CmaCh14G007140 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G007140
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionSte24 endopeptidase
LocationCma_Chr14: 3608821 .. 3610034 (-)
RNA-Seq ExpressionCmaCh14G007140
SyntenyCmaCh14G007140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCACTGAACAGCTTCCATGGCTTCCTCTCCCTTTTCTTCTCTCTGCCTCGCCAGAAATTCCACTCCTTGCACAAGTGCAATCGGATCTCGACCTTCCCACAGGTTCAATTTCACTACCTTCGGAATCGGAGCGCCGATCACTAAGAGAATTAGGTCTCCGTTTGCAGAGCTGCCTCCCTCGCCTTTCGCGACCTTGATGCCGACGATTTCCGCCATTCTCTCGATAAGCAGGTTCAAAGATTTTCTCATTTTCTTACTGAATTCATGACTACGTCGTTTCTGAGATTGATGAAACCAGTTATGTCTTAGGGCGAGGCGAGGATAGTTTCTTGTTAGCTACGGAAGCGGATTTCTTTTAGCTTTACCTCCAACTGCTATGAGAATGATTATCGATTCTTCCTAGATTATGCGCATGTTCTCTTTAATACGTGAAGATTTGTTATCTTCGAGGGCTGCAGGTTTCTCTTATTGTTGCTGAATGACGAGGAAAAAAGGACTAGAAAAATTAAGAGATCAAATAGAAGGAATTGATTGGAGAGGGAGAGTTACAGTGGGAAGGATGTAAGAAAATAGAACTCAACCAAAAAAATTTAGCTCTTCTACTTGGAGCTCTTCCTAAACCAGTCTGACTTGTTCTACTTTCGTCTGGCCAGTATAGTAAACAAAATAAGATTATGATCTGTCATCGTTTCTTATAATAATTGTGATAGAAGCGTAGCTGGCATCACATGCAGAATTCGGAGGTACATACCACGGCAGAAAATAGTATCCTAATGTAATCTAAACAAATATAATCTTTGTAATTCATTTTTTTTACGATATAGAAATTCAAGCTTGGATCTGGTGTTGTGTTACCAATTTTATAGCTTTGGAACTAGAGTGAATTGATCTTTTCAATTCATTCTTTCAGCCCGCAAGAAGTTCTCATAACCAATAGGGAGTCAGCTGTCTTTCTGGATTATGATTCAACAATTAATACATCATAATCAAGTCTCTACATCTTAAAGAAAAAACTAAATCATAGTTTAGAAGTCTAATAAAAGAATTCATACCCAATTTGAAATTAAGCTCAATGGTATACCCTCTGATGTTATGGCAATATCCTTATTTATTATTATTTTGATATTTTGATAATACTTATGTTAATATCATTCTGAGTCAGCTACCTCATTGCTTAAGTCAAGAATTTTCTTTCATGCAGAATACAATGA

mRNA sequence

AAACCACTGAACAGCTTCCATGGCTTCCTCTCCCTTTTCTTCTCTCTGCCTCGCCAGAAATTCCACTCCTTGCACAAGTGCAATCGGATCTCGACCTTCCCACAGGTTCAATTTCACTACCTTCGGAATCGGAGCGCCGATCACTAAGAGAATTAGGTCTCCGTTTGCAGAGCTGCCTCCCTCGCCTTTCGCGACCTTGATGCCGACGATTTCCGCCATTCTCTCGATAAGCAGAATACAATGA

Coding sequence (CDS)

ATGGCTTCCTCTCCCTTTTCTTCTCTCTGCCTCGCCAGAAATTCCACTCCTTGCACAAGTGCAATCGGATCTCGACCTTCCCACAGGTTCAATTTCACTACCTTCGGAATCGGAGCGCCGATCACTAAGAGAATTAGGTCTCCGTTTGCAGAGCTGCCTCCCTCGCCTTTCGCGACCTTGATGCCGACGATTTCCGCCATTCTCTCGATAAGCAGAATACAATGA

Protein sequence

MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRSPFAELPPSPFATLMPTISAILSISRIQ
Homology
[Close]
BLAST of CmaCh14G007140 vs. ExPASy TrEMBL
Match: A0A6J1FAF3 (Ste24 endopeptidase OS=Cucurbita moschata OX=3662 GN=LOC111442272 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-13
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASLPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

[Close]
BLAST of CmaCh14G007140 vs. ExPASy TrEMBL
Match: A0A6J1F5C2 (Ste24 endopeptidase OS=Cucurbita moschata OX=3662 GN=LOC111442272 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.6e-13
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASLPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

[Close]
BLAST of CmaCh14G007140 vs. NCBI nr
Match: XP_023527537.1 (uncharacterized protein LOC111790739 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 94.4 bits (233), Expect = 4.5e-16
Identity = 46/47 (97.87%), Postives = 46/47 (97.87%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASFPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 47

[Close]
BLAST of CmaCh14G007140 vs. NCBI nr
Match: XP_022935362.1 (uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata] >XP_022935363.1 uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata] >XP_022935364.1 uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata] >XP_022935365.1 uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata] >XP_022935366.1 uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASLPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

[Close]
BLAST of CmaCh14G007140 vs. NCBI nr
Match: KAG7017826.1 (htpX2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASFPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

[Close]
BLAST of CmaCh14G007140 vs. NCBI nr
Match: XP_022935367.1 (uncharacterized protein LOC111442272 isoform X2 [Cucurbita moschata])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASLPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

[Close]
BLAST of CmaCh14G007140 vs. NCBI nr
Match: KAG6581096.1 (hypothetical protein SDJN03_21098, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.4 bits (202), Expect = 1.8e-12
Identity = 43/47 (91.49%), Postives = 43/47 (91.49%), Query Frame = 0 

Query: 1  MASSPFSSLCLARNSTPCTSAIGSRPSHRFNFTTFGIGAPITKRIRS 48
          MAS PFSSL LARNSTPCT  IGSRPSHRFNFTTFGIGAPITKRIRS
Sbjct: 1  MASFPFSSLYLARNSTPCT--IGSRPSHRFNFTTFGIGAPITKRIRS 45

The following BLAST results are available for this feature:
BLAST of CmaCh14G007140 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh14G007140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FAF38.6e-1391.49Ste24 endopeptidase OS=Cucurbita moschata OX=3662 GN=LOC111442272 PE=3 SV=1[more]
A0A6J1F5C28.6e-1391.49Ste24 endopeptidase OS=Cucurbita moschata OX=3662 GN=LOC111442272 PE=3 SV=1[more]
BLAST of CmaCh14G007140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023527537.14.5e-1697.87uncharacterized protein LOC111790739 [Cucurbita pepo subsp. pepo][more]
XP_022935362.11.8e-1291.49uncharacterized protein LOC111442272 isoform X1 [Cucurbita moschata] >XP_0229353... [more]
KAG7017826.11.8e-1291.49htpX2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022935367.11.8e-1291.49uncharacterized protein LOC111442272 isoform X2 [Cucurbita moschata][more]
KAG6581096.11.8e-1291.49hypothetical protein SDJN03_21098, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh14G007140 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G007140.1CmaCh14G007140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071586 CAAX-box protein processing
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004222 metalloendopeptidase activity