAR RRE+ISE+IR LQRL
Sbjct: 92  MAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRL 151

Query: 172 VPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           VPGG+KMDTASMLDEA  Y+KFL+ Q+++LE
Sbjct: 152 VPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of CmaCh14G012810 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 9.8e-23
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 0


Query: 101 DEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTVAARKRREK 160
           DE + ++ D  M  MKE+ Y  AV +PV     TV K  RRNV  S +PQTV AR+RRE+
Sbjct: 76  DEDEEYDED--MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRER 135

Query: 161 ISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKALE 203
           ISEKIR L+R+VPGG+KMDTASMLDEA  Y KFL+ Q++ L+
Sbjct: 136 ISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of CmaCh14G012810 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 101.7 bits (252), Expect = 8.3e-22
Identity = 59/109 (54.13%), Postives = 74/109 (67.89%), Query Frame = 0


Query: 93  STTSSSNNDEVKPFNRDRAMSQMKELVYYAAVFRPVSSGSETVKKKRRRNVNTSKEPQTV 152
           S     + DE +P      +  MKE++Y  A  + V     TVKK +RRNV  S +PQ+V
Sbjct: 76  SGDQEDDEDEEEPLEE---LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSV 135

Query: 153 AARKRREKISEKIRALQRLVPGGSKMDTASMLDEAASYLKFLRAQIKAL 202
           AAR RRE+ISE+IR LQRLVPGG+KMDTASMLDEA  Y+KFL+ QI+ L
Sbjct: 136 AARHRRERISERIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLL 181

The following BLAST results are available for this feature:

BLAST of CmaCh14G012810 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S3D2	1.2e-30	54.04	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]
A0A0P0WQ90	5.6e-23	56.60	Transcription factor LATE FLOWERING OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q9FHA7	9.6e-23	47.06	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	2.8e-22	59.34	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
O81313	1.4e-21	56.86	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]

BLAST of CmaCh14G012810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IXB7	6.5e-123	100.00	transcription factor bHLH87-like OS=Cucurbita maxima OX=3661 GN=LOC111480004 PE=...	[more]
A0A6J1GXV2	1.7e-102	87.55	transcription factor bHLH87-like OS=Cucurbita moschata OX=3662 GN=LOC111457836 P...	[more]
A0A0A0LDH7	7.5e-71	63.20	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G850530 PE=4 S...	[more]
A0A5D3BVP3	1.8e-69	62.31	Transcription factor bHLH87-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BIP2	1.8e-69	62.31	transcription factor bHLH87-like OS=Cucumis melo OX=3656 GN=LOC103489996 PE=4 SV...	[more]

BLAST of CmaCh14G012810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980720.1	1.3e-122	100.00	transcription factor bHLH87-like [Cucurbita maxima]	[more]
XP_023528594.1	2.0e-102	87.98	transcription factor bHLH87-like [Cucurbita pepo subsp. pepo]	[more]
XP_022956014.1	3.4e-102	87.55	transcription factor bHLH87-like [Cucurbita moschata]	[more]
KAG6581865.1	3.2e-92	85.14	Transcription factor basic helix-loop-helix 87, partial [Cucurbita argyrosperma ...	[more]
XP_038902463.1	2.5e-76	65.92	transcription factor bHLH87-like [Benincasa hispida]	[more]

BLAST of CmaCh14G012810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G21330.1	8.9e-32	54.04	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	6.8e-24	47.06	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	2.0e-23	59.34	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	9.8e-23	56.86	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	8.3e-22	54.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 151..200 e-value: 5.5E-13 score: 59.1
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 153..194 e-value: 1.2E-6 score: 28.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 145..194 score: 15.84034
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 144..210 e-value: 1.3E-11 score: 46.4
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 147..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..106
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..158
None	No IPR available	PANTHER	PTHR45914:SF12	TRANSCRIPTION FACTOR BHLH87	coord: 6..228
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 6..228
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 146..202 e-value: 3.79805E-33 score: 112.485

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G012810.1	CmaCh14G012810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity