CmaCh14G006090 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G006090
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr14: 3023265 .. 3025319 (+)
RNA-Seq ExpressionCmaCh14G006090
SyntenyCmaCh14G006090
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTATCGCTTCAATCTCACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTCTCTTCCCCCATGTTCTTGTGCCTAAACGAAACTAGAAATAACCTCAAAGTTTGCCTGAGTGAGTTTAAATCAAAGCCCAGAATTCGAATTTCAATTCCCAGAGCTTCATCTTCTTCAACATCCAAAGATATATGGAGAAGAAAAACCCCATCTGAGAAATCAACCACAACCCCATTTCCCCAAAAGTACGAACGCAGTGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTTGATATGGACGAGCTTTTAGCGTCAATTGGACAAACGAAGAACGAGCAAGAGCTTTACTCGATTCTGTCGCCGTACAAAGGGCGGCAGCTTTCAATGCGGTTTATGGTGTCAATTTTGTCGCGAGAATCGGACTGGCAAAGGTCGCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTCTTCGCTTACAATGTTGTTCTACGAAATGTGCTACGTGCTAAACAGTGGGAGCTTGCACATGGGCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACTCTCATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTGAAAAGATCTGGGATTACCCCAGATATTGTAGCCTATAACTCCATGATTAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGAGCTGTGGATGTTGTGCCTGATACTGTTAGCTATTCCACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTCTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTAATCTTACAACTTGTAACATTATGATTGATGTTTATGGTCAACTGGATATGGTGAAGGAAGCTGATCGGCTGTTTTGGAGCATGAGAAAGATGGGAATCGAACCGAATGTTGTGAGTTACAACACCATTCTGAGGGTTTATGGTGAGGCCGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATCGAGCAGAATGTCGTGACATATAACACCATGATCAAGATATATGGGAAGTCCTTGGAGCATGAAAAAGCAACAAATCTCATACAAGAGATGCAAAATAGAGGGATTGAACCAAATGCTATCACATACTCAACAATAATTTCAATATGGGGTAAAGCAGGAAAGTTGGATAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGTGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGCGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGATTCAAGAGTTAAAGCAACCAGACAACATTCCGAGGAAGACAGCGATTACCATTCTTGCTAGAGCTGGTCGAGTCGAAGAAGCCACTTGGGTGTTTCGTCAAGCATTTGATGCGGGCGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATCGACCTGTTTTCAAGGAACAAGAGGCACAAAAATGTGGTGGAGGTGTTTGAGAAGATGAGAAGTGTGGGACATTTCCCAAGCTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGACTTTGACAAGGCCGATGCTGTATATATGGAGATGCAAGAACAGGGCTGTGTTTTTCCAGACGAAGTGCACTTCCAGATGCTCAGTCTCTATGGTGCAAGAAAGGATTACAAGAGATTGGAGGAGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAACTGCATCTCGTCGTTGCGGGTATCTACGAAAGAGCTAATAGACTTAACGATGCATCTCGGATTATGAACAGGATGAATGAAATGTCCATTTCAAGATCATGA

mRNA sequence

ATGGTTATCGCTTCAATCTCACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTCTCTTCCCCCATGTTCTTGTGCCTAAACGAAACTAGAAATAACCTCAAAGTTTGCCTGAGTGAGTTTAAATCAAAGCCCAGAATTCGAATTTCAATTCCCAGAGCTTCATCTTCTTCAACATCCAAAGATATATGGAGAAGAAAAACCCCATCTGAGAAATCAACCACAACCCCATTTCCCCAAAAGTACGAACGCAGTGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTTGATATGGACGAGCTTTTAGCGTCAATTGGACAAACGAAGAACGAGCAAGAGCTTTACTCGATTCTGTCGCCGTACAAAGGGCGGCAGCTTTCAATGCGGTTTATGGTGTCAATTTTGTCGCGAGAATCGGACTGGCAAAGGTCGCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTCTTCGCTTACAATGTTGTTCTACGAAATGTGCTACGTGCTAAACAGTGGGAGCTTGCACATGGGCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACTCTCATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTGAAAAGATCTGGGATTACCCCAGATATTGTAGCCTATAACTCCATGATTAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGAGCTGTGGATGTTGTGCCTGATACTGTTAGCTATTCCACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTCTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTAATCTTACAACTTGTAACATTATGATTGATGTTTATGGTCAACTGGATATGGTGAAGGAAGCTGATCGGCTGTTTTGGAGCATGAGAAAGATGGGAATCGAACCGAATGTTGTGAGTTACAACACCATTCTGAGGGTTTATGGTGAGGCCGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATCGAGCAGAATGTCGTGACATATAACACCATGATCAAGATATATGGGAAGTCCTTGGAGCATGAAAAAGCAACAAATCTCATACAAGAGATGCAAAATAGAGGGATTGAACCAAATGCTATCACATACTCAACAATAATTTCAATATGGGGTAAAGCAGGAAAGTTGGATAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGTGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGCGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGATTCAAGAGTTAAAGCAACCAGACAACATTCCGAGGAAGACAGCGATTACCATTCTTGCTAGAGCTGGTCGAGTCGAAGAAGCCACTTGGGTGTTTCGTCAAGCATTTGATGCGGGCGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATCGACCTGTTTTCAAGGAACAAGAGGCACAAAAATGTGGTGGAGGTGTTTGAGAAGATGAGAAGTGTGGGACATTTCCCAAGCTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGACTTTGACAAGGCCGATGCTGTATATATGGAGATGCAAGAACAGGGCTGTGTTTTTCCAGACGAAGTGCACTTCCAGATGCTCAGTCTCTATGGTGCAAGAAAGGATTACAAGAGATTGGAGGAGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAACTGCATCTCGTCGTTGCGGGTATCTACGAAAGAGCTAATAGACTTAACGATGCATCTCGGATTATGAACAGGATGAATGAAATGTCCATTTCAAGATCATGA

Coding sequence (CDS)

ATGGTTATCGCTTCAATCTCACCTTCTTCAATGCAATTGCAATCAACTTCATCCTTCTCTTCCCCCATGTTCTTGTGCCTAAACGAAACTAGAAATAACCTCAAAGTTTGCCTGAGTGAGTTTAAATCAAAGCCCAGAATTCGAATTTCAATTCCCAGAGCTTCATCTTCTTCAACATCCAAAGATATATGGAGAAGAAAAACCCCATCTGAGAAATCAACCACAACCCCATTTCCCCAAAAGTACGAACGCAGTGCGAGAAGGCAAAGAGAGTCCTCACATTTAGACCACAGCGTTGATATGGACGAGCTTTTAGCGTCAATTGGACAAACGAAGAACGAGCAAGAGCTTTACTCGATTCTGTCGCCGTACAAAGGGCGGCAGCTTTCAATGCGGTTTATGGTGTCAATTTTGTCGCGAGAATCGGACTGGCAAAGGTCGCTTGCGATTCTCGATTGGATCAACGAAGAGGCTCTTTACACTCCTTCGGTCTTCGCTTACAATGTTGTTCTACGAAATGTGCTACGTGCTAAACAGTGGGAGCTTGCACATGGGCTGTTCGACGAAATGCGCCAGAGAGCTCTTGCGGCTGATAGGTATACTTATTCGACTCTCATCACTTATTTTGGCAAAGAGGGTATGTTTGATGCTGCCCTCTCTTGGCTACAAAAAATGGAGCAAGATCGTGTGTCTGGGGACCTTGTTTTGTACAGTAATTTGATTGAGCTTTCTCGTAAACTCTGTGATTATTCAAAGGCTATTTCTATTTTTTCGAGATTGAAAAGATCTGGGATTACCCCAGATATTGTAGCCTATAACTCCATGATTAATGTGTTTGGAAAAGCTAAGCTTTTTAGAGAGGCTCGTTTTTTGTTGAAAGAGATGAGAGCTGTGGATGTTGTGCCTGATACTGTTAGCTATTCCACTTTGCTGAGTATGTTTGTTGAGAATGAGAAGTTCTTGGAGGCACTCTCTGTGTTTTCTGAGATGACAGAGGTCAACTGCCCGCTTAATCTTACAACTTGTAACATTATGATTGATGTTTATGGTCAACTGGATATGGTGAAGGAAGCTGATCGGCTGTTTTGGAGCATGAGAAAGATGGGAATCGAACCGAATGTTGTGAGTTACAACACCATTCTGAGGGTTTATGGTGAGGCCGAGCTTTTCGGGGAAGCGATACACCTTTTCCGGTTGATGCAGAGGAAGGAGATCGAGCAGAATGTCGTGACATATAACACCATGATCAAGATATATGGGAAGTCCTTGGAGCATGAAAAAGCAACAAATCTCATACAAGAGATGCAAAATAGAGGGATTGAACCAAATGCTATCACATACTCAACAATAATTTCAATATGGGGTAAAGCAGGAAAGTTGGATAGAGCTGCAATGCTATTTCAGAAGCTGAGAAGCTCTGGTGCTGAGATTGATCAGGTCCTTTACCAGACTATGATTGTGGCCTATGAGCGGGCAGGCTTGGTTGCTCATGCCAAGCGTTTGATTCAAGAGTTAAAGCAACCAGACAACATTCCGAGGAAGACAGCGATTACCATTCTTGCTAGAGCTGGTCGAGTCGAAGAAGCCACTTGGGTGTTTCGTCAAGCATTTGATGCGGGCGAGTTAAAGGATATATCTGTTTTTGGGTGCATGATCGACCTGTTTTCAAGGAACAAGAGGCACAAAAATGTGGTGGAGGTGTTTGAGAAGATGAGAAGTGTGGGACATTTCCCAAGCTCTAATGTCATTGCCCTTGTCCTAAACGCTTATGGGAAGCTGAGGGACTTTGACAAGGCCGATGCTGTATATATGGAGATGCAAGAACAGGGCTGTGTTTTTCCAGACGAAGTGCACTTCCAGATGCTCAGTCTCTATGGTGCAAGAAAGGATTACAAGAGATTGGAGGAGTTGTTCGAAAGGCTCGACTCCGATCCCAATATCAATAAGAAGGAACTGCATCTCGTCGTTGCGGGTATCTACGAAAGAGCTAATAGACTTAACGATGCATCTCGGATTATGAACAGGATGAATGAAATGTCCATTTCAAGATCATGA

Protein sequence

MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLNDASRIMNRMNEMSISRS
Homology
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BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match: Q9FLD8 (Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g39980 PE=2 SV=1)

HSP 1 Score: 1010.7 bits (2612), Expect = 7.6e-294
Identity = 516/678 (76.11%), Postives = 598/678 (88.20%), Query Frame = 0 

Query: 11  MQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIR-------ISIPRASSSSTSKDI 70
           +++ S+SS S P+   L  TR ++   +  F + P  R       +S   +S S+ +K +
Sbjct: 3   IEIASSSSLSLPL---LPLTRPHIYTSI-PFSTIPEARQRNLIFTVSASSSSESTQNKKV 62

Query: 71  WRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSP 130
           WR++   EK+TT+ F  +  R  RR + S+ LDH+VDMDELLASI QT+NE+EL+S+LS 
Sbjct: 63  WRKQ--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLST 122

Query: 131 YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELA 190
           YK RQLS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++A
Sbjct: 123 YKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIA 182

Query: 191 HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIEL 250
           HGLFDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIEL
Sbjct: 183 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 242

Query: 251 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD 310
           SR+LCDYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+
Sbjct: 243 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 302

Query: 311 TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFW 370
           TVSYSTLLS++VEN KFLEALSVF+EM EVNC L+LTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 303 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 362

Query: 371 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 430
           S+RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++
Sbjct: 363 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 422

Query: 431 EHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQ 490
           EHEKATNL+QEMQ+RGIEPNAITYSTIISIWGKAGKLDRAA LFQKLRSSG EIDQVLYQ
Sbjct: 423 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 482

Query: 491 TMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELK 550
           TMIVAYER GL+ HAKRL+ ELK PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+K
Sbjct: 483 TMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK 542

Query: 551 DISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVY 610
           DISVFGCMI+L+SRN+R+ NV+EVFEKMR+ G+FP SNVIA+VLNAYGK R+F+KAD VY
Sbjct: 543 DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 602

Query: 611 MEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERA 670
            EMQE+GCVFPDEVHFQMLSLY ++KD++ +E LF+RL+SDPN+N KELHLVVA +YERA
Sbjct: 603 REMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERA 662

Query: 671 NRLNDASRIMNRMNEMSI 682
           ++LNDASR+MNRM E  I
Sbjct: 663 DKLNDASRVMNRMRERGI 672

[Close]
BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 1.7e-51
Identity = 135/454 (29.74%), Postives = 238/454 (52.42%), Query Frame = 0 

Query: 160 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 219
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 220 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 279
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 280 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 339
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 340 LNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 399
            ++ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 400 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGK 459
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 460 AGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELK----QPDNIP 519
            GKL++A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 520 RKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVFEKMR 579
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 580 SVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEM 607
           S G    ++ I++V+N    L D  + +  Y+EM
Sbjct: 601 SCGFVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]
BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match: Q9S7Q2 (Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PTAC2 PE=2 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.4e-50
Identity = 129/590 (21.86%), Postives = 274/590 (46.44%), Query Frame = 0 

Query: 97  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 156
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 157 INEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 216
           +  +    P+   Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 217 MFDAALSWLQKMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 276
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 277 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 336
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 337 VNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 396
                ++T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 397 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIIS 456
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 457 IWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELKQPDNIP 516
             GK G  + A  + Q + ++        Y  +I A+ +A L   A      + +  + P
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 517 R----KTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVF 576
                 + +   AR G V+E+  +  +  D+G  ++   F   I+ + +  + +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 577 EKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQGCVFPDEVHFQMLSLYGAR 636
             M      P    +  VL+ Y   R  D+    + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 637 KDYKRLEELFERLDSDPNIN-KKELHLVVAGIYERANRLNDASRIMNRMN 678
           + +  + EL E + S+   N  + +  ++ G Y+  +       +++++N
Sbjct: 612 ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLN 660

[Close]
BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match: Q9LQ16 (Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX=3702 GN=At1g62910 PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 6.0e-49
Identity = 127/446 (28.48%), Postives = 229/446 (51.35%), Query Frame = 0 

Query: 147 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 206
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 207 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 266
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 267 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 326
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 327 FSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 386
           + EM + +   ++ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 387 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAIT 446
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 447 YSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELK 506
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 507 ----QPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHK 566
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 567 NVVEVFEKMRSVGHFPSSNVIALVLN 589
              E+ ++MRS G    ++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match: Q9LYZ9 (Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX=3702 GN=At5g02860 PE=2 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.8e-49
Identity = 134/520 (25.77%), Postives = 257/520 (49.42%), Query Frame = 0 

Query: 178 KQWELAHGLFD-EMRQRALAA--DRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 237
           K+++LA   FD  M+Q+   +  D    + +I+  GKEG   +A +    +++D  S D+
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDV 208

Query: 238 VLYSNLIELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGK-AKLFREARFLLK 297
             Y++LI        Y +A+++F +++  G  P ++ YN ++NVFGK    + +   L++
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268

Query: 298 EMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLD 357
           +M++  + PD  +Y+TL++         EA  VF EM       +  T N ++DVYG+  
Sbjct: 269 KMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSH 328

Query: 358 MVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYN 417
             KEA ++   M   G  P++V+YN+++  Y    +  EA+ L   M  K  + +V TY 
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388

Query: 418 TMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSS 477
           T++  + ++ + E A ++ +EM+N G +PN  T++  I ++G  GK      +F ++   
Sbjct: 389 TLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVC 448

Query: 478 GAEIDQVLYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRK----TAITILARAGRVEEA 537
           G   D V + T++  + + G+ +    + +E+K+   +P +    T I+  +R G  E+A
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQA 508

Query: 538 TWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNA 597
             V+R+  DAG   D+S +  ++   +R    +   +V  +M      P+      +L+A
Sbjct: 509 MTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568

Query: 598 YGKLRDFDKADAVYMEMQEQGCVFPDEVHFQMLSLYGARKDY-----KRLEELFERLDSD 657
           Y   ++     ++  E+   G + P  V  + L L  ++ D      +   EL ER    
Sbjct: 569 YANGKEIGLMHSLAEEVY-SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKER-GFS 628

Query: 658 PNINKKELHLVVAGIYERANRLNDASRIMNRMNEMSISRS 685
           P+I    L+ +V+ IY R   +  A+ +++ M E   + S
Sbjct: 629 PDIT--TLNSMVS-IYGRRQMVAKANGVLDYMKERGFTPS 663

[Close]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match: A0A6J1J8J4 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111482255 PE=4 SV=1)

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS
Sbjct: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY
Sbjct: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match: A0A6J1F2M9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111441589 PE=4 SV=1)

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 676/684 (98.83%), Postives = 681/684 (99.56%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           MV+ASISPSSMQLQSTSSFSSP+FLCL ETRNNLKVCLSEFKSKPRIRISIPRASSSSTS
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDIWRRKT SEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTSSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNK+HKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVYMEMQE+GCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVA IY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match: A0A5A7UGV7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G008300 PE=4 SV=1)

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 626/676 (92.60%), Postives = 653/676 (96.60%), Query Frame = 0 

Query: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68
           SS+QLQST SFSSP+ L L ETR+  K+  ++ K+KPR RI I RASSSS SKDIWRRKT
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128
           PSEKSTTT  PQKY+RSARRQRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368
           TLL+MFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548
           YE+AGLVAHAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608
           GCMIDLFSRNK+HKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLND 668
           +GC+FPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 669 ASRIMNRMNEMSISRS 685
           ASRIMNRMNE +ISRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match: A0A1S3B8T9 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487030 PE=4 SV=1)

HSP 1 Score: 1223.4 bits (3164), Expect = 0.0e+00
Identity = 626/676 (92.60%), Postives = 653/676 (96.60%), Query Frame = 0 

Query: 9   SSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKT 68
           SS+QLQST SFSSP+ L L ETR+  K+  ++ K+KPR RI I RASSSS SKDIWRRKT
Sbjct: 4   SSIQLQSTLSFSSPIPLFLIETRDYPKIRFNKIKTKPRTRIPIFRASSSSASKDIWRRKT 63

Query: 69  PSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQ 128
           PSEKSTTT  PQKY+RSARRQRESSHLDHS+DMDELLASIGQTKNEQELYS+LSPYKGRQ
Sbjct: 64  PSEKSTTTLLPQKYQRSARRQRESSHLDHSIDMDELLASIGQTKNEQELYSVLSPYKGRQ 123

Query: 129 LSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFD 188
           LSMRFMVS+LSRESDWQRSLAILDWINEEALYTPSV+AYNVVLRNVLRAKQWELAHGLFD
Sbjct: 124 LSMRFMVSLLSRESDWQRSLAILDWINEEALYTPSVYAYNVVLRNVLRAKQWELAHGLFD 183

Query: 189 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 248
           EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC
Sbjct: 184 EMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLC 243

Query: 249 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYS 308
           DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV+PDTVSYS
Sbjct: 244 DYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVMPDTVSYS 303

Query: 309 TLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKM 368
           TLL+MFVENEKFLEALSVFSEMTEVNCPL+LTTCNIMIDVYGQLDMVKEADRLFW MRKM
Sbjct: 304 TLLNMFVENEKFLEALSVFSEMTEVNCPLDLTTCNIMIDVYGQLDMVKEADRLFWRMRKM 363

Query: 369 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 428
           GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA
Sbjct: 364 GIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKA 423

Query: 429 TNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVA 488
           TNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSS AEIDQVLYQTMIVA
Sbjct: 424 TNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSRAEIDQVLYQTMIVA 483

Query: 489 YERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVF 548
           YE+AGLVAHAKRL+ ELKQPDNIPRKTAITILA+AGR+EEATWVFRQAFDAGELKDISVF
Sbjct: 484 YEKAGLVAHAKRLLHELKQPDNIPRKTAITILAKAGRIEEATWVFRQAFDAGELKDISVF 543

Query: 549 GCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE 608
           GCMIDLFSRNK+HKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFD ADAVYMEMQE
Sbjct: 544 GCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDTADAVYMEMQE 603

Query: 609 QGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLND 668
           +GC+FPDEVHFQMLSLYGARKDYKRLE LFERLDSDPNINKKELHLVVA IYER NRLN+
Sbjct: 604 KGCIFPDEVHFQMLSLYGARKDYKRLESLFERLDSDPNINKKELHLVVASIYERGNRLNN 663

Query: 669 ASRIMNRMNEMSISRS 685
           ASRIMNRMNE +ISRS
Sbjct: 664 ASRIMNRMNETAISRS 679

[Close]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match: A0A6J1DYU7 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111024318 PE=4 SV=1)

HSP 1 Score: 1200.7 bits (3105), Expect = 0.0e+00
Identity = 613/681 (90.01%), Postives = 648/681 (95.15%), Query Frame = 0 

Query: 4   ASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDI 63
           +SIS SSMQL+STS FSS + L L  TRN+  + L++ K KP   I I RAS+SS SKD+
Sbjct: 4   SSISSSSMQLESTSPFSSAIPLFLLGTRNHAPIRLNKIKRKPTTPIIILRASASSKSKDV 63

Query: 64  WRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSP 123
           WRR+TPS  ST +PFPQKY+RSARRQRE  HLDHSVDMDELL+SIGQTKNEQELYS+LSP
Sbjct: 64  WRRRTPSGDSTASPFPQKYQRSARRQREPPHLDHSVDMDELLSSIGQTKNEQELYSVLSP 123

Query: 124 YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELA 183
           YKGRQLS+RFMVS+LSRE DWQRSLAILDW+NEEALYTPSVFAYNVV+RNVLRAKQWE+A
Sbjct: 124 YKGRQLSIRFMVSLLSREPDWQRSLAILDWVNEEALYTPSVFAYNVVIRNVLRAKQWEIA 183

Query: 184 HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIEL 243
           HGLFDEMRQRALAADRYTYSTLIT FGKEG+FDAAL WLQ+MEQDRVSGDLVLYSNLIEL
Sbjct: 184 HGLFDEMRQRALAADRYTYSTLITCFGKEGLFDAALYWLQQMEQDRVSGDLVLYSNLIEL 243

Query: 244 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD 303
           SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAV VVPD
Sbjct: 244 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVGVVPD 303

Query: 304 TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFW 363
           TVSYSTLLSMFVENEKFLEALSV+SEM EVNCPL+LTTCN+MIDVYGQLDMVKEADRLFW
Sbjct: 304 TVSYSTLLSMFVENEKFLEALSVYSEMMEVNCPLDLTTCNVMIDVYGQLDMVKEADRLFW 363

Query: 364 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 423
           SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL
Sbjct: 364 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 423

Query: 424 EHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQ 483
           EHEKATNL+QEMQNRGIEPNAITYSTIISIWGKAGKL+RAAMLFQKLRSSGAEIDQVLYQ
Sbjct: 424 EHEKATNLVQEMQNRGIEPNAITYSTIISIWGKAGKLERAAMLFQKLRSSGAEIDQVLYQ 483

Query: 484 TMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELK 543
           TMIVAYERAGLVAHAKRL+ ELKQPDNIPRKTAITILARAGR+EEATWVFRQAFDAGELK
Sbjct: 484 TMIVAYERAGLVAHAKRLLHELKQPDNIPRKTAITILARAGRIEEATWVFRQAFDAGELK 543

Query: 544 DISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVY 603
           DIS+FGCMIDLFSRNK+HKNVVEVFEKMRSVGHFP+SNVIALVLNAYGKLRDFDKADAVY
Sbjct: 544 DISIFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPNSNVIALVLNAYGKLRDFDKADAVY 603

Query: 604 MEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERA 663
           MEMQE+GCVF DEVHFQML LYGARKDYKRL+ LFERLDSDPNINKKELHLVVA IYERA
Sbjct: 604 MEMQEEGCVFSDEVHFQMLGLYGARKDYKRLDSLFERLDSDPNINKKELHLVVASIYERA 663

Query: 664 NRLNDASRIMNRMNEMSISRS 685
           NRLNDASRIM+RMNEM+ISRS
Sbjct: 664 NRLNDASRIMSRMNEMAISRS 684

[Close]
BLAST of CmaCh14G006090 vs. NCBI nr
Match: XP_022983728.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita maxima])

HSP 1 Score: 1327.8 bits (3435), Expect = 0.0e+00
Identity = 684/684 (100.00%), Postives = 684/684 (100.00%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS
Sbjct: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY
Sbjct: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of CmaCh14G006090 vs. NCBI nr
Match: XP_022934402.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita moschata])

HSP 1 Score: 1313.5 bits (3398), Expect = 0.0e+00
Identity = 676/684 (98.83%), Postives = 681/684 (99.56%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           MV+ASISPSSMQLQSTSSFSSP+FLCL ETRNNLKVCLSEFKSKPRIRISIPRASSSSTS
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDIWRRKT SEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTSSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKM+QDRVSGDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMDQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNK+HKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVYMEMQE+GCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVA IY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of CmaCh14G006090 vs. NCBI nr
Match: KAG6580983.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1310.0 bits (3389), Expect = 0.0e+00
Identity = 674/684 (98.54%), Postives = 679/684 (99.27%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           MV+ASISPSSMQLQSTSSFSSP+FLCL ETRNNLKVCLSEFKSKPRIRISIPRASSSSTS
Sbjct: 1   MVVASISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KDIWRRKTPSEKST TPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 61  KDIWRRKTPSEKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL
Sbjct: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEE+TWVFRQAFDAG
Sbjct: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAG 540

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNK+HKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 541 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVYMEMQE+GCVFPDEVHFQMLSLY ARKDYKRLEE FERLDSDPNINKKELHLVVA IY
Sbjct: 601 AVYMEMQEEGCVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIY 660

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 661 ERANRLNDASRIMNRMNEMSISRS 684

[Close]
BLAST of CmaCh14G006090 vs. NCBI nr
Match: XP_023521621.1 (pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023527980.1 pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1309.7 bits (3388), Expect = 0.0e+00
Identity = 672/684 (98.25%), Postives = 680/684 (99.42%), Query Frame = 0 

Query: 1   MVIASISPSSMQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTS 60
           ++I+ ISPSSMQLQSTSSFSSP+FLCL ETRNNLKVCLSEFKSKPRIRIS+PRASSSSTS
Sbjct: 2   VIISLISPSSMQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISVPRASSSSTS 61

Query: 61  KDIWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 120
           KD+WRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI
Sbjct: 62  KDVWRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSI 121

Query: 121 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 180
           LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW
Sbjct: 122 LSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQW 181

Query: 181 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 240
           ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL
Sbjct: 182 ELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNL 241

Query: 241 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 300
           IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV
Sbjct: 242 IELSRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDV 301

Query: 301 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 360
           VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR
Sbjct: 302 VPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADR 361

Query: 361 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 420
           LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG
Sbjct: 362 LFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYG 421

Query: 421 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 480
           KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV
Sbjct: 422 KSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQV 481

Query: 481 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 540
           LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG
Sbjct: 482 LYQTMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAG 541

Query: 541 ELKDISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 600
           ELKDISVFGCMIDLFSRNK+HKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD
Sbjct: 542 ELKDISVFGCMIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKAD 601

Query: 601 AVYMEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIY 660
           AVY EMQE+GCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVA IY
Sbjct: 602 AVYTEMQEEGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVASIY 661

Query: 661 ERANRLNDASRIMNRMNEMSISRS 685
           ERANRLNDASRIMNRMNEMSISRS
Sbjct: 662 ERANRLNDASRIMNRMNEMSISRS 685

[Close]
BLAST of CmaCh14G006090 vs. NCBI nr
Match: KAG7017725.1 (Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 665/674 (98.66%), Postives = 669/674 (99.26%), Query Frame = 0 

Query: 11  MQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS 70
           MQLQSTSSFSSP+FLCL ETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS
Sbjct: 1   MQLQSTSSFSSPVFLCLIETRNNLKVCLSEFKSKPRIRISIPRASSSSTSKDIWRRKTPS 60

Query: 71  EKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 130
           EKST TPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS
Sbjct: 61  EKSTATPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSPYKGRQLS 120

Query: 131 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 190
           MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM
Sbjct: 121 MRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEM 180

Query: 191 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 250
           RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY
Sbjct: 181 RQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDY 240

Query: 251 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 310
           SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL
Sbjct: 241 SKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTL 300

Query: 311 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 370
           LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI
Sbjct: 301 LSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGI 360

Query: 371 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 430
           EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN
Sbjct: 361 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATN 420

Query: 431 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 490
           LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE
Sbjct: 421 LIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYE 480

Query: 491 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGC 550
           RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEE+TWVFRQAFDAGELKDISVFGC
Sbjct: 481 RAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEESTWVFRQAFDAGELKDISVFGC 540

Query: 551 MIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQG 610
           MIDLFSRNK+HKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQE+G
Sbjct: 541 MIDLFSRNKKHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEEG 600

Query: 611 CVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLNDAS 670
           CVFPDEVHFQMLSLY ARKDYKRLEE FERLDSDPNINKKELHLVVA IYERANRLNDAS
Sbjct: 601 CVFPDEVHFQMLSLYSARKDYKRLEESFERLDSDPNINKKELHLVVASIYERANRLNDAS 660

Query: 671 RIMNRMNEMSISRS 685
           RIMNRMNEMSISRS
Sbjct: 661 RIMNRMNEMSISRS 674

[Close]
BLAST of CmaCh14G006090 vs. TAIR 10
Match: AT5G39980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 1010.7 bits (2612), Expect = 5.4e-295
Identity = 516/678 (76.11%), Postives = 598/678 (88.20%), Query Frame = 0 

Query: 11  MQLQSTSSFSSPMFLCLNETRNNLKVCLSEFKSKPRIR-------ISIPRASSSSTSKDI 70
           +++ S+SS S P+   L  TR ++   +  F + P  R       +S   +S S+ +K +
Sbjct: 3   IEIASSSSLSLPL---LPLTRPHIYTSI-PFSTIPEARQRNLIFTVSASSSSESTQNKKV 62

Query: 71  WRRKTPSEKSTTTPFPQKYERSARRQRESSHLDHSVDMDELLASIGQTKNEQELYSILSP 130
           WR++   EK+TT+ F  +  R  RR + S+ LDH+VDMDELLASI QT+NE+EL+S+LS 
Sbjct: 63  WRKQ--PEKNTTSSF--QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLST 122

Query: 131 YKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELA 190
           YK RQLS+RFMVS+LSRE+DWQRSLA+LDW++EEA YTPSVFAYNVVLRNVLRAKQ+++A
Sbjct: 123 YKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIA 182

Query: 191 HGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIEL 250
           HGLFDEMRQRALA DRYTYSTLIT FGKEGMFD+ALSWLQKMEQDRVSGDLVLYSNLIEL
Sbjct: 183 HGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIEL 242

Query: 251 SRKLCDYSKAISIFSRLKRSGITPDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPD 310
           SR+LCDYSKAISIFSRLKRSGITPD+VAYNSMINV+GKAKLFREAR L+KEM    V+P+
Sbjct: 243 SRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPN 302

Query: 311 TVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFW 370
           TVSYSTLLS++VEN KFLEALSVF+EM EVNC L+LTTCNIMIDVYGQLDMVKEADRLFW
Sbjct: 303 TVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFW 362

Query: 371 SMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSL 430
           S+RKM IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK+IEQNVVTYNTMIKIYGK++
Sbjct: 363 SLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTM 422

Query: 431 EHEKATNLIQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQ 490
           EHEKATNL+QEMQ+RGIEPNAITYSTIISIWGKAGKLDRAA LFQKLRSSG EIDQVLYQ
Sbjct: 423 EHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQ 482

Query: 491 TMIVAYERAGLVAHAKRLIQELKQPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELK 550
           TMIVAYER GL+ HAKRL+ ELK PDNIPR+TAITILA+AGR EEATWVFRQAF++GE+K
Sbjct: 483 TMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK 542

Query: 551 DISVFGCMIDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVY 610
           DISVFGCMI+L+SRN+R+ NV+EVFEKMR+ G+FP SNVIA+VLNAYGK R+F+KAD VY
Sbjct: 543 DISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVY 602

Query: 611 MEMQEQGCVFPDEVHFQMLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERA 670
            EMQE+GCVFPDEVHFQMLSLY ++KD++ +E LF+RL+SDPN+N KELHLVVA +YERA
Sbjct: 603 REMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLESDPNVNSKELHLVVAALYERA 662

Query: 671 NRLNDASRIMNRMNEMSI 682
           ++LNDASR+MNRM E  I
Sbjct: 663 DKLNDASRVMNRMRERGI 672

[Close]
BLAST of CmaCh14G006090 vs. TAIR 10
Match: AT1G62930.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-52
Identity = 135/454 (29.74%), Postives = 238/454 (52.42%), Query Frame = 0 

Query: 160 YTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAAL 219
           Y P+   +N ++  +    +   A  L D M  R    D +TY T++    K G  D AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 220 SWLQKMEQDRVSGDLVLYSNLIELSRKLCDY---SKAISIFSRLKRSGITPDIVAYNSMI 279
           S L+KME+ ++  D+V+Y+ +I+    LC+Y   + A+++F+ +   GI P++V YNS+I
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIID---ALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 300

Query: 280 NVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCP 339
                   + +A  LL +M    + P+ V++S L+  FV+  K +EA  ++ EM + +  
Sbjct: 301 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360

Query: 340 LNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHL 399
            ++ T + +I+ +   D + EA  +F  M      PNVV+YNT+++ + +A+   E + L
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 420

Query: 400 FRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIISIWGK 459
           FR M ++ +  N VTYNT+I+   ++ + + A  + ++M + G+ P+ ITYS ++    K
Sbjct: 421 FREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 480

Query: 460 AGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELK----QPDNIP 519
            GKL++A ++F+ L+ S  E D   Y  MI    +AG V     L   L     +P+ I 
Sbjct: 481 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVII 540

Query: 520 RKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVFEKMR 579
             T I+   R G  EEA  +FR+  + G L +   +  +I    R+       E+ ++MR
Sbjct: 541 YTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMR 600

Query: 580 SVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEM 607
           S G    ++ I++V+N    L D  + +  Y+EM
Sbjct: 601 SCGFVGDASTISMVIN---MLHD-GRLEKSYLEM 627

[Close]
BLAST of CmaCh14G006090 vs. TAIR 10
Match: AT1G74850.1 (plastid transcriptionally active 2 )

HSP 1 Score: 201.8 bits (512), Expect = 1.7e-51
Identity = 129/590 (21.86%), Postives = 274/590 (46.44%), Query Frame = 0 

Query: 97  HSVDMDELLASIGQTKNEQELYSILSPYKGRQLSMRFMVSILSR---ESDWQRSLAILDW 156
           +S D++ L+  +        +   L  +K + LS+     +        DWQRSL +  +
Sbjct: 72  YSYDVESLINKLSSLPPRGSIARCLDIFKNK-LSLNDFALVFKEFAGRGDWQRSLRLFKY 131

Query: 157 INEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEG 216
           +  +    P+   Y +++  + R    +    +FDEM  + ++   ++Y+ LI  +G+ G
Sbjct: 132 MQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNG 191

Query: 217 MFDAALSWLQKMEQDRVSGDLVLYSNLIE-LSRKLCDYSKAISIFSRLKRSGITPDIVAY 276
            ++ +L  L +M+ +++S  ++ Y+ +I   +R   D+   + +F+ ++  GI PDIV Y
Sbjct: 192 RYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTY 251

Query: 277 NSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTE 336
           N++++      L  EA  + + M    +VPD  +YS L+  F +  +  +   +  EM  
Sbjct: 252 NTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMAS 311

Query: 337 VNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGE 396
                ++T+ N++++ Y +   +KEA  +F  M+  G  PN  +Y+ +L ++G++  + +
Sbjct: 312 GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDD 371

Query: 397 AIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAITYSTIIS 456
              LF  M+    + +  TYN +I+++G+    ++   L  +M    IEP+  TY  II 
Sbjct: 372 VRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIF 431

Query: 457 IWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELKQPDNIP 516
             GK G  + A  + Q + ++        Y  +I A+ +A L   A      + +  + P
Sbjct: 432 ACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNP 491

Query: 517 R----KTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHKNVVEVF 576
                 + +   AR G V+E+  +  +  D+G  ++   F   I+ + +  + +  V+ +
Sbjct: 492 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 551

Query: 577 EKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQGCVFPDEVHFQMLSLYGAR 636
             M      P    +  VL+ Y   R  D+    + EM+    +     +  ML++YG  
Sbjct: 552 VDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKT 611

Query: 637 KDYKRLEELFERLDSDPNIN-KKELHLVVAGIYERANRLNDASRIMNRMN 678
           + +  + EL E + S+   N  + +  ++ G Y+  +       +++++N
Sbjct: 612 ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLN 660

[Close]
BLAST of CmaCh14G006090 vs. TAIR 10
Match: AT1G62910.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 4.3e-50
Identity = 127/446 (28.48%), Postives = 229/446 (51.35%), Query Frame = 0 

Query: 147 SLAILDWINEEALYTPSVFAYNVVLRNVLRAKQWELAHGLFDEMRQRALAADRYTYSTLI 206
           ++A++D + E   Y P  F +  ++  +    +   A  L D+M QR    D  TY T++
Sbjct: 172 AVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVV 231

Query: 207 TYFGKEGMFDAALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGIT 266
               K G  D ALS L+KME+ ++  D+V+Y+ +I+   K      A+++F+ +   GI 
Sbjct: 232 NGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIR 291

Query: 267 PDIVAYNSMINVFGKAKLFREARFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSV 326
           PD+  Y+S+I+       + +A  LL +M    + P+ V++S L+  FV+  K +EA  +
Sbjct: 292 PDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 351

Query: 327 FSEMTEVNCPLNLTTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGE 386
           + EM + +   ++ T + +I+ +   D + EA  +F  M      PNVV+Y+T+++ + +
Sbjct: 352 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 411

Query: 387 AELFGEAIHLFRLMQRKEIEQNVVTYNTMIKIYGKSLEHEKATNLIQEMQNRGIEPNAIT 446
           A+   E + LFR M ++ +  N VTY T+I  + ++ + + A  + ++M + G+ PN +T
Sbjct: 412 AKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 471

Query: 447 YSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLVAHAKRLIQELK 506
           Y+ ++    K GKL +A ++F+ L+ S  E D   Y  MI    +AG V     L   L 
Sbjct: 472 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLS 531

Query: 507 ----QPDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCMIDLFSRNKRHK 566
                P+ I   T I+   R G  EEA  + ++  + G L +   +  +I    R+   +
Sbjct: 532 LKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDRE 591

Query: 567 NVVEVFEKMRSVGHFPSSNVIALVLN 589
              E+ ++MRS G    ++ I LV N
Sbjct: 592 ASAELIKEMRSCGFAGDASTIGLVTN 616

[Close]
BLAST of CmaCh14G006090 vs. TAIR 10
Match: AT3G23020.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 197.2 bits (500), Expect = 4.3e-50
Identity = 145/614 (23.62%), Postives = 285/614 (46.42%), Query Frame = 0 

Query: 115 QELYSILSPYKGRQLSMRFMVSILSRESDWQRSLAILDWINEEALYTPSVFAYNVVLRNV 174
           +++   LSP+  R LS +    IL  +  W+R++ I +W   +  Y  +V  YN++LR +
Sbjct: 139 EDVEDALSPWAER-LSNKERTIILKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRIL 198

Query: 175 LRAKQWELAHGLFDEMRQRALAADRYTYSTLITYFGKEGMFDAALSWLQKMEQDRVSGDL 234
            +A +W     L+DEM ++ +     TY TLI  + K G+   AL WL KM +  +  D 
Sbjct: 199 GKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDE 258

Query: 235 VLYSNLIELSRKLCDYSKAISIFSRLK------RSGITPDIVAYNSMINVFGKAKLFREA 294
           V    ++++ +K  ++ KA   F +         S +      YN+MI+ +GK+   +EA
Sbjct: 259 VTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEA 318

Query: 295 RFLLKEMRAVDVVPDTVSYSTLLSMFVENEKFLEALSVFSEMTEVNCPLNLTTCNIMIDV 354
               K M    +VP TV+++T++ ++  N +  E  S+   M +++C  +  T NI+I +
Sbjct: 319 SETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISL 378

Query: 355 YGQLDMVKEADRLFWSMRKMGIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKEIEQN 414
           + + + ++ A   F  M+  G++P+ VSY T+L  +    +  EA  L   M    +E +
Sbjct: 379 HTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEID 438

Query: 415 VVTYNTMIKIY------GKSLEHEKATNLIQEMQNRGIEPN------------------- 474
             T + + ++Y       KS    K  ++   M + G   N                   
Sbjct: 439 EYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFIC 498

Query: 475 --------AITYSTIISIWGKAGKLDRAAMLFQKLRSSGAEIDQVLYQTMIVAYERAGLV 534
                    I Y+ +I  +G +   ++A  LF+ + S G   D+  Y T++     A + 
Sbjct: 499 CQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMP 558

Query: 535 AHAKRLIQELKQ----PDNIPRKTAITILARAGRVEEATWVFRQAFDAGELKDISVFGCM 594
              +  ++++++     D IP    I+   + G++  A  V+++  +     D+ V+G +
Sbjct: 559 HKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVL 618

Query: 595 IDLFSRNKRHKNVVEVFEKMRSVGHFPSSNVIALVLNAYGKLRDFDKADAVYMEMQEQGC 654
           I+ F+     +  +   E M+  G   +S +   ++  Y K+   D+A+A+Y ++  Q C
Sbjct: 619 INAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLL-QSC 678

Query: 655 ---VFPDEVHFQ-MLSLYGARKDYKRLEELFERLDSDPNINKKELHLVVAGIYERANRLN 682
               +PD      M++LY  R   ++ E +F+ +      N+    +++  +Y++  R  
Sbjct: 679 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLC-MYKKNGRFE 738

The following BLAST results are available for this feature:
BLAST of CmaCh14G006090 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLD87.6e-29476.11Pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Arabidop... [more]
Q9LQ141.7e-5129.74Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Q9S7Q22.4e-5021.86Pentatricopeptide repeat-containing protein At1g74850, chloroplastic OS=Arabidop... [more]
Q9LQ166.0e-4928.48Pentatricopeptide repeat-containing protein At1g62910 OS=Arabidopsis thaliana OX... [more]
Q9LYZ97.8e-4925.77Pentatricopeptide repeat-containing protein At5g02860 OS=Arabidopsis thaliana OX... [more]
BLAST of CmaCh14G006090 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J8J40.0e+00100.00pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A6J1F2M90.0e+0098.83pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucurbit... [more]
A0A5A7UGV70.0e+0092.60Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3B8T90.0e+0092.60pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Cucumis ... [more]
A0A6J1DYU70.0e+0090.01pentatricopeptide repeat-containing protein At5g39980, chloroplastic OS=Momordic... [more]
BLAST of CmaCh14G006090 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983728.10.0e+00100.00pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
XP_022934402.10.0e+0098.83pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Cucurbita ... [more]
KAG6580983.10.0e+0098.54Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
XP_023521621.10.0e+0098.25pentatricopeptide repeat-containing protein At5g39980, chloroplastic-like [Cucur... [more]
KAG7017725.10.0e+0098.66Pentatricopeptide repeat-containing protein, chloroplastic, partial [Cucurbita a... [more]
BLAST of CmaCh14G006090 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G39980.15.4e-29576.11Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G62930.11.2e-5229.74Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74850.11.7e-5121.86plastid transcriptionally active 2 [more]
AT1G62910.14.3e-5028.48Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G23020.14.3e-5023.62Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 512..683
e-value: 4.4E-21
score: 77.5
coord: 353..511
e-value: 2.5E-41
score: 144.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 110..245
e-value: 4.8E-24
score: 86.7
coord: 246..351
e-value: 8.6E-28
score: 98.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 270..304
e-value: 1.6E-7
score: 29.1
coord: 445..478
e-value: 1.3E-4
score: 19.9
coord: 305..338
e-value: 2.2E-5
score: 22.3
coord: 341..374
e-value: 2.9E-7
score: 28.2
coord: 166..193
e-value: 0.001
score: 17.1
coord: 410..444
e-value: 3.8E-8
score: 31.0
coord: 586..615
e-value: 3.2E-7
score: 28.1
coord: 547..579
e-value: 1.7E-4
score: 19.5
coord: 200..232
e-value: 2.7E-6
score: 25.2
coord: 375..408
e-value: 3.8E-6
score: 24.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 162..207
e-value: 1.4E-10
score: 41.2
coord: 302..348
e-value: 2.8E-10
score: 40.2
coord: 408..451
e-value: 9.7E-15
score: 54.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 222..281
e-value: 1.6E-9
score: 37.7
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 547..575
e-value: 0.0019
score: 18.3
coord: 375..404
e-value: 2.2E-4
score: 21.2
coord: 480..506
e-value: 0.27
score: 11.6
coord: 586..611
e-value: 0.0012
score: 19.0
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..407
score: 10.215989
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 11.520384
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 579..613
score: 8.922556
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 10.303679
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 478..512
score: 8.692369
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 9.229472
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 11.301158
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 408..442
score: 12.320559
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 198..232
score: 9.941957
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 163..197
score: 9.382931
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 544..578
score: 10.117337
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 443..477
score: 10.270796
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..96
NoneNo IPR availablePANTHERPTHR47447:SF7PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN, CHLOROPLASTICcoord: 15..680
NoneNo IPR availablePANTHERPTHR47447OS03G0856100 PROTEINcoord: 15..680

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G006090.1CmaCh14G006090.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009658 chloroplast organization
biological_process GO:0031425 chloroplast RNA processing
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding