CmaCh14G008520 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA ATGGCGCCTTCCGCCGCCATTCCGCTGTCCCTTTCGTTTCTCTTCCTCTTCCTTCACCTCGCCAACTCCCAACCCGTCTCGCCGGTCGATCCGCAAGATCCCAATTCCGAAATAAAATGTGGATCATGCCCTTGTTCCAACCCATGTGTTAAACAATTCCCTCCTCCACCGCCACCGCCGCCGCCGAATTGCAAGCCAGCGCTGCCGCCGCCACCACCGCCTCCCAGGTTTATTTATACATCGCTGTCTCCACCACCACCTCCAAGGTTTATTTACACAACAGGTGTACCCGGTAACCTGTATCAGATCGATGCCAATAATCGTTGGTATTACTTCTCCGGCACAACCAGGAACTGGTCAGCCACGGCGGCACTCGTGGTGGCGCTTGGCTGTGGAGCTTTGAATCTCATGGCGTTTGGTAAGTGGTAA MAPSAAIPLSLSFLFLFLHLANSQPVSPVDPQDPNSEIKCGSCPCSNPCVKQFPPPPPPPPPNCKPALPPPPPPPRFIYTSLSPPPPPRFIYTTGVPGNLYQIDANNRWYYFSGTTRNWSATAALVVALGCGALNLMAFGKW Homology
BLAST of CmaCh14G008520 vs. ExPASy TrEMBL
Match: A0A6J1J7W0 (probable pathogenesis-related protein ARB_02861 OS=Cucurbita maxima OX=3661 GN=LOC111482528 PE=4 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 3.4e-74 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CmaCh14G008520 vs. ExPASy TrEMBL
Match: A0A5A7V4T2 (Formin-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00500 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42 Identity = 102/147 (69.39%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of CmaCh14G008520 vs. ExPASy TrEMBL
Match: A0A0A0L7R0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346900 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.5e-42 Identity = 102/150 (68.00%), Postives = 113/150 (75.33%), Query Frame = 0
BLAST of CmaCh14G008520 vs. ExPASy TrEMBL
Match: A0A6J1GAW3 (leucine-rich repeat extensin-like protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111452509 PE=4 SV=1) HSP 1 Score: 122.9 bits (307), Expect = 1.1e-24 Identity = 82/145 (56.55%), Postives = 90/145 (62.07%), Query Frame = 0
BLAST of CmaCh14G008520 vs. ExPASy TrEMBL
Match: A0A2N9I535 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47001 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.6e-20 Identity = 67/126 (53.17%), Postives = 79/126 (62.70%), Query Frame = 0
BLAST of CmaCh14G008520 vs. NCBI nr
Match: XP_022984145.1 (probable pathogenesis-related protein ARB_02861 [Cucurbita maxima]) HSP 1 Score: 287.3 bits (734), Expect = 7.0e-74 Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
BLAST of CmaCh14G008520 vs. NCBI nr
Match: KAG7017949.1 (hypothetical protein SDJN02_19815, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.8 bits (691), Expect = 6.8e-69 Identity = 137/142 (96.48%), Postives = 138/142 (97.18%), Query Frame = 0
BLAST of CmaCh14G008520 vs. NCBI nr
Match: KAG6581215.1 (hypothetical protein SDJN03_21217, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68 Identity = 138/143 (96.50%), Postives = 139/143 (97.20%), Query Frame = 0
BLAST of CmaCh14G008520 vs. NCBI nr
Match: XP_023528316.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 268.9 bits (686), Expect = 2.6e-68 Identity = 136/143 (95.10%), Postives = 138/143 (96.50%), Query Frame = 0
BLAST of CmaCh14G008520 vs. NCBI nr
Match: KAA0060761.1 (formin-like protein 3 [Cucumis melo var. makuwa] >TYK01496.1 formin-like protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 182.2 bits (461), Expect = 3.2e-42 Identity = 102/147 (69.39%), Postives = 113/147 (76.87%), Query Frame = 0
BLAST of CmaCh14G008520 vs. TAIR 10
Match: AT3G03350.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 53.5 bits (127), Expect = 1.6e-07 Identity = 28/68 (41.18%), Postives = 41/68 (60.29%), Query Frame = 0
BLAST of CmaCh14G008520 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein ) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 37/76 (48.68%), Postives = 43/76 (56.58%), Query Frame = 0
BLAST of CmaCh14G008520 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein ) HSP 1 Score: 45.1 bits (105), Expect = 5.6e-05 Identity = 40/101 (39.60%), Postives = 49/101 (48.51%), Query Frame = 0
BLAST of CmaCh14G008520 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of CmaCh14G008520 vs. TAIR 10
Match: AT3G22800.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04 Identity = 33/68 (48.53%), Postives = 39/68 (57.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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