CmaCh14G012710 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G012710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr14: 10059723 .. 10060217 (-)
RNA-Seq ExpressionCmaCh14G012710
SyntenyCmaCh14G012710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTTGGGTTTTCATTACTCTGTTTTTCTTTTCCTTTACAAAGTTCAATCTATCCTCTCTTTTCGGACCCATTTTGGCTTGTTTCTGTGACTCTGCTGGCTTGACGTGAAAGAAGAAGGAGACCCATCTAAGGGAAGAGGGTGAAAAAGCAAGCCCTCGCTAAGATTTGGATAACAACTTGTTTCTGGGTTTTGTTTTTTAACTGTTGTGAGCAGCTTTTTTGCTCTGTTTTGATTGAAGATTTGGTGGATTTGGGCGGTGAGTTCTAAGTTTTACTGTGTGTATTTTGATGAATCAATGCTCTATTTGGTTTCTCGCTTGATTTTGTTTTCCCTTGTATCAGATTTGATGAAACTTTATTTGAGCTGATTGAGTTTATTTTTCAGCTGGGTTCTGTGTGAAGGGATTAACAAGAGCTAGCTGGCTTCTGTCGTGTCACTGCCTTTGTTCCTGTTTTGGTTGGACATTAGAAGTGAAACATATTGTTGTCTGA

mRNA sequence

ATGTTTTGGGTTTTCATTACTCTGTTTTTCTTTTCCTTTACAAAGTTCAATCTATCCTCTCTTTTCGGACCCATTTTGGCTTGTTTCTCCCTCGCTAAGATTTGGATAACAACTTGTTTCTGGGTTTTGTTTTTTAACTGTTGTGAGCAGCTTTTTTGCTCTGTTTTGATTGAAGATTTGGTGGATTTGGGCGCTGGGTTCTGTGTGAAGGGATTAACAAGAGCTAGCTGGCTTCTGTCGTGTCACTGCCTTTGTTCCTGTTTTGGTTGGACATTAGAAGTGAAACATATTGTTGTCTGA

Coding sequence (CDS)

ATGTTTTGGGTTTTCATTACTCTGTTTTTCTTTTCCTTTACAAAGTTCAATCTATCCTCTCTTTTCGGACCCATTTTGGCTTGTTTCTCCCTCGCTAAGATTTGGATAACAACTTGTTTCTGGGTTTTGTTTTTTAACTGTTGTGAGCAGCTTTTTTGCTCTGTTTTGATTGAAGATTTGGTGGATTTGGGCGCTGGGTTCTGTGTGAAGGGATTAACAAGAGCTAGCTGGCTTCTGTCGTGTCACTGCCTTTGTTCCTGTTTTGGTTGGACATTAGAAGTGAAACATATTGTTGTCTGA

Protein sequence

MFWVFITLFFFSFTKFNLSSLFGPILACFSLAKIWITTCFWVLFFNCCEQLFCSVLIEDLVDLGAGFCVKGLTRASWLLSCHCLCSCFGWTLEVKHIVV
Homology
[Close]
BLAST of CmaCh14G012710 vs. NCBI nr
Match: KAG6581858.1 (hypothetical protein SDJN03_21860, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09
Identity = 32/39 (82.05%), Postives = 34/39 (87.18%), Query Frame = 0 

Query: 59 DLVDLGAGFCVKGLTRASWLLSCHCLCSCFG-WTLEVKH 97
          DLVDLGAGFCVKGLTRASWLLSCHCLCSCF  W   V++
Sbjct: 26 DLVDLGAGFCVKGLTRASWLLSCHCLCSCFAQWRFLVQN 64

The following BLAST results are available for this feature:
BLAST of CmaCh14G012710 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G012710 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G012710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6581858.14.2e-0982.05hypothetical protein SDJN03_21860, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh14G012710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G012710.1CmaCh14G012710.1mRNA