CmaCh14G011520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G011520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome b6
Location	Cma_Chr14: 9088112 .. 9089784 (-)
RNA-Seq Expression	CmaCh14G011520
Synteny	CmaCh14G011520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TACAAGTAGCTACGGGGTTTGCTATGACTTTTTACTATCGTCCGACCGTTACTAAGGCTTTTGCTTATGTTCAATATATAATGATGGAAGCTTACTTTGGTTGGTTAATCCGATCAGTTCATAAATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAATTTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTTGCCTTTGGTAGAGTTATTACGCGGTAGTGCTAGTGTGGGACAATCTTCCATGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTCCTTTATAGAGAATCGAAATCATAGATTTGTAATTAGTTATTTATGATTACTCGGGGGAGGAAGAAGAGTATTTCATTGCTGCAAATATGTCTTATTGAAAAATAAGACATGTATTGGGATATTTCCCTTCAACTCCACGAAATTTTATTCGTTATTTTTCAATAATAGTTGAAGGGAATTCTTCGAAGAGAAAATGGATTATGGGAGTGTGTGATTTGAACTATTGATTCGGCCGTGTGGATATATGTCTTTTTATCTGCCACATTGGGATTCACAACCAAATGTGTCTTTATTCCAACCACCGCGAAAGCTCCATACAGAGGGTAGGCTGGTTCGCTTGAAGAGAATCTTTTCTATGATCAGACTTGACCATGTCGTGCATGACCAGGCTCCGTAAGATCCAGTAGAATAGGTGATATATCTGGCATAATTCAGATTATGTTTTATCTATTTCACTTACTTAATCGTATGAAAATGCATTCATTTCCTCTGCATTGACTCGATTTATGATACTATCGGAGTGAAACAAGGGATCTAAAGAAGAACATAGGCTAGACTCTATTAGTAACAAGTAAATCCTTTGCTTTGGATGTAAAAAGTATCCATATTTTAATTTTTCTTTGGGAGCTAAAGCCCCATCGCAAGGTCTGAGACGACCCAGAAAGCACTTGAACATTATCAACTTTGTAAGCCTACTTGGGTATTGAGCATTTATGTGTAAGAATTGAATTCGGTGCAATGGATAATTGTAACTCTGAAAACAGAATCCGCTAAATTTTTTTCTTACATGGAATTAATCATTTATTTTATAATGCTTGGATAAGATAGCGATTTTTTATCTGCATCCAGTTGGTTCGTTTGATTTGTGCTCGAACCGGATGATGAAAAATTATCATGTCCGGTTCTTTCAGGGGATGGGTCCATAATAATTCACCTATCCTAATAACAAAAAAATCCGATTTGAATGATCATGTATTAAGAGCTAAATTGGCTAAGGGTTGGGTCATAATTATTACGGAGAACCCACATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTAATTCCAGGTACTATTGCATGTAACGTGGGTTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAAATCCATTTGCAACTCCTTTGGAAATATTGTCGGAA

mRNA sequence

TACAAGTAGCTACGGGGTTTGCTATGACTTTTTACTATCGTCCGACCGTTACTAAGGCTTTTGCTTATGTTCAATATATAATGATGGAAGCTTACTTTGGTTGGTTAATCCGATCAGTTCATAAATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAATTTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTTGCCTTTGGTAGAGTTATTACGCGGTAGTGCTAGTGTGGGACAATCTTCCATGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTACTATTGCATGTAACGTGGGTTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAAATCCATTTGCAACTCCTTTGGAAATATTGTCGGAA

Coding sequence (CDS)

ATGACTTTTTACTATCGTCCGACCGTTACTAAGGCTTTTGCTTATGTTCAATATATAATGATGGAAGCTTACTTTGGTTGGTTAATCCGATCAGTTCATAAATGGTCGGCAAGTATGATGGTCTTAATGATGATCCTGCACGTATTTCGCGTGTATCTTACTGGTGGATTTAAAAAACCTCGTGAATTGACTTGGGTTACAGGTGTGGTTCTGGCTGTATTGACCGCATCCTTTGGTGTAACTGGTTATTCCTTACCTCGGGACCAAATTGGTTATTGGGCAGTCAAATTTGTAACAGGTGTACCGGAAGCTATTCCAGTAATAGGGTTGCCTTTGGTAGAGTTATTACGCGGTAGTGCTAGTGTGGGACAATCTTCCATGACTCGTTTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGCCGTATTTATGTTAATGCACTTCCCAATGATACGTAAGCAAGGCATTTCTGGTACTATTGCATGTAACGTGGGTTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAAATCCATTTGCAACTCCTTTGGAAATATTGTCGGAA

Protein sequence

MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSASVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTIACNVGLAVLEPSMIGEPANPFATPLEILSE

Homology

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BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot
Match: A0A365 (Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-80
Identity = 151/162 (93.21%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot
Match: Q4VZI6 (Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.4e-80
Identity = 151/162 (93.21%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot
Match: Q0G9I9 (Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-80
Identity = 150/162 (92.59%), Postives = 156/162 (96.30%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGV+LAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVILAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot
Match: Q0G9T2 (Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-80
Identity = 151/162 (93.21%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot
Match: Q68RX7 (Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.4e-80
Identity = 151/162 (93.21%), Postives = 155/162 (95.68%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTDAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL
Match: A0A443Q4G6 (Cytochrome b OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02736900 PE=3 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.2e-92
Identity = 179/193 (92.75%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 85  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 144

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 145 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 204

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQ-GISGTIACNVGLAVLEPSMIGEP 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQ  I GTIACNVGLAVLEPSMIGEP
Sbjct: 205 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQVVILGTIACNVGLAVLEPSMIGEP 264

Query: 181 ANPFATPLEILSE 193
           A+PFATPLEIL E
Sbjct: 265 ADPFATPLEILPE 277

[Close]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL
Match: A0A4Y7JGN8 (Cytochrome b OS=Papaver somniferum OX=3469 GN=C5167_006516 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.7e-92
Identity = 177/196 (90.31%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGG KKP
Sbjct: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGLKKP 60

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGV+L VLTASFGVTGYSLPRDQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 61  RELTWVTGVILGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 120

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS----GTIACNVGLAVLEPSMI 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS    GTIACNVGLAVLEPSMI
Sbjct: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISVVILGTIACNVGLAVLEPSMI 180

Query: 181 GEPANPFATPLEILSE 193
           GEPA+PFATPLEIL E
Sbjct: 181 GEPADPFATPLEILPE 196

[Close]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL
Match: A0A1U8FNI4 (Cytochrome b OS=Capsicum annuum OX=4072 GN=LOC107860072 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 179/242 (73.97%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 135 MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 194

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 195 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 254

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG----------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQG                       
Sbjct: 255 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGWIYKNSPIPITKKPDLNDPVLRA 314

Query: 181 ---------------------------ISGTIACNVGLAVLEPSMIGEPANPFATPLEIL 193
                                      I GTIACNVGLAVLEPSMIGEPA+PFATPLEIL
Sbjct: 315 KLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEIL 374

[Close]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL
Match: T1L7H0 (Cytochrome b OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 3.6e-87
Identity = 175/227 (77.09%), Postives = 184/227 (81.06%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AF+ VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 28  MTFYYRPTVTEAFSSVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 87

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 88  RELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 147

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS--------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQ ++                     
Sbjct: 148 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQDLNDPVLRAKLAKGMGHNYYGEPA 207

Query: 181 --------------GTIACNVGLAVLEPSMIGEPANPFATPLEILSE 193
                         GTIACNVGLAVLEPSMIGEPA+PFATPLEIL E
Sbjct: 208 WPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPE 254

[Close]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL
Match: A0A151R2C1 (Cytochrome b OS=Cajanus cajan OX=3821 GN=KK1_042080 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86
Identity = 175/216 (81.02%), Postives = 180/216 (83.33%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 60

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVK VTGVPEAIPVIG  LVELLRGSA
Sbjct: 61  RELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSA 120

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG----------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMI K                         
Sbjct: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIPKLAKGMGHNYYGEPAWPNDLLYIFPV 180

Query: 181 -ISGTIACNVGLAVLEPSMIGEPANPFATPLEILSE 193
            I GTIACNVGLAVLEPSMIGEPA+PFATPLEIL E
Sbjct: 181 VILGTIACNVGLAVLEPSMIGEPADPFATPLEILPE 216

[Close]

BLAST of CmaCh14G011520 vs. NCBI nr
Match: RWR97899.1 (photosystem II CP47 reaction center-like protein [Cinnamomum micranthum f. kanehirae])

HSP 1 Score: 348.2 bits (892), Expect = 4.5e-92
Identity = 179/193 (92.75%), Postives = 184/193 (95.34%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 85  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 144

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 145 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 204

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQ-GISGTIACNVGLAVLEPSMIGEP 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQ  I GTIACNVGLAVLEPSMIGEP
Sbjct: 205 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQVVILGTIACNVGLAVLEPSMIGEP 264

Query: 181 ANPFATPLEILSE 193
           A+PFATPLEIL E
Sbjct: 265 ADPFATPLEILPE 277

[Close]

BLAST of CmaCh14G011520 vs. NCBI nr
Match: RZC59212.1 (hypothetical protein C5167_006516 [Papaver somniferum])

HSP 1 Score: 347.4 bits (890), Expect = 7.7e-92
Identity = 177/196 (90.31%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGG KKP
Sbjct: 1   MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGLKKP 60

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGV+L VLTASFGVTGYSLPRDQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 61  RELTWVTGVILGVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 120

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS----GTIACNVGLAVLEPSMI 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS    GTIACNVGLAVLEPSMI
Sbjct: 121 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISVVILGTIACNVGLAVLEPSMI 180

Query: 181 GEPANPFATPLEILSE 193
           GEPA+PFATPLEIL E
Sbjct: 181 GEPADPFATPLEILPE 196

[Close]

BLAST of CmaCh14G011520 vs. NCBI nr
Match: XP_027339151.1 (cytochrome b-like [Abrus precatorius] >XP_027339166.1 cytochrome b-like [Abrus precatorius])

HSP 1 Score: 332.4 bits (851), Expect = 2.6e-87
Identity = 178/230 (77.39%), Postives = 184/230 (80.00%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 124 MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 183

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVK VTGVPEAIPVIG  LVELLRGS+
Sbjct: 184 RELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSS 243

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS--------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQGIS                     
Sbjct: 244 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISDLNDPVLRAKLAKGMGHNYYG 303

Query: 181 -----------------GTIACNVGLAVLEPSMIGEPANPFATPLEILSE 193
                            GTIACNVGLAVLEPSMIGEPA+PFATPLEIL E
Sbjct: 304 EPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPE 353

[Close]

BLAST of CmaCh14G011520 vs. NCBI nr
Match: XP_016560777.1 (PREDICTED: cytochrome b-like [Capsicum annuum])

HSP 1 Score: 331.6 bits (849), Expect = 4.4e-87
Identity = 179/242 (73.97%), Postives = 185/242 (76.45%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 135 MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 194

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 195 RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 254

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG----------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQG                       
Sbjct: 255 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGWIYKNSPIPITKKPDLNDPVLRA 314

Query: 181 ---------------------------ISGTIACNVGLAVLEPSMIGEPANPFATPLEIL 193
                                      I GTIACNVGLAVLEPSMIGEPA+PFATPLEIL
Sbjct: 315 KLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEIL 374

[Close]

BLAST of CmaCh14G011520 vs. NCBI nr
Match: XP_028122056.1 (uncharacterized protein LOC114319249 [Camellia sinensis])

HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 179/242 (73.97%), Postives = 184/242 (76.03%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 647 MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 706

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVLAVLTASFGVTGYSLP DQIGYWAVK VTGVPEAIPVIG PLVELLRGSA
Sbjct: 707 RELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSA 766

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG----------------------- 180
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHFPMIRKQG                       
Sbjct: 767 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGWIYKNSPIPITKKPDLNDPVLRA 826

Query: 181 ---------------------------ISGTIACNVGLAVLEPSMIGEPANPFATPLEIL 193
                                      I GTIACNVGLAVLEPSMIGEPA+PFATPLEIL
Sbjct: 827 KLAKGMGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEIL 886

[Close]

BLAST of CmaCh14G011520 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 290.8 bits (743), Expect = 8.0e-79
Identity = 147/162 (90.74%), Postives = 153/162 (94.44%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           MTFYYRPTVT+AFA VQYIM EA FGWLIRSVH+WSASMMVLMMILHVFRVYLTGGFKKP
Sbjct: 54  MTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKP 113

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RELTWVTGVVL VLTASFGVTGYSLP DQIGYWAVK VTGVP+AIPVIG PLVELLRGSA
Sbjct: 114 RELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSA 173

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQGISGTI 163
           SVGQS++TRFYSLHTFVLPLLTAVFMLMHF MIRKQGISG +
Sbjct: 174 SVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215

[Close]

BLAST of CmaCh14G011520 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           +  +Y P V  AF  V++IM +   GWL+R +H   ASM ++++ LH+FR      +  P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RE  W  GVV+ +L       GY LP  Q+ +W    +T +  AIPV+G  +V  L G  
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGF 175

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG 158
           SV  +++ RF+SLH  +LP +     L+H   + + G
Sbjct: 176 SVDNATLNRFFSLH-HLLPFILVGASLLHLAALHQYG 211

[Close]

BLAST of CmaCh14G011520 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 55/157 (35.03%), Postives = 85/157 (54.14%), Query Frame = 0


Query: 1   MTFYYRPTVTKAFAYVQYIMMEAYFGWLIRSVHKWSASMMVLMMILHVFRVYLTGGFKKP 60
           +  +Y P V  AF  V++IM +   GWL+R +H   ASM ++++ LH+FR      +  P
Sbjct: 56  LAMHYTPHVDLAFNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSP 115

Query: 61  RELTWVTGVVLAVLTASFGVTGYSLPRDQIGYWAVKFVTGVPEAIPVIGLPLVELLRGSA 120
           RE  W  GVV+ +L       GY LP  Q+ +W    +T +  AIPV+G  +V  L G  
Sbjct: 116 REFVWCLGVVIFLLMIVTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGF 175

Query: 121 SVGQSSMTRFYSLHTFVLPLLTAVFMLMHFPMIRKQG 158
           SV  +++ RF+SLH  +LP +     L+H   + + G
Sbjct: 176 SVDNATLNRFFSLH-HLLPFILVGASLLHLAALHQYG 211

[Close]

BLAST of CmaCh14G011520 vs. TAIR 10
Match: ATCG00730.1 (photosynthetic electron transfer D )

HSP 1 Score: 66.6 bits (161), Expect = 2.4e-11
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0


Query: 146 MLMHFPMIRKQGISGTIACNVGLAVLEPSMIGEPANPFATPLEILSE 193
           +L  FP++    I GTIACNVGLAVLEPSMIGEPA+PFATPLEIL E
Sbjct: 36  LLYIFPVV----ILGTIACNVGLAVLEPSMIGEPADPFATPLEILPE 78

The following BLAST results are available for this feature:

BLAST of CmaCh14G011520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A365	1.4e-80	93.21	Cytochrome b6 OS=Coffea arabica OX=13443 GN=petB PE=3 SV=1	[more]
Q4VZI6	1.4e-80	93.21	Cytochrome b6 OS=Cucumis sativus OX=3659 GN=petB PE=3 SV=1	[more]
Q0G9I9	1.8e-80	92.59	Cytochrome b6 OS=Liriodendron tulipifera OX=3415 GN=petB PE=3 SV=1	[more]
Q0G9T2	2.4e-80	93.21	Cytochrome b6 OS=Daucus carota OX=4039 GN=petB PE=3 SV=1	[more]
Q68RX7	2.4e-80	93.21	Cytochrome b6 OS=Panax ginseng OX=4054 GN=petB PE=3 SV=1	[more]

BLAST of CmaCh14G011520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A443Q4G6	2.2e-92	92.75	Cytochrome b OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02736900 PE...	[more]
A0A4Y7JGN8	3.7e-92	90.31	Cytochrome b OS=Papaver somniferum OX=3469 GN=C5167_006516 PE=4 SV=1	[more]
A0A1U8FNI4	2.1e-87	73.97	Cytochrome b OS=Capsicum annuum OX=4072 GN=LOC107860072 PE=3 SV=1	[more]
T1L7H0	3.6e-87	77.09	Cytochrome b OS=Triticum urartu OX=4572 PE=4 SV=1	[more]
A0A151R2C1	1.4e-86	81.02	Cytochrome b OS=Cajanus cajan OX=3821 GN=KK1_042080 PE=3 SV=1	[more]

BLAST of CmaCh14G011520 vs. NCBI nr


Match Name	E-value	Identity	Description
RWR97899.1	4.5e-92	92.75	photosystem II CP47 reaction center-like protein [Cinnamomum micranthum f. kaneh...	[more]
RZC59212.1	7.7e-92	90.31	hypothetical protein C5167_006516 [Papaver somniferum]	[more]
XP_027339151.1	2.6e-87	77.39	cytochrome b-like [Abrus precatorius] >XP_027339166.1 cytochrome b-like [Abrus p...	[more]
XP_016560777.1	4.4e-87	73.97	PREDICTED: cytochrome b-like [Capsicum annuum]	[more]
XP_028122056.1	1.7e-86	73.97	uncharacterized protein LOC114319249 [Camellia sinensis]	[more]

BLAST of CmaCh14G011520 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00720.1	8.0e-79	90.74	photosynthetic electron transfer B	[more]
AT2G07727.1	1.8e-22	35.03	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	1.8e-22	35.03	apocytochrome b	[more]
ATCG00730.1	2.4e-11	74.47	photosynthetic electron transfer D	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 1..157 e-value: 6.7E-66 score: 221.7
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..162 score: 28.86244
IPR005797	Cytochrome b/b6, N-terminal	CDD	cd00284	Cytochrome_b_N	coord: 1..159 e-value: 4.57506E-70 score: 209.532
None	No IPR available	PIRSF	PIRSF000032	Cytochrome_b6	coord: 1..162 e-value: 3.0E-80 score: 266.8
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..161
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..165 e-value: 3.6E-64 score: 218.6
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 1..161
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G011520.1	CmaCh14G011520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009521	photosystem
cellular_component	GO:0070469	respirasome
cellular_component	GO:0042651	thylakoid membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity