CmaCh14G012530 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ACAAAAAGAAACAAACGAAAAATTGAAGAAAAACAAAAAGAGGCCGAAGAACGACAGCCTCCTGCTGTCTTCTACTTGTTCATCTTCTTCAAAGATTTAAGCCGCAACGAAGGCGAACTCCTCTACACGAAGTGACCTTCTGAGAAGCCAAAACGGCGAATCAGAATGGGAAACCAGAAGCTAAAGTGGACGTCGGAGGAGGAAGACGCACTTTTGGCAGGCGTGAATAAGCACGGTCCCGGAAAGTGGAAGAACATTCTTAAAGATCCTGAGTTTGCTCCGTCTCTCACTCATCGCTCTAACATTGACCTCAAGGTCCCCATTCAATTACCTATTCCTTTCAATTCCTTATATGCGTGTTTTTTCTTTTTCGCATTTGGTTGACCTGTTTGTATTGATATTTAGGGTTTTAATTATAAACTCAGAGGCCGAACTGAAATATTGCGGGATTTTTGTTTGAAGTTACGGATTGGTTTCTTTAGAATCCAATAGGCTTGGTTTGCTTACAATTTGTATAGCTCTACGCAGTTGGTTGAGTGTTTTAACATGGAAGAAATTGGTTTTGTTCTTCAATGATTTTCTATGTTAGTTTTTGGACTAAATTGTACTTTATAGTTTTCCCTAAGATTTTCGTTTGACCAACTGATTAATGTAAGAAGAAGAGTCCAGAAAGTGGAATTAGAGGGAGGAAAGAGTTTGATTTTGTATATAAATATTAAATATCATTAATATGATGGCGCGTTTTTAGGCTTTCTTCAATGGAAGCCACGAACTTGGATAAACTGTATAAGATCTTCTTCGAGTCTGTTCCTAGATGCATCTTTGAGATTGTTTATGTTTCAGCATTACTAGAACACAACGATGACATGGTTTAATTTGCCTCAAATTCAAGGTTTTAATATGTAAATCCCTTGATTAAAAATCTTATATTTTTCCTGTTAACTTTAAAATATTGTGTTTGCGAAACAGCATGACTGTTTAGCTACCAATGTCTGCAACTATTTATCTCCATCGTGTTGCTTATGTACCTAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATCGTTGCTGCTATTTCTAACCACCAAAACTCTGCTCCTGCTAAGTTTAATGCATCTGCTGATACTGCAGGGGACGATACACCAAACAACAGCACACAAGATGGAAAAAATGTCCCAAGGTCTGTCACTCTAACCGTTTAGGTACTTTTACATTTGCATCATAGAGTCATCTGTTTAGTACTGTTATTATTACTTTCTTGGACTGTACAGGGGAGGGGGGAGAGTGTTTATAAATCCAACCTTTCATTATATAAGCTTCCCCCTCCCTCCACTCACCACCGCCTACCCCACCCCAAGTGACAAACGAAGGAGAGATGAAAGAGTAGTTTTTGAAGAGGTTGTTGGAAAATGGAATACCTGATGAAATATTTTTACATAGAAATGGAATAGCACCCTAAATCATATTATTCTTATAGGATTTATTCGTCAACAAAATATTATAGCAGTTCATCTTATTTGCTATATCATAAATCACGATTGGGTTTTTGGAATGTTGTTTTTCTTTAGCATGTACTATTATTGTGTGGCGTCTAGAGAATTCTCCCTGTTTAAAGAGTATAGGAAGACGTTTTGAATATGGTTTACATCATGATTATAGAATTGTTGAATTCTCTTTCCATTGTTTATAATGAACTACCAGCTGATATTCATCATAAATATGCTAATTCCCCCCCCCTCCCTCCCCTCCCCGTCTAACCCACCAGCATCACCAATGCAAATAATAAAATGAAATCCATGTTATGTGGAGATGTTCTAACTCTAAACAACGTGAGGAAAGGAAGTGATCAATACAAATATGCCATTTATGGTCCTAAGGATTATAGTGGAGTGTTACGACGTTTCTTACACATGAGAAAATTCACCTATTACCTCTGTAATTGAAAGAAACAAATTTCATTTGATCAACCTCAAGGGAAATTTTGATCACCAGAGAATATCACAGAAGGGGTGTTGTGATTTACCTTCTTTTCATTTTCATTTATTATTTCATTGAGGTCCTGTCATTGGTCTTATAACGATCTGTTGATCAGGTATTATACAATGATTTTTGAAGCCCTTTCAACCATAAAAGATTCAAATGGATGTGACATAGGTACAATTGTTAACTTTATTAAGGTAAGATGATGGTATCTTTTCTTTTCTTTCTTTTCTTTTCTTAACCTTATTCATTAGCACGAGCGCTCATATTACATGATACGTCAATAGTTGATTTCACATGGTGCAGCAAAGGCACGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTGAATGTTCTTTTCATTTTCTTATCGAATCAGTTCTGAAGGCAATTTGTTTGTATGCTGATATTTTATATGGTTTACTAAGTATTGAAGTTTGACTCTTAGACATGCTTCTCTTACAAGTTCATCTATATCCCCTTTCCCCCACCAAATGCAAACCCATGCATGCTTATGGGAAAAATTAAGATGTTTCATGGTACATTTTGAAGGGAGAAAAAAAAAAAAAACAGAAAAATTATACTTTTGATTATAAGTTTTCAAACTCGACATTTTAACTTCTAATATTTGAGTTCAGTAGCATTGGTCCTTGTCAGAATTCTTTTACCATAGTGAATGAAAGCTTATGTGACTTTTTTTTTAAAAATTAAATAGTATGCTTTTTTTCCCCTTCTTCTCTCCTCTTTCTCCCATCTTCCTTCTTCCTTCTTCCCATCCTTCTCCCTACCCAATCCATAGCCATTATCGCCCCCACCCATTGCCTCTTTCTTTTTTTTTTCTTTTTTTTTTTAAAATCCTCATCTTTTCTTATTTCTTCTTTCTTCTTTCTTTTCCCTTTCTCCTCCTTTCTTCCCTTCCCATTTTTAATGATTTAAAAAAATCTCATTTCAAATCTGGAATGGGAGAGTTTCGAGCACCTCCCTCATTTTATATCAAAAAGAGGATTTAGATTTTTTGTTTAAAAAATGAATGTGGGTTGTGGAGAAAGGAGGGGAAAGAGAAAGAAGGAAAAAAGGACAAAAAAGAAGGGGAAAAAAAAAGAAAAGAAAAAGAAAGTAAGAGGCGATGACAATGGCTATGGCTATTAATATTTTTATTAAAAAGTATTATTTCAAACTTGTGTACACCCTTTGACTAAGGTGTGCACAAGCTGGCTTGACACTTAAAAATATTTAAAAAAACAATATAGATACCTAGCCAATTTCAATTTTATATTTGTTTTTTCATCATAATATTTGTGAGTGTCAGCTTGCCTATACCTTGACTATTCTCACGAGACAATTGCTTGACTTTACAATCGTAACTCATAGGATATTATACCCAATTTAACAATACGTTAGCTGGTATTTATACTACTGAGAGATGAAGGAGTTTTATCCTGCCAAGGGATTGTCATTGTGAACAGTTTTGTTGGAGTTTAAAGATTTGTTTGAATCTTTTATGCATCTGGGTTCTTTTGTTTTCTTTCTGCCACACTACAGGTTCAGAATTGCTACCAGGTAAAGAAAGACAATTCATTGGCAGTTAATACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACCATGGGAGGGGGGATGCCATCAGGGGGGGATACGTTGGAAGACGCGGCGAAAGCGGCGGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCAGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCAATGCTACAGATTATAAAAGAGATATATGAAAAATGTAAGTGAACTGTTCATTCCTCATGAAAAGTTCTAAAGCTTTTGAGTTTCTAAAAAAAAAAAAACCCCTCTATTTTCTGTGTTATGTCACAGGTTCCCGTGGTGAAAGTATTCTCTTGGCTTAGGATCACTTGTAAGTGTAATGGCCAATCCTTTAATGTTCTTTGAATCCGCATGTAAATTCTTCAAATCCTGTGGAATTGTTCTTGTTATGGATGAATCAAATTAATTTATAGGTAGATATACAAATATTTGTCTAGTTGTTAAAATGAACTTGTCTTTCTTTTCCNTTAAGGGCATATCTGGTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACAAAAACAGGTTTAAAAATGGAACAAGAAATTGGAAACAACCATGATTTGCTGCATTTTGAGAAAATTAAGAAATTTGGTGACATTTTTGGCCAATTTCAAGAACTGTTCCTTCGATTTTGCATGATTTATCAGCTCTTTTTGCTGATGTGAAGCTGCTGGACCTTTAA ACAAAAAGAAACAAACGAAAAATTGAAGAAAAACAAAAAGAGGCCGAAGAACGACAGCCTCCTGCTGTCTTCTACTTGTTCATCTTCTTCAAAGATTTAAGCCGCAACGAAGGCGAACTCCTCTACACGAAGTGACCTTCTGAGAAGCCAAAACGGCGAATCAGAATGGGAAACCAGAAGCTAAAGTGGACGTCGGAGGAGGAAGACGCACTTTTGGCAGGCGTGAATAAGCACGGTCCCGGAAAGTGGAAGAACATTCTTAAAGATCCTGAGTTTGCTCCGTCTCTCACTCATCGCTCTAACATTGACCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATCGTTGCTGCTATTTCTAACCACCAAAACTCTGCTCCTGCTAAGTTTAATGCATCTGCTGATACTGCAGGGGACGATACACCAAACAACAGCACACAAGATGGAAAAAATGTCCCAAGGTATTATACAATGATTTTTGAAGCCCTTTCAACCATAAAAGATTCAAATGGATGTGACATAGGTACAATTGTTAACTTTATTAAGCAAAGGCACGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTTCAGAATTGCTACCAGGTAAAGAAAGACAATTCATTGGCAGTTAATACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACCATGGGAGGGGGGATGCCATCAGGGGGGGATACGTTGGAAGACGCGGCGAAAGCGGCGGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCAGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCAATGCTACAGATTATAAAAGAGATATATGAAAAATCTCTTTTTGCTGATGTGAAGCTGCTGGACCTTTAA ATGGGAAACCAGAAGCTAAAGTGGACGTCGGAGGAGGAAGACGCACTTTTGGCAGGCGTGAATAAGCACGGTCCCGGAAAGTGGAAGAACATTCTTAAAGATCCTGAGTTTGCTCCGTCTCTCACTCATCGCTCTAACATTGACCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGGCTCCTAAAGCAAAAGCTATCGTTGCTGCTATTTCTAACCACCAAAACTCTGCTCCTGCTAAGTTTAATGCATCTGCTGATACTGCAGGGGACGATACACCAAACAACAGCACACAAGATGGAAAAAATGTCCCAAGGTATTATACAATGATTTTTGAAGCCCTTTCAACCATAAAAGATTCAAATGGATGTGACATAGGTACAATTGTTAACTTTATTAAGCAAAGGCACGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGGAGGCTTGTTTCACAAGGAAAGCTCGAAAAGGTTCAGAATTGCTACCAGGTAAAGAAAGACAATTCATTGGCAGTTAATACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCACAATATACCATGGGAGGGGGGATGCCATCAGGGGGGGATACGTTGGAAGACGCGGCGAAAGCGGCGGCCTACAAAGTTGCTGATGCAGAGAACAAATCTTTCTTAGCTGCAGAAGCTGTCAAGGAGGCAGAGAGAATTGCAAAGATGGCAGAAGATACAGATTCAATGCTACAGATTATAAAAGAGATATATGAAAAATCTCTTTTTGCTGATGTGAAGCTGCTGGACCTTTAA MGNQKLKWTSEEEDALLAGVNKHGPGKWKNILKDPEFAPSLTHRSNIDLKDKWRNLSVSTASQGSKEKSRAPKAKAIVAAISNHQNSAPAKFNASADTAGDDTPNNSTQDGKNVPRYYTMIFEALSTIKDSNGCDIGTIVNFIKQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYQVKKDNSLAVNTPTPKQKDVRQRISQYTMGGGMPSGGDTLEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEIYEKSLFADVKLLDL Homology
BLAST of CmaCh14G012530 vs. ExPASy Swiss-Prot
Match: F4I7L1 (Telomere repeat-binding factor 4 OS=Arabidopsis thaliana OX=3702 GN=At1g17520 PE=2 SV=2) HSP 1 Score: 242.3 bits (617), Expect = 6.6e-63 Identity = 150/291 (51.55%), Postives = 188/291 (64.60%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy Swiss-Prot
Match: F4IEY4 (Telomere repeat-binding factor 5 OS=Arabidopsis thaliana OX=3702 GN=At1g72740 PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 3.3e-54 Identity = 133/289 (46.02%), Postives = 171/289 (59.17%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy Swiss-Prot
Match: Q8W119 (Single myb histone 4 OS=Zea mays OX=4577 GN=SMH4 PE=2 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 9.0e-52 Identity = 135/287 (47.04%), Postives = 170/287 (59.23%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy Swiss-Prot
Match: Q6WLH4 (Single myb histone 3 OS=Zea mays OX=4577 GN=SMH3 PE=2 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 7.6e-51 Identity = 133/285 (46.67%), Postives = 167/285 (58.60%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy Swiss-Prot
Match: Q8VWK4 (Telomere repeat-binding factor 1 OS=Arabidopsis thaliana OX=3702 GN=TRB1 PE=1 SV=1) HSP 1 Score: 144.1 bits (362), Expect = 2.5e-33 Identity = 109/281 (38.79%), Postives = 148/281 (52.67%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy TrEMBL
Match: A0A6J1J017 (MYB transcription factor OS=Cucurbita maxima OX=3661 GN=LOC111479985 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy TrEMBL
Match: A0A6J1GWF6 (MYB transcription factor OS=Cucurbita moschata OX=3662 GN=LOC111458043 PE=4 SV=1) HSP 1 Score: 519.2 bits (1336), Expect = 1.0e-143 Identity = 267/268 (99.63%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy TrEMBL
Match: A0A0A0LDD1 (MYB transcription factor OS=Cucumis sativus OX=3659 GN=Csa_3G848130 PE=4 SV=1) HSP 1 Score: 473.0 bits (1216), Expect = 8.5e-130 Identity = 249/278 (89.57%), Postives = 260/278 (93.53%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy TrEMBL
Match: A0A5A7SZW3 (MYB transcription factor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00470 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129 Identity = 248/278 (89.21%), Postives = 260/278 (93.53%), Query Frame = 0
BLAST of CmaCh14G012530 vs. ExPASy TrEMBL
Match: E5GB88 (MYB transcription factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129 Identity = 248/278 (89.21%), Postives = 260/278 (93.53%), Query Frame = 0
BLAST of CmaCh14G012530 vs. NCBI nr
Match: XP_022980688.1 (telomere repeat-binding factor 4-like [Cucurbita maxima]) HSP 1 Score: 520.8 bits (1340), Expect = 7.4e-144 Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. NCBI nr
Match: XP_023529141.1 (telomere repeat-binding factor 4-like [Cucurbita pepo subsp. pepo] >KAG7018274.1 Telomere repeat-binding factor 4 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143 Identity = 267/268 (99.63%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. NCBI nr
Match: XP_022956308.1 (telomere repeat-binding factor 4-like [Cucurbita moschata]) HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143 Identity = 267/268 (99.63%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. NCBI nr
Match: KAG6581841.1 (Telomere repeat-binding factor 4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 519.2 bits (1336), Expect = 2.1e-143 Identity = 267/268 (99.63%), Postives = 268/268 (100.00%), Query Frame = 0
BLAST of CmaCh14G012530 vs. NCBI nr
Match: XP_038888755.1 (telomere repeat-binding factor 4-like [Benincasa hispida]) HSP 1 Score: 486.1 bits (1250), Expect = 2.0e-133 Identity = 256/278 (92.09%), Postives = 267/278 (96.04%), Query Frame = 0
BLAST of CmaCh14G012530 vs. TAIR 10
Match: AT1G17520.1 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 241.9 bits (616), Expect = 6.2e-64 Identity = 150/291 (51.55%), Postives = 188/291 (64.60%), Query Frame = 0
BLAST of CmaCh14G012530 vs. TAIR 10
Match: AT1G72740.2 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 219.5 bits (558), Expect = 3.3e-57 Identity = 132/283 (46.64%), Postives = 171/283 (60.42%), Query Frame = 0
BLAST of CmaCh14G012530 vs. TAIR 10
Match: AT1G72740.1 (Homeodomain-like/winged-helix DNA-binding family protein ) HSP 1 Score: 213.4 bits (542), Expect = 2.3e-55 Identity = 133/289 (46.02%), Postives = 171/289 (59.17%), Query Frame = 0
BLAST of CmaCh14G012530 vs. TAIR 10
Match: AT1G49950.3 (telomere repeat binding factor 1 ) HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34 Identity = 109/281 (38.79%), Postives = 148/281 (52.67%), Query Frame = 0
BLAST of CmaCh14G012530 vs. TAIR 10
Match: AT1G49950.2 (telomere repeat binding factor 1 ) HSP 1 Score: 144.1 bits (362), Expect = 1.7e-34 Identity = 109/281 (38.79%), Postives = 148/281 (52.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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