CmaCh14G011890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G011890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Serine/arginine repetitive matrix protein 2, putative isoform 2
Location	Cma_Chr14: 9516874 .. 9519205 (-)
RNA-Seq Expression	CmaCh14G011890
Synteny	CmaCh14G011890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCTTTTCTCCATCTGTTTCTCCTTCCTTCCTTCCGTTTCTCTGCAAAAATCCTTATGTCTCTCTCTCTATCCAAATCCCGATCCTTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCCTCGTCCTCGTCCATTTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTACCGACAACGATCTCACCGACCTTTCTGAATCTCCTTCCTCCGATCCTCTTCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCTTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCCAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTATTGCTCTTCTTTCGTTGCATTTTCATTTTGAATTTATTCTTTTTTATATGTATATATAATCTTCTTCATGGTAGGTTCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATGTGAGGCTTCCCAACACTCTGACCACGAGGTAACCTGAGAGCTTTCTGCTTTCCCTAATAAATCGGCAGCTGATCTGGGTTCGTGCTTATTATTTCTTATATTAAATTCGTTTCTGCCGTTATGATGAAGTCTCAATTATATATTATCTTACCTCATAACTTATTTATATACATAGATTCAGGGTTTTTAAATCAAAGAATTAACATGAAAGTTCCTTTGATGTGGGTTAATATGTATAAACTTAACACCCTTCGGATTGTCAAGTATTCTACTTTCGTTTGATAACGTATTCTACTCCCTTTTCTCTCACTCCATATTGTAATGAGAAACATAGTTGTCATCTCAAACAGTGATAACACATTGTATACCCATATGATGGATTCCAAATTAATGAAGTAGGAGGGAGGGCCGGAAAGTATGCTAGAGATTAATATATGTGGGAGTGATTTCCAAAATTGTAGTTTGCATCGCTTTATGGTGAGGAAGATAAGTTTTCAACTTCTAACGCGTTAGTGTGCAGCTTGTGTGGTGGTGTTTAAAACCTTGTGTAATTATTGGAAGATCATTCTTTTGTTTCTTTGTTGGGGTACCCTCTACTTGATCCCTAGCCTGTTTCCTTTCCTCTTTTGATTATATATAATCGTTTCTTAAAAAATTGTGGTTTACATATTTTGATCGAAGAAGCTATTCATATTGCGAGTGCAACGGTGTGAGCTTTTGAAGAATTTTTTTTTTTTTTTTAAGTTGGTCCGGGCGTCTATTTTAAGTCGTTCTTTATGTTTCAAAATTAGGGAAACGATAATTGGAAATTCCATGGCAACACATAATTGGTGGTTCTTAAATTGCCGACTGAAGAATGTTCTCAATTTTTCTCTGTTGGAAATTATTTCTTACATTGTATTGTAATTTACGGAATTAGTTTTTGCATTCTTCATTGTGGTTGGAAATTTCTAGTGTTCTGGAAGGATTTCATAATCTGAGGTATGCATCCTTTGGTGCTAAGCTTGCACCATTCATGATTATGTCGTGAATGTAAATTGCTTTCTAATCTTTGACTCAGCCCATGATTTTGATTGGGAGAGAGTTTGGAAGGAATTTAAACTTTCAAGGTTCATTTATTGATCATTAATTGAGAAGTGAGTAACGTACTCTGCACAACTATTTGCAGCTCGACCTGCCTTGTAAAACTCATGTATAGAAGAAGACAACCAATAACCGATTAGCAAGATGGCAGAGCGAGGGGGAGGGGCTTGTATAGATGTCAGCTGGCCCAGCTGAGCGTTCTTCATCAAATGGCTCTTTGTCCGTCATTGCCAAAGTACACGTAATATCTACTAGCAGCAGTATATCTTGAATTTGATCACATATGTATACTGTTTTCCGACCTTTGCTTTTAAATGTTTTTCCTTTTGGATAATTTGGTTCTTCCAAGTATGCACAGGTGTGTTGCATATTTTGTTTCTTATATGTTGTAATTTAAATCTAAGTATTGGAAAAAACATGATTCTTTCCAACTCCAATTTCAGATTAGAACATGAAACATAGTGGGTGGGGTAGCTTTAAAACTTGAGATTTGGAAATTAGCAGTTGCTTAAGGCTATTTTAGATTAGGTTAGGTTTATTAAACCTATGAAACCTGCTATCCTAATTTGCTTTGGATAGACCACACAAACTTGTCAACGCAAGTTAAAGCTCTCCAAGTCTTTTAGCCAAAGCAAACATCATTATTCTAATCAGAACAAGC

mRNA sequence

AGCCTTTTCTCCATCTGTTTCTCCTTCCTTCCTTCCGTTTCTCTGCAAAAATCCTTATGTCTCTCTCTCTATCCAAATCCCGATCCTTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCCTCGTCCTCGTCCATTTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTACCGACAACGATCTCACCGACCTTTCTGAATCTCCTTCCTCCGATCCTCTTCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCTTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCCAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTTCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATGTGAGGCTTCCCAACACTCTGACCACGAGGTAACCTGAGAGCTTTCTGCTTTCCCTAATAAATCGGCAGCTGATCTGGCTCGACCTGCCTTGTAAAACTCATGTATAGAAGAAGACAACCAATAACCGATTAGCAAGATGGCAGAGCGAGGGGGAGGGGCTTGTATAGATGTCAGCTGGCCCAGCTGAGCGTTCTTCATCAAATGGCTCTTTGTCCGTCATTGCCAAAGTACACGTAATATCTACTAGCAGCAGTATATCTTGAATTTGATCACATATGTATACTGTTTTCCGACCTTTGCTTTTAAATGTTTTTCCTTTTGGATAATTTGGTTCTTCCAAGTATGCACAGGTGTGTTGCATATTTTGTTTCTTATATGTTGTAATTTAAATCTAAGTATTGGAAAAAACATGATTCTTTCCAACTCCAATTTCAGATTAGAACATGAAACATAGTGGGTGGGGTAGCTTTAAAACTTGAGATTTGGAAATTAGCAGTTGCTTAAGGCTATTTTAGATTAGGTTAGGTTTATTAAACCTATGAAACCTGCTATCCTAATTTGCTTTGGATAGACCACACAAACTTGTCAACGCAAGTTAAAGCTCTCCAAGTCTTTTAGCCAAAGCAAACATCATTATTCTAATCAGAACAAGC

Coding sequence (CDS)

ATGTCTCTCTCTCTATCCAAATCCCGATCCTTAACCCTAACCCTAACCCTAAATCTCCTTCGTCCTCGTCCTCGTCCTCGTCCATTTCCCCTTCAATCTCTCGACCGCCGTACGTTCTCCTCCTCTACCGACAACGATCTCACCGACCTTTCTGAATCTCCTTCCTCCGATCCTCTTCTCCGGAACCTTGAGGACGCTATTCAACGGATCCTTGTTCGCCGGTCGGCTCCCGACTGGCTCCCTTTCGTTCCCGGTGCTTCATATTGGGTTCCCTTGCCTTCTACTTCCCATTTGCCTCCCATCGCCAACCTTCTTCACAACTTCGCTAACCCTCTCTCTCCAGAGCAATCCTTGTCTACCACTACCGTCCGTGGCTGGCCTTCTTCTCATTTCTTCATTCAAGGTTCCCATCTGCCTTCTCTTGAGCCGGAGGTTGAGACCAATTCGGCTGAATGTGAGGCTTCCCAACACTCTGACCACGAGGTAACCTGA

Protein sequence

MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLSTTTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT

Homology

[Close]

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL
Match: A0A6J1J031 (uncharacterized protein LOC111480015 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480015 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 8.3e-85
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 164
           TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT
Sbjct: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 163

[Close]

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL
Match: A0A6J1J062 (uncharacterized protein LOC111480015 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480015 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.1e-84
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEV 163
           TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE+
Sbjct: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEL 162

[Close]

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL
Match: A0A6J1GVG9 (uncharacterized protein LOC111457911 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457911 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.1e-76
Identity = 153/163 (93.87%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPR      PLQSL RRTFSSS DNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRLS----PLQSLGRRTFSSSPDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 164
           TTVRGWPSSHFFIQG+HLPSLEPEVETNSAECEASQHSDHE T
Sbjct: 121 TTVRGWPSSHFFIQGAHLPSLEPEVETNSAECEASQHSDHEET 159

[Close]

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL
Match: A0A6J1GVQ5 (uncharacterized protein LOC111457911 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457911 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.2e-75
Identity = 152/162 (93.83%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPR      PLQSL RRTFSSS DNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRLS----PLQSLGRRTFSSSPDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEV 163
           TTVRGWPSSHFFIQG+HLPSLEPEVETNSAECEASQHSDHE+
Sbjct: 121 TTVRGWPSSHFFIQGAHLPSLEPEVETNSAECEASQHSDHEL 158

[Close]

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL
Match: A0A0A0K9L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 3.1e-55
Identity = 126/163 (77.30%), Postives = 135/163 (82.82%), Query Frame = 0


Query: 1   MSLS-LSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESP-SSDP 60
           MSLS LSK +S  LTLTLNLLRP           L RR FSS +D+DLTDL ESP SSDP
Sbjct: 1   MSLSALSKPKS--LTLTLNLLRPH----------LFRRPFSSPSDHDLTDLPESPSSSDP 60

Query: 61  LLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSL 120
           LLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPS SHLPPIAN+L N ANPLSPEQSL
Sbjct: 61  LLRNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSNSHLPPIANVLRNLANPLSPEQSL 120

Query: 121 STTTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE 162
           STTTVRGWPSSH+FIQG+HLPSL+PEV+T S EC+AS   DHE
Sbjct: 121 STTTVRGWPSSHYFIQGTHLPSLDPEVDTTSTECDAS--LDHE 149

[Close]

BLAST of CmaCh14G011890 vs. NCBI nr
Match: XP_022980734.1 (uncharacterized protein LOC111480015 isoform X2 [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 1.7e-84
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 164
           TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT
Sbjct: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 163

[Close]

BLAST of CmaCh14G011890 vs. NCBI nr
Match: XP_022980733.1 (uncharacterized protein LOC111480015 isoform X1 [Cucurbita maxima])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEV 163
           TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE+
Sbjct: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEL 162

[Close]

BLAST of CmaCh14G011890 vs. NCBI nr
Match: KAG7018211.1 (hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 295.8 bits (756), Expect = 2.3e-76
Identity = 154/163 (94.48%), Postives = 155/163 (95.09%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPR      PLQSLDRRTFSSS DNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRLS----PLQSLDRRTFSSSPDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 164
           TTVRGWPSSHFFIQG+HLPSLEPEVETNSAECEASQHSDHE T
Sbjct: 121 TTVRGWPSSHFFIQGAHLPSLEPEVETNSAECEASQHSDHEET 159

[Close]

BLAST of CmaCh14G011890 vs. NCBI nr
Match: XP_022956127.1 (uncharacterized protein LOC111457911 isoform X2 [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 153/163 (93.87%), Postives = 154/163 (94.48%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPR      PLQSL RRTFSSS DNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRLS----PLQSLGRRTFSSSPDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEVT 164
           TTVRGWPSSHFFIQG+HLPSLEPEVETNSAECEASQHSDHE T
Sbjct: 121 TTVRGWPSSHFFIQGAHLPSLEPEVETNSAECEASQHSDHEET 159

[Close]

BLAST of CmaCh14G011890 vs. NCBI nr
Match: XP_022956126.1 (uncharacterized protein LOC111457911 isoform X1 [Cucurbita moschata])

HSP 1 Score: 292.4 bits (747), Expect = 2.5e-75
Identity = 152/162 (93.83%), Postives = 154/162 (95.06%), Query Frame = 0


Query: 1   MSLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLL 60
           MSLSLSKSRSLTLTLTLNLLRPR      PLQSL RRTFSSS DNDLTDLSESPSSDPLL
Sbjct: 1   MSLSLSKSRSLTLTLTLNLLRPRLS----PLQSLGRRTFSSSPDNDLTDLSESPSSDPLL 60

Query: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120
           RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST
Sbjct: 61  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLPSTSHLPPIANLLHNFANPLSPEQSLST 120

Query: 121 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHEV 163
           TTVRGWPSSHFFIQG+HLPSLEPEVETNSAECEASQHSDHE+
Sbjct: 121 TTVRGWPSSHFFIQGAHLPSLEPEVETNSAECEASQHSDHEL 158

[Close]

BLAST of CmaCh14G011890 vs. TAIR 10
Match: AT1G16840.4 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25
Identity = 76/161 (47.20%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 2   SLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLLR 61
           SLSLSK R        + L P      F  QS DRR      + D +  S+SP SDPL++
Sbjct: 8   SLSLSKGR---FAAASSSLLPSSHLVSFRSQSSDRR--GDLYEIDTSAASQSP-SDPLIQ 67

Query: 62  NLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIANLLHNFANPLSPEQSLST 121
            LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA L+   ANPL+ E+SLST
Sbjct: 68  KLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLST 127

Query: 122 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE 162
            +  GWPSS +F++G     +E + ET S    +  HS+ E
Sbjct: 128 NSSHGWPSSDYFLKGVQPQLMETKTETTS---NSESHSEDE 159

[Close]

BLAST of CmaCh14G011890 vs. TAIR 10
Match: AT1G16840.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25
Identity = 76/161 (47.20%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 2   SLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLLR 61
           SLSLSK R        + L P      F  QS DRR      + D +  S+SP SDPL++
Sbjct: 8   SLSLSKGR---FAAASSSLLPSSHLVSFRSQSSDRR--GDLYEIDTSAASQSP-SDPLIQ 67

Query: 62  NLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIANLLHNFANPLSPEQSLST 121
            LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA L+   ANPL+ E+SLST
Sbjct: 68  KLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLST 127

Query: 122 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE 162
            +  GWPSS +F++G     +E + ET S    +  HS+ E
Sbjct: 128 NSSHGWPSSDYFLKGVQPQLMETKTETTS---NSESHSEDE 159

[Close]

BLAST of CmaCh14G011890 vs. TAIR 10
Match: AT1G16840.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-25
Identity = 76/161 (47.20%), Postives = 95/161 (59.01%), Query Frame = 0


Query: 2   SLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLLR 61
           SLSLSK R        + L P      F  QS DRR      + D +  S+SP SDPL++
Sbjct: 8   SLSLSKGR---FAAASSSLLPSSHLVSFRSQSSDRR--GDLYEIDTSAASQSP-SDPLIQ 67

Query: 62  NLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIANLLHNFANPLSPEQSLST 121
            LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA L+   ANPL+ E+SLST
Sbjct: 68  KLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLST 127

Query: 122 TTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE 162
            +  GWPSS +F++G     +E + ET S    +  HS+ E
Sbjct: 128 NSSHGWPSSDYFLKGVQPQLMETKTETTS---NSESHSEDE 159

[Close]

BLAST of CmaCh14G011890 vs. TAIR 10
Match: AT1G16840.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G78890.1); Has 71 Blast hits to 71 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 110.5 bits (275), Expect = 1.3e-24
Identity = 70/137 (51.09%), Postives = 86/137 (62.77%), Query Frame = 0


Query: 2   SLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSESPSSDPLLR 61
           SLSLSK R        + L P      F  QS DRR      + D +  S+SP SDPL++
Sbjct: 8   SLSLSKGR---FAAASSSLLPSSHLVSFRSQSSDRR--GDLYEIDTSAASQSP-SDPLIQ 67

Query: 62  NLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIANLLHNFANPLSPEQSLST 121
            LEDA+ RI VRR+ PDWLPFVPGASYWVP P S S    IA L+   ANPL+ E+SLST
Sbjct: 68  KLEDAVHRIFVRRAQPDWLPFVPGASYWVPPPGSGSQSHGIAQLVVKLANPLTHEESLST 127

Query: 122 TTVRGWPSSHFFIQGSH 138
            +  GWPSS +F++GS+
Sbjct: 128 NSSHGWPSSDYFLKGSY 138

[Close]

BLAST of CmaCh14G011890 vs. TAIR 10
Match: AT1G78890.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16840.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 110.2 bits (274), Expect = 1.6e-24
Identity = 76/162 (46.91%), Postives = 99/162 (61.11%), Query Frame = 0


Query: 2   SLSLSKSRSLTLTLTLNLLRPRPRPRPFPLQSLDRRTFSSSTDNDLTDLSE-SPSSDPLL 61
           SLS S S S       +LL P  +      QS +RR    S  N L  + E   ++DPL+
Sbjct: 4   SLSPSLSLSRYRFAAASLLLPSSQTIFIRSQSSNRR----SNSNHLGVIYEIDIAADPLV 63

Query: 62  RNLEDAIQRILVRRSAPDWLPFVPGASYWVPLP-STSHLPPIANLLHNFANPLSPEQSLS 121
             LEDA+ RI+VRRSAPDWLPFVPGAS+WVP P S SH   IA L+   ANP+S E+S+S
Sbjct: 64  NKLEDAVHRIMVRRSAPDWLPFVPGASFWVPPPRSQSH--GIAKLVEKLANPISDEESIS 123

Query: 122 TTTVRGWPSSHFFIQGSHLPSLEPEVETNSAECEASQHSDHE 162
            ++VRGWP S +FI+G    S+E E+ +N+A      HS+ E
Sbjct: 124 ISSVRGWPCSDYFIKGVKPQSVETEMTSNTA-----YHSEDE 154

The following BLAST results are available for this feature:

BLAST of CmaCh14G011890 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G011890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J031	8.3e-85	100.00	uncharacterized protein LOC111480015 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1J062	7.1e-84	99.38	uncharacterized protein LOC111480015 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GVG9	7.1e-76	93.87	uncharacterized protein LOC111457911 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GVQ5	1.2e-75	93.83	uncharacterized protein LOC111457911 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0K9L9	3.1e-55	77.30	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G419630 PE=4 SV=1	[more]

BLAST of CmaCh14G011890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022980734.1	1.7e-84	100.00	uncharacterized protein LOC111480015 isoform X2 [Cucurbita maxima]	[more]
XP_022980733.1	1.5e-83	99.38	uncharacterized protein LOC111480015 isoform X1 [Cucurbita maxima]	[more]
KAG7018211.1	2.3e-76	94.48	hypothetical protein SDJN02_20079, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022956127.1	1.5e-75	93.87	uncharacterized protein LOC111457911 isoform X2 [Cucurbita moschata]	[more]
XP_022956126.1	2.5e-75	93.83	uncharacterized protein LOC111457911 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh14G011890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16840.4	2.5e-25	47.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.3	2.5e-25	47.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.1	2.5e-25	47.20	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G16840.2	1.3e-24	51.09	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G78890.1	1.6e-24	46.91	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 34..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..163
None	No IPR available	PANTHER	PTHR33972:SF16	REPETITIVE MATRIX PROTEIN 2, PUTATIVE ISOFORM 1-RELATED	coord: 23..151
None	No IPR available	PANTHER	PTHR33972	EXPRESSED PROTEIN	coord: 23..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G011890.1	CmaCh14G011890.1	mRNA