CmaCh14G005100 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G005100
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr14: 2488325 .. 2489330 (+)
RNA-Seq Expression	CmaCh14G005100
Synteny	CmaCh14G005100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACAAGCAGCACTCCCAAGCTTCCCCATCCGCCTTCTTTGACCGTGTATGGTGTGGACAGCAGCCCTACCCCAGCCATGAAGTTCATTCCTGCCACACCCCGAACCCCAACCCCAACCCCAACCGTTTAATAATATTCTTAAACTCGACTTCAATTTTTAAGAATTACAGTTAGCTTTACCGTTAAAAATGGTCTGTGTGAAGGTGCAGCCGTGAGGAGAAGATACTGATGGGGTAGACGAGATCTCGTACTCTAATTGGTGTCCCTCGTCGTCATAATAATTGGTTAATAACGGAGTCTTTCTATCGTCACTGATCTCAGACTCCAATAAACTCTCGATTCTATTCTGGAAGCTTGATTTTATGATTGATGGAATCCGTAGAATCCCGAACGTTGGTGAATTTGTTATTGCGTATGAATCGCTTGCTTCCCTACCATTTTTACATAAACCGTGTGAAAGTTATTTTATTTATAATCAAATAAATTACAAAGAATAATAAACGTAAATAATAATAAATAGGAAAAATATCTAAATATTTGTTTTATAATAAAATATTAATATAATATACATCACATTTCTAATCTAATTCAAATTTTTACCCTTTTGAAAATTATTTTTTATTTTGTTTTGAAAAGTTATTTGAATTTTTAACCGTATATTAAAAATAAAAATATTTTTTTATAGTCGATTTTGAAAATTATAGATTTTGAAATCAAATTATAAAAAATAAGAAATAAATAAAAATAAAAATAAAAAAAGAGAGAGAGAACATTAAGCAGTTTCAAACGCACCTGAAAGTTTGCGGCCATTGTTGAGAAGCGGAGGCGGAGCTGCAACCTCGACGGAGACACCTAGCAACGGCGGCGGAGGAGTTATCTCCGTCGCTGAAACTGCCACAACTACTACCACTACTTTCCGTTCCCTTATTGTTCATCTCCATATCGTCTTCTTGATTTTGTTGGCCGCCATTGTACGGTGGCTCGAGGAAAAGCTCTGA

mRNA sequence

ATGGCGAAAACAAGCAGCACTCCCAAGCTTCCCCATCCGCCTTCTTTGACCGTGTATGTTTCAAACGCACCTGAAAGTTTGCGGCCATTGTTGAGAAGCGGAGGCGGAGCTGCAACCTCGACGGAGACACCTAGCAACGGCGGCGGAGGAGTTATCTCCGTCGCTGAAACTGCCACAACTACTACCACTACTTTCCGTTCCCTTATTGTTCATCTCCATATCGTCTTCTTGATTTTGTTGGCCGCCATTGTACGGTGGCTCGAGGAAAAGCTCTGA

Coding sequence (CDS)

ATGGCGAAAACAAGCAGCACTCCCAAGCTTCCCCATCCGCCTTCTTTGACCGTGTATGTTTCAAACGCACCTGAAAGTTTGCGGCCATTGTTGAGAAGCGGAGGCGGAGCTGCAACCTCGACGGAGACACCTAGCAACGGCGGCGGAGGAGTTATCTCCGTCGCTGAAACTGCCACAACTACTACCACTACTTTCCGTTCCCTTATTGTTCATCTCCATATCGTCTTCTTGATTTTGTTGGCCGCCATTGTACGGTGGCTCGAGGAAAAGCTCTGA

Protein sequence

MAKTSSTPKLPHPPSLTVYVSNAPESLRPLLRSGGGAATSTETPSNGGGGVISVAETATTTTTTFRSLIVHLHIVFLILLAAIVRWLEEKL

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh14G005100 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G005100 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G005100 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G005100 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..51
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..51

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G005100.1	CmaCh14G005100.1	mRNA