CmaCh14G007740 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G007740
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	chalcone synthase-like
Location	Cma_Chr14: 3856709 .. 3857122 (-)
RNA-Seq Expression	CmaCh14G007740
Synteny	CmaCh14G007740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTCCGTCACCGACATCCGCAAGGCTCAACGAGCCAATGGCCCCCCTATCATTCTCGCCATCGACACCGCTGCACCCCAACATCATTCTCTAGTCTGGCTATCTCAACTTCTACTTTCGCATAACTAATTCCAAGCATATGACTATCCTCAAGGACAAATTTGTTCGAATGCATATGTAAACAACGGTTTACTGATATTTATTTATTTAATCCACAGTTAACAGAGATATACTGATGTTCATGAATTACATTATTGAATTTATTAGAATAATTCCGCTAAATTTTGAGAAATGTTATTATGACATTGACATGCAAGTGAGAAGTCTATGATCAGGAAGCGTCACATGTACCTAACGGAGGAAATTCTTAAAGAGAATCAAATATGTGCGAGCACTTGGCACCTTCTCTAG

mRNA sequence

ATGGCCTCCGTCACCGACATCCGCAAGGCTCAACGAGCCAATGGCCCCCCTATCATTCTCGCCATCGACACCGCTGCACCCCAACATCATTCTCTATCTATGATCAGGAAGCGTCACATGTACCTAACGGAGGAAATTCTTAAAGAGAATCAAATATGTGCGAGCACTTGGCACCTTCTCTAG

Coding sequence (CDS)

ATGGCCTCCGTCACCGACATCCGCAAGGCTCAACGAGCCAATGGCCCCCCTATCATTCTCGCCATCGACACCGCTGCACCCCAACATCATTCTCTATCTATGATCAGGAAGCGTCACATGTACCTAACGGAGGAAATTCTTAAAGAGAATCAAATATGTGCGAGCACTTGGCACCTTCTCTAG

Protein sequence

MASVTDIRKAQRANGPPIILAIDTAAPQHHSLSMIRKRHMYLTEEILKENQICASTWHLL

Homology

[Close]

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot
Match: Q9XJ57 (Chalcone synthase 2 OS=Citrus sinensis OX=2711 GN=CHS2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.2e-07
Identity = 36/85 (42.35%), Postives = 43/85 (50.59%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHH------------------------------ 55
          MA+V +IR AQRA+GP  +LAI TA P H                               
Sbjct: 1  MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot
Match: Q01288 (Chalcone synthase 6 OS=Pisum sativum OX=3888 GN=CHS6 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 7.2e-07
Identity = 35/80 (43.75%), Postives = 43/80 (53.75%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAP-------------------QHHSL--------- 51
          M SV++IRKAQRA GP  ILAI TA P                   +H ++         
Sbjct: 1  MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot
Match: O22046 (Chalcone synthase E OS=Ipomoea nil OX=35883 GN=CHSE PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 9.4e-07
Identity = 36/85 (42.35%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQH------------------HSL---------- 55
          M +V ++RKAQRA GP  I+AI T+ PQ+                  H +          
Sbjct: 1  MVTVEEVRKAQRAQGPATIMAIGTSTPQNCVDQSTYPDYYFRITNSEHLVELKEKFKRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot
Match: P48386 (Chalcone synthase 1 OS=Camellia sinensis OX=4442 GN=CHS1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-06
Identity = 35/84 (41.67%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAP-------------------QHHS---------- 54
          M +V DIR+AQRA GP  ++AI TA P                   +H +          
Sbjct: 1  MVTVEDIRRAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSEHKAELKEKFKRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot
Match: Q9SEP4 (Chalcone synthase OS=Arabis alpina OX=50452 GN=CHS PE=3 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.2e-06
Identity = 36/83 (43.37%), Postives = 43/83 (51.81%), Query Frame = 0


Query: 3  SVTDIRKAQRANGPPIILAIDTAAPQHHSL------------------------------ 55
          S+ +IRKAQRA+GP  IL I TA P +H L                              
Sbjct: 4  SLEEIRKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDK 63

[Close]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL
Match: A0A444ZE79 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g070019 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.0e-08
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSLSMIRKRHMYLTEEILKEN-QICA 55
          M +V++IRKAQRA GP  I+AI TA P +   SMI+KR+MYLTEE+LKEN  +CA
Sbjct: 1  MVNVSEIRKAQRAEGPATIMAIGTATPPNCDKSMIKKRYMYLTEEMLKENPNMCA 55

[Close]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL
Match: V7CIC8 (Chal_sti_synt_N domain-containing protein (Fragment) OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G0392001g PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.6e-07
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSLSMIRKRHMYLTEEILKEN-QICA 55
          M SV++IR+AQRA GP  ILAI TA P +   SMI+KR+M+L EEILKEN  +CA
Sbjct: 1  MVSVSEIRQAQRAEGPANILAIGTATPSNCDKSMIKKRYMHLNEEILKENPNMCA 55

[Close]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL
Match: A0A6J1F2F9 (chalcone synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111441532 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.7e-07
Identity = 41/80 (51.25%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAP-------------------QHHSL--------- 51
          MASVTDIRKAQRANGP  ILAI TA P                   +H ++         
Sbjct: 1  MASVTDIRKAQRANGPATILAIGTAVPPNIVLQSDYPDYYFRITNSEHMTVLKEKFVRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL
Match: A0A6J1F1I9 (chalcone synthase 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSL---------------------------- 55
          MASV +IR+AQRANGP  +LAI TA P +  L                            
Sbjct: 1  MASVAEIREAQRANGPATVLAIGTATPPNSVLQSDYPDYYFRITKSEHMTVLKEKFVRMC 60

[Close]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL
Match: A0A6J1F7E0 (chalcone synthase 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-06
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSL---------------------------- 55
          MASV +IR+AQRANGP  +LAI TA P +  L                            
Sbjct: 1  MASVAEIREAQRANGPATVLAIGTATPPNSVLQSDYPDYYFRITKSEHMTVLKEKFVRMC 60

[Close]

BLAST of CmaCh14G007740 vs. NCBI nr
Match: RYR12477.1 (hypothetical protein Ahy_B04g070019 isoform D [Arachis hypogaea])

HSP 1 Score: 66.6 bits (161), Expect = 8.2e-08
Identity = 34/55 (61.82%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSLSMIRKRHMYLTEEILKEN-QICA 55
          M +V++IRKAQRA GP  I+AI TA P +   SMI+KR+MYLTEE+LKEN  +CA
Sbjct: 1  MVNVSEIRKAQRAEGPATIMAIGTATPPNCDKSMIKKRYMYLTEEMLKENPNMCA 55

[Close]

BLAST of CmaCh14G007740 vs. NCBI nr
Match: XP_007157051.1 (hypothetical protein PHAVU_002G0392001g, partial [Phaseolus vulgaris] >ESW29045.1 hypothetical protein PHAVU_002G0392001g, partial [Phaseolus vulgaris])

HSP 1 Score: 63.9 bits (154), Expect = 5.3e-07
Identity = 34/55 (61.82%), Postives = 42/55 (76.36%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSLSMIRKRHMYLTEEILKEN-QICA 55
          M SV++IR+AQRA GP  ILAI TA P +   SMI+KR+M+L EEILKEN  +CA
Sbjct: 1  MVSVSEIRQAQRAEGPANILAIGTATPSNCDKSMIKKRYMHLNEEILKENPNMCA 55

[Close]

BLAST of CmaCh14G007740 vs. NCBI nr
Match: XP_022934337.1 (chalcone synthase-like [Cucurbita moschata])

HSP 1 Score: 62.8 bits (151), Expect = 1.2e-06
Identity = 41/80 (51.25%), Postives = 44/80 (55.00%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAP-------------------QHHSL--------- 51
          MASVTDIRKAQRANGP  ILAI TA P                   +H ++         
Sbjct: 1  MASVTDIRKAQRANGPATILAIGTAVPPNIVLQSDYPDYYFRITNSEHMTVLKEKFVRMC 60

[Close]

BLAST of CmaCh14G007740 vs. NCBI nr
Match: KAG4990820.1 (hypothetical protein JHK87_024277 [Glycine soja])

HSP 1 Score: 61.6 bits (148), Expect = 2.6e-06
Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAP----QHHSLSMIRKRHMYLTEEILKEN-QICA 55
          M SV +IRKAQRA GP  ++AI TA P         SMI+KR+MYL EEILKEN  +CA
Sbjct: 1  MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSDKSMIKKRYMYLNEEILKENPSVCA 59

[Close]

BLAST of CmaCh14G007740 vs. NCBI nr
Match: XP_022934336.1 (chalcone synthase 2 isoform X2 [Cucurbita moschata])

HSP 1 Score: 61.2 bits (147), Expect = 3.4e-06
Identity = 40/85 (47.06%), Postives = 45/85 (52.94%), Query Frame = 0


Query: 1  MASVTDIRKAQRANGPPIILAIDTAAPQHHSL---------------------------- 55
          MASV +IR+AQRANGP  +LAI TA P +  L                            
Sbjct: 1  MASVAEIREAQRANGPATVLAIGTATPPNSVLQSDYPDYYFRITKSEHMTVLKEKFVRMC 60

[Close]

BLAST of CmaCh14G007740 vs. TAIR 10
Match: AT5G13930.1 (Chalcone and stilbene synthase family protein )

HSP 1 Score: 52.0 bits (123), Expect = 1.9e-07
Identity = 35/84 (41.67%), Postives = 44/84 (52.38%), Query Frame = 0


Query: 2  ASVTDIRKAQRANGPPIILAIDTAAPQHHSL----------------------------- 55
          +S+ +IR+AQRA+GP  ILAI TA P++H L                             
Sbjct: 7  SSLDEIRQAQRADGPAGILAIGTANPENHVLQAEYPDYYFRITNSEHMTDLKEKFKRMCD 66

The following BLAST results are available for this feature:

BLAST of CmaCh14G007740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XJ57	3.2e-07	42.35	Chalcone synthase 2 OS=Citrus sinensis OX=2711 GN=CHS2 PE=2 SV=1	[more]
Q01288	7.2e-07	43.75	Chalcone synthase 6 OS=Pisum sativum OX=3888 GN=CHS6 PE=2 SV=1	[more]
O22046	9.4e-07	42.35	Chalcone synthase E OS=Ipomoea nil OX=35883 GN=CHSE PE=2 SV=1	[more]
P48386	1.2e-06	41.67	Chalcone synthase 1 OS=Camellia sinensis OX=4442 GN=CHS1 PE=2 SV=1	[more]
Q9SEP4	1.2e-06	43.37	Chalcone synthase OS=Arabis alpina OX=50452 GN=CHS PE=3 SV=1	[more]

BLAST of CmaCh14G007740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A444ZE79	4.0e-08	61.82	Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B04g070019 PE=3 SV=1	[more]
V7CIC8	2.6e-07	61.82	Chal_sti_synt_N domain-containing protein (Fragment) OS=Phaseolus vulgaris OX=38...	[more]
A0A6J1F2F9	5.7e-07	51.25	chalcone synthase-like OS=Cucurbita moschata OX=3662 GN=LOC111441532 PE=3 SV=1	[more]
A0A6J1F1I9	1.7e-06	47.06	chalcone synthase 2 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=...	[more]
A0A6J1F7E0	1.7e-06	47.06	chalcone synthase 2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111441531 PE=...	[more]

BLAST of CmaCh14G007740 vs. NCBI nr


Match Name	E-value	Identity	Description
RYR12477.1	8.2e-08	61.82	hypothetical protein Ahy_B04g070019 isoform D [Arachis hypogaea]	[more]
XP_007157051.1	5.3e-07	61.82	hypothetical protein PHAVU_002G0392001g, partial [Phaseolus vulgaris] >ESW29045....	[more]
XP_022934337.1	1.2e-06	51.25	chalcone synthase-like [Cucurbita moschata]	[more]
KAG4990820.1	2.6e-06	57.63	hypothetical protein JHK87_024277 [Glycine soja]	[more]
XP_022934336.1	3.4e-06	47.06	chalcone synthase 2 isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh14G007740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13930.1	1.9e-07	41.67	Chalcone and stilbene synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016039	Thiolase-like	GENE3D	3.40.47.10		coord: 1..58 e-value: 1.5E-8 score: 36.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G007740.1	CmaCh14G007740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
molecular_function	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups
molecular_function	GO:0016746	acyltransferase activity