Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATAACAGCTTCCTGTTCTTCTATTTACCTCTTTTGAAGCTACGATTTTTGGATGTGTTTTGTTCATTGAAGAAATCTGTTTCTTCTGATTGTGAGATGAACGATCCTGTTTTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGGTGATTCAGTAATGTTCTTTTGTTCAATTCTTCATCTCTTAGATTCATCTGATATCTTTATGTAAATGTGGTTGTGAATTTTCCAGTTCTTGGAAGAAGCAAAACATCGTGCCACAGAACAAGAAACAGGAGTCAAATGGTTGCCACCACAGAAAAAAAGCAAGAAATCTTGGAAAAACACACCCTTCTCCTGGTTAAAAAGTGATAAAAGGACCAAGCCTCTGCCCAAACCAGGTACAAACCCTCACATACCCAATACAAGGCGTGTTCATGTTTCTGGTCCAATTTACACCAGAACTACAGCCATAGACGGCAGATCTCGAGGCGGCCGTTCGACGTCTGGACCGATTGCTAGTCTCTTCAGTCCCAGTTTGAGTTCAGAGATGGAGATCCCTTATATGTGTCTTCACCAACTTACTTGCCCCAATACAAACCACAATTATGGTCCAATATATCTTGTTACATAGACATACATTTCTCAGTTCATCTTGTCTGGAGCCAGGGGCAGCCCATCTTTGAAATCTTTTGTATGCGTAATGGTTTTGATAAGCTGTTTAATGTTATGGTTATTGCCACAAACAAGTCAAGCCCATTCCATTGCTTACTAAACAGATCAAAATGGATTCAAAGGATTGAAAATGTCTGTAAATAACCATGTTCTAACAAAATGAAAGCGGG
mRNA sequence
ATGCATAACAGCTTCCTGTTCTTCTATTTACCTCTTTTGAAGCTACGATTTTTGGATGTGTTTTGTTCATTGAAGAAATCTGTTTCTTCTGATTGTGAGATGAACGATCCTGTTTTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCGTGCCACAGAACAAGAAACAGGAGTCAAATGGTTGCCACCACAGAAAAAAAGCAAGAAATCTTGGAAAAACACACCCTTCTCCTGGTTAAAAAGTGATAAAAGGACCAAGCCTCTGCCCAAACCAGGTACAAACCCTCACATACCCAATACAAGGCGTGTTCATGTTTCTGGTCCAATTTACACCAGAACTACAGCCATAGACGGCAGATCTCGAGGCGGCCGTTCGACGTCTGGACCGATTGCTAGTCTCTTCAGTCCCAGTTTGAGTTCAGAGATGGAGATCCCTTATATGTGTCTTCACCAACTTACTTGCCCCAATACAAACCACAATTATGGTCCAATATATCTTGTTACATAGACATACATTTCTCAGTTCATCTTGTCTGGAGCCAGGGGCAGCCCATCTTTGAAATCTTTTGTATGCGTAATGGTTTTGATAAGCTGTTTAATGTTATGGTTATTGCCACAAACAAGTCAAGCCCATTCCATTGCTTACTAAACAGATCAAAATGGATTCAAAGGATTGAAAATGTCTGTAAATAACCATGTTCTAACAAAATGAAAGCGGG
Coding sequence (CDS)
ATGCATAACAGCTTCCTGTTCTTCTATTTACCTCTTTTGAAGCTACGATTTTTGGATGTGTTTTGTTCATTGAAGAAATCTGTTTCTTCTGATTGTGAGATGAACGATCCTGTTTTTGATGATTTTGATCCTCGCCTCAACTTTTCCAAGTTCTTGGAAGAAGCAAAACATCGTGCCACAGAACAAGAAACAGGAGTCAAATGGTTGCCACCACAGAAAAAAAGCAAGAAATCTTGGAAAAACACACCCTTCTCCTGGTTAAAAAGTGATAAAAGGACCAAGCCTCTGCCCAAACCAGGTACAAACCCTCACATACCCAATACAAGGCGTGTTCATGTTTCTGGTCCAATTTACACCAGAACTACAGCCATAGACGGCAGATCTCGAGGCGGCCGTTCGACGTCTGGACCGATTGCTAGTCTCTTCAGTCCCAGTTTGAGTTCAGAGATGGAGATCCCTTATATGTGTCTTCACCAACTTACTTGCCCCAATACAAACCACAATTATGGTCCAATATATCTTGTTACATAG
Protein sequence
MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRATEQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTRTTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT
Homology
BLAST of CmaCh14G012230 vs. ExPASy TrEMBL
Match:
A0A6J1IXC2 (uncharacterized protein LOC111480012 OS=Cucurbita maxima OX=3661 GN=LOC111480012 PE=4 SV=1)
HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT
Sbjct: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
Query: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR
Sbjct: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
Query: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT
Sbjct: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 176
BLAST of CmaCh14G012230 vs. ExPASy TrEMBL
Match:
A0A6J1DIA9 (uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020302 PE=4 SV=1)
HSP 1 Score: 212.2 bits (539), Expect = 1.7e-51
Identity = 111/164 (67.68%), Postives = 125/164 (76.22%), Query Frame = 0
Query: 24 LKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRA----------TEQETGVKWLPPQK 83
+ KSVS D EM+DP FD+FDPRL+FSKFLEEAKH A TE+E G KWL +K
Sbjct: 1 MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEK 60
Query: 84 KSKKSWKNTPFSWLKSDKRTKPLPKPGTN-PHIPNTRRVHVSGPIYTRTTAIDGRSRGGR 143
KSKKSWK T FSWLKSDK++KPLPKP N PH + R VHVSGPIYT DGR R R
Sbjct: 61 KSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPR-RR 120
Query: 144 STSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TSGPIASLF+PS+ +EMEIPYMCLHQLT PN++HNYGPIYLVT
Sbjct: 121 PTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163
BLAST of CmaCh14G012230 vs. ExPASy TrEMBL
Match:
A0A0A0LC20 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1)
HSP 1 Score: 209.9 bits (533), Expect = 8.5e-51
Identity = 108/162 (66.67%), Postives = 123/162 (75.93%), Query Frame = 0
Query: 24 LKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT---------EQETGVKWLPPQKK 83
+KKS+S D EM +P FDDFD LNFSKFLEEAKH AT E+ET KWL +KK
Sbjct: 1 MKKSISLDYEMENPGFDDFDIGLNFSKFLEEAKHHATQQHFKAASIEEETERKWLAQEKK 60
Query: 84 SKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTRTTAIDGRSRGGRST 143
+KKSWKNT FSWLKSDK++K LPKP NPH PN RRV+VSGPIY+ IDGR R R
Sbjct: 61 NKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPIYSEAMTIDGRPR-RRPM 120
Query: 144 SGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
SGPIASLF+P++ +E EIPYMCLHQL+ PNTN NYGPIYLVT
Sbjct: 121 SGPIASLFNPTMRTETEIPYMCLHQLSAPNTNQNYGPIYLVT 161
BLAST of CmaCh14G012230 vs. ExPASy TrEMBL
Match:
A0A1S3CCA9 (uncharacterized protein LOC103499209 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499209 PE=4 SV=1)
HSP 1 Score: 201.8 bits (512), Expect = 2.3e-48
Identity = 106/166 (63.86%), Postives = 123/166 (74.10%), Query Frame = 0
Query: 20 VFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT---------EQETGVKWLP 79
+FCS+KKS S D EM + FDDFD LNFS FLEEAKH AT E+E G K L
Sbjct: 1 MFCSMKKSDSLDYEMENTGFDDFDIGLNFSMFLEEAKHHATRQHLKAASIEEERGRKRLA 60
Query: 80 PQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTRTTAIDGRSRG 139
+KK+KKSWKNT FSWLKSDK++K LPKP NPH PN RRV+VSGP+Y+ T +GR R
Sbjct: 61 QEKKNKKSWKNTLFSWLKSDKKSKSLPKPEKNPHTPNKRRVYVSGPMYSEATTTNGRPR- 120
Query: 140 GRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
R SGPIASLF+PS+ +E EIPYMCL QL+ PN+NHNYGPIYLVT
Sbjct: 121 RRPMSGPIASLFNPSMRTETEIPYMCLQQLSAPNSNHNYGPIYLVT 165
BLAST of CmaCh14G012230 vs. ExPASy TrEMBL
Match:
A0A6J1GB15 (uncharacterized protein LOC111452535 OS=Cucurbita moschata OX=3662 GN=LOC111452535 PE=4 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 5.7e-47
Identity = 104/151 (68.87%), Postives = 112/151 (74.17%), Query Frame = 0
Query: 34 MNDPVFDDFDPRLNFSKFLEEAKHRA--------TEQETGVKWLPPQKKSKKSWKNTPFS 93
M+DP FDDFDPR NFSKFLEEAKH A T++ETG KWL KKSKKSWKNT FS
Sbjct: 1 MDDPCFDDFDPRTNFSKFLEEAKHHAKEEDFKASTQEETGRKWLAQHKKSKKSWKNTLFS 60
Query: 94 WLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTRTTAIDGRSRGGRSTSGPIASLFSPS 153
WL SDK +K LPK N H N RRVHVSG IYT T +DGR R R TSGPIASLF+PS
Sbjct: 61 WLNSDKTSKSLPKLERNSHTSNKRRVHVSGLIYTGATTVDGRPR-HRPTSGPIASLFNPS 120
Query: 154 LSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
+ +EMEIPYMCLHQLT P NH YGPIYLVT
Sbjct: 121 MRTEMEIPYMCLHQLTSPIPNHYYGPIYLVT 150
BLAST of CmaCh14G012230 vs. NCBI nr
Match:
XP_022980730.1 (uncharacterized protein LOC111480012 [Cucurbita maxima])
HSP 1 Score: 364.8 bits (935), Expect = 4.3e-97
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0
Query: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT
Sbjct: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
Query: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR
Sbjct: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
Query: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT
Sbjct: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 176
BLAST of CmaCh14G012230 vs. NCBI nr
Match:
XP_023527883.1 (uncharacterized protein LOC111790969 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 347.4 bits (890), Expect = 7.1e-92
Identity = 168/176 (95.45%), Postives = 170/176 (96.59%), Query Frame = 0
Query: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
MHNSFLFFYLPLLKLRFLDVFCS+K SVSSDCEMNDPVFDDFDPRLNFSKFLEEAKH AT
Sbjct: 1 MHNSFLFFYLPLLKLRFLDVFCSMKNSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHHAT 60
Query: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
EQETG KWLPPQKKSKKSWKNT FSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPI+TR
Sbjct: 61 EQETGAKWLPPQKKSKKSWKNTLFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIFTR 120
Query: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLT PNTNHNYGPIYLVT
Sbjct: 121 ATAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTSPNTNHNYGPIYLVT 176
BLAST of CmaCh14G012230 vs. NCBI nr
Match:
KAG7018247.1 (hypothetical protein SDJN02_20115 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 342.4 bits (877), Expect = 2.3e-90
Identity = 165/176 (93.75%), Postives = 170/176 (96.59%), Query Frame = 0
Query: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
MHNSFLFFYLPLLKLRFLDVFCS+K SVSSDCEM+DPVFDDFDPRLNFSKFLEEAKH AT
Sbjct: 1 MHNSFLFFYLPLLKLRFLDVFCSMKNSVSSDCEMDDPVFDDFDPRLNFSKFLEEAKHHAT 60
Query: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
EQETG KWLPPQKKSKKSWKNT FSWLKSDKRT+PLPKPGTNPHIP+TRRVHVSGPIYTR
Sbjct: 61 EQETGAKWLPPQKKSKKSWKNTLFSWLKSDKRTEPLPKPGTNPHIPSTRRVHVSGPIYTR 120
Query: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TAIDGRSRGGRSTSGPIASLFSPSLS+EMEIPYMCLHQLT PNTNHNYGPIYLVT
Sbjct: 121 ATAIDGRSRGGRSTSGPIASLFSPSLSTEMEIPYMCLHQLTSPNTNHNYGPIYLVT 176
BLAST of CmaCh14G012230 vs. NCBI nr
Match:
KAG6581796.1 (hypothetical protein SDJN03_21798, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 341.3 bits (874), Expect = 5.1e-90
Identity = 165/176 (93.75%), Postives = 169/176 (96.02%), Query Frame = 0
Query: 1 MHNSFLFFYLPLLKLRFLDVFCSLKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRAT 60
MHNSFLFFYLPLLKLRFLDVFCS+K SVSSDCEM+DPVFDDFDPRLNFSKFLEEAKH AT
Sbjct: 1 MHNSFLFFYLPLLKLRFLDVFCSMKNSVSSDCEMDDPVFDDFDPRLNFSKFLEEAKHHAT 60
Query: 61 EQETGVKWLPPQKKSKKSWKNTPFSWLKSDKRTKPLPKPGTNPHIPNTRRVHVSGPIYTR 120
EQETG KWLPPQKKSKKSWKNT FSWLKSDKRTKP PKPGTNPHIP+TRRVHVSGPIYTR
Sbjct: 61 EQETGAKWLPPQKKSKKSWKNTLFSWLKSDKRTKPPPKPGTNPHIPSTRRVHVSGPIYTR 120
Query: 121 TTAIDGRSRGGRSTSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TAIDGRSRGGRSTSGPIASLFSPSLS+EMEIPYMCLHQLT PNTNHNYGPIYLVT
Sbjct: 121 ATAIDGRSRGGRSTSGPIASLFSPSLSTEMEIPYMCLHQLTSPNTNHNYGPIYLVT 176
BLAST of CmaCh14G012230 vs. NCBI nr
Match:
XP_022152626.1 (uncharacterized protein LOC111020302 [Momordica charantia])
HSP 1 Score: 212.2 bits (539), Expect = 3.5e-51
Identity = 111/164 (67.68%), Postives = 125/164 (76.22%), Query Frame = 0
Query: 24 LKKSVSSDCEMNDPVFDDFDPRLNFSKFLEEAKHRA----------TEQETGVKWLPPQK 83
+ KSVS D EM+DP FD+FDPRL+FSKFLEEAKH A TE+E G KWL +K
Sbjct: 1 MNKSVSPDLEMDDPGFDEFDPRLSFSKFLEEAKHHATVQDFKASKSTEEEAGRKWLGQEK 60
Query: 84 KSKKSWKNTPFSWLKSDKRTKPLPKPGTN-PHIPNTRRVHVSGPIYTRTTAIDGRSRGGR 143
KSKKSWK T FSWLKSDK++KPLPKP N PH + R VHVSGPIYT DGR R R
Sbjct: 61 KSKKSWKTTIFSWLKSDKKSKPLPKPEINHPHTSSKRLVHVSGPIYTGAMTTDGRPR-RR 120
Query: 144 STSGPIASLFSPSLSSEMEIPYMCLHQLTCPNTNHNYGPIYLVT 177
TSGPIASLF+PS+ +EMEIPYMCLHQLT PN++HNYGPIYLVT
Sbjct: 121 PTSGPIASLFNPSMRTEMEIPYMCLHQLTSPNSSHNYGPIYLVT 163
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IXC2 | 2.1e-97 | 100.00 | uncharacterized protein LOC111480012 OS=Cucurbita maxima OX=3661 GN=LOC111480012... | [more] |
A0A6J1DIA9 | 1.7e-51 | 67.68 | uncharacterized protein LOC111020302 OS=Momordica charantia OX=3673 GN=LOC111020... | [more] |
A0A0A0LC20 | 8.5e-51 | 66.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646660 PE=4 SV=1 | [more] |
A0A1S3CCA9 | 2.3e-48 | 63.86 | uncharacterized protein LOC103499209 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A6J1GB15 | 5.7e-47 | 68.87 | uncharacterized protein LOC111452535 OS=Cucurbita moschata OX=3662 GN=LOC1114525... | [more] |
Match Name | E-value | Identity | Description | |
XP_022980730.1 | 4.3e-97 | 100.00 | uncharacterized protein LOC111480012 [Cucurbita maxima] | [more] |
XP_023527883.1 | 7.1e-92 | 95.45 | uncharacterized protein LOC111790969 [Cucurbita pepo subsp. pepo] | [more] |
KAG7018247.1 | 2.3e-90 | 93.75 | hypothetical protein SDJN02_20115 [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAG6581796.1 | 5.1e-90 | 93.75 | hypothetical protein SDJN03_21798, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022152626.1 | 3.5e-51 | 67.68 | uncharacterized protein LOC111020302 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |