CmaCh14G004870 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh14G004870
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionaladin
LocationCma_Chr14: 2385362 .. 2387603 (-)
RNA-Seq ExpressionCmaCh14G004870
SyntenyCmaCh14G004870
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCATCAATCTTTAAAAGGATCTCCATTGGAAAATCCGACTACGGACCCGAACCAGTGGGCGGGAAAATCCGGTGCTCAAACAATCCAAGAACTTCGCCGGAATCAAATTCAGTTCTCGAGCTGAATTGGGCAGAAATTCAGTCATTTGATCCATTTAGGGCTTTTAAGTTTCCTCATAATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCAGTTAGTATCGAATTCTTACTTTGCTTCTCATGTATATAGTTCCAGTGTTCTACTTTTTATGATATTGAGCATCTGTTTTGTGAATTTCTTACTATTCAGTTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGTGAGTAATGATAGTTGAAATTTATTGTTGATGTTAGCGTTCTCTTCAGGCGCGATGTTTTTTGTTTATTGAATTTGTGGATGTGGCGTTTAACAGGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAGTTTAATAATTGTTAATAGCTAATCGTGTGGTTCAGAATCATTTCTAAATGCCGGTACAGTTCAGAAGAACTGTGTGTAGTTTTGTTCCATCCTTTTTTATTTTTTGTTTACAAGAGATCAGTCTTAAATGTTTTCTCTTAACAAATGAAAATATTCCATTTCATCTAAACAAAGAAAATTTTGGCTCAAAAAAGAAGAATTTGATTGTCTACATGAAATTAGTTTGCTAACCCAACTTCATAACAATAACAATCCTTCAATATCATTTTGTGTAAGGCATTCTGAAATCCTAGATCTTGTTCAATATAATTCATACCTAAGGCACTATAACACGATAAATTGTTAGGTTAGGAAATATTTGTAAGCATTTCCGCACGGACAACTTCGTTGCACTTAGGGACACATAGAGAAAAAATTGCTAGGCAATTTAATTTTAGTTTGCTATTACATTTTAATTGTTGTATCCTACTCCTACTGGCGTACCCTATATATATTGGCAACAAGGAAACATTTTGAAGTTCATGGTGCCTTTAAGTTTTTACTTAGAAATGATTGTTGGGGTTCAATAAATTCGAATACAGAAGATATGAAATTTAAAATGGTGTCTTTAAATTACACATCCATTGTAATTTTTAGGAAGTTCATCATTTCTTTTTTTGCATGGATAAAAATGGTTGCTTTATGGAACTCTATTTACTTTGAAGTTCTGAAGTTGTTAAAAGATACATTGGAGTTTAGTAAATTGACTGCAACGTGCATTCCAAAAGTAAAGCACATGCTTTGTAACTTGTGAATGAAAGTTAAGCAACTTATGCTCACTGATCAATTTTATAGGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGGTCATCGAATCTGATTCACCATATGACTTGGTTAAAGTTTTGTAATCTTTTTATTTGTATATAGAAGTAGCGTTGTTGTATTTGTACTGTTCATTTCATCTTAGAATTTGTTGTTCAATTTCTTTCAAATAATGCGAATGTATTTTATGTTCTGGACAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAGTAAGTACCTTAGAGCTGCAATCTTATCATTTAAAATAAACACTATATATCTTAGAACTTTAGATGACAAAACTATTTCTCGCAAGAATGTTTACCATTAACTCAACTTGAGATTCTTGGACTGAATGTTCTTTCAGAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

mRNA sequence

TCTCATCAATCTTTAAAAGGATCTCCATTGGAAAATCCGACTACGGACCCGAACCAGTGGGCGGGAAAATCCGGTGCTCAAACAATCCAAGAACTTCGCCGGAATCAAATTCAGTTCTCGAGCTGAATTGGGCAGAAATTCAGTCATTTGATCCATTTAGGGCTTTTAAGTTTCCTCATAATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCATTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

Coding sequence (CDS)

ATGCCTTCATTTCCTCCTCCTGGGTCTGTTACCATCTGCGAAATCAATCGCGACCTCATTACTGCTGATCGAATCTCCGATGATCTAGCGAACGACACTTATGGGAAAGTCCTTGGTATGGTGTTTAGTCCTGTTCCATTTCAGTCCGATTTTTTGGTGTCGCCGAATCCTGAACCGAACAATGAGGCTAGAAACGATGAAGCAAATGGGGAAAGTATCCAAAGGAAGAGTGTGATTGCATCTTTGCAGGGATTCCTCGAGGACTCCATCAAGCGTTTTTTACGTCCTAATGATGTAAAATACTTACCAGCAGAATATCTTCAAGGAATGAGTTGGCACCAGCACAAGCATATTTTAGCATTCATATCTGGGACGAATCAAGTTGTTGTCCGTGATTTTGAAAATGCAGAAGGAAAAGACCCTTGCATTTTGACCCACGACTTGCAAAAGGATGTTAAAGTTCTTGAGTGGAGACCAAATGGCGGGAGGACCCTTTCGGTGGCATGCAAAGATGGAATTTGCATCTGGGCTGCTTCTTTCCCAGGAAATGCTGCTTCGGTGAGACCTGGTGCCGTGTCCTTTTTAGGATCATTCTCAAGAGGCTCTGGGGTTCGATATACCCTAGTTGATTTTCTTCGGACCCGTGATGAACAGATTAGTGCCCTGTCATGGAGTCCTGATGGAAGATATCCAAATAAATTAAAGAAATTTAGTCCTTTGCATGATAGTTGA

Protein sequence

MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPNNEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRYPNKLKKFSPLHDS
Homology
[Close]
BLAST of CmaCh14G004870 vs. ExPASy Swiss-Prot
Match: Q8GWR1 (Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 1.7e-75
Identity = 143/233 (61.37%), Postives = 176/233 (75.54%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           M SFP PGSVT+CEINRDLITA  +SD+ A +TYGKVLGMVFSPV F S    +P+    
Sbjct: 1   MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDS----TPSSLQE 60

Query: 61  NEAR--NDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHI 120
           NE +   D+A+GES   K ++A+LQ  + DS+K+ L+P DV  L    LQG+SWHQ KHI
Sbjct: 61  NEGQENGDKASGES---KGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHI 120

Query: 121 LAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAA 180
           +AFISG NQV +RD+E+ + K+PCILT D Q++VK LEWRPNGG++LS+AC+ GICIWAA
Sbjct: 121 IAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAA 180

Query: 181 SFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTR-DEQISALSWSPDGRY 231
           S+PGN A VR G  +  GS SRGSG R+ LVDFLR + DEQISALSWSP GRY
Sbjct: 181 SYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRY 226

[Close]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match: A0A6J1J094 (aladin OS=Cucurbita maxima OX=3661 GN=LOC111482293 PE=4 SV=1)

HSP 1 Score: 478.4 bits (1230), Expect = 1.8e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match: A0A6J1F6N8 (aladin OS=Cucurbita moschata OX=3662 GN=LOC111441364 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.4e-130
Identity = 227/230 (98.70%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLE SIKRFLRPNDVKYLPAEYLQG+SWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match: A0A5A7UJP0 (Aladin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006370 PE=4 SV=1)

HSP 1 Score: 441.8 bits (1135), Expect = 1.8e-120
Identity = 212/241 (87.97%), Postives = 221/241 (91.70%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGKVLGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKVLGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDEANGE IQRK VIASLQGF+E SI RFLRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEANGEIIQRKGVIASLQGFIEGSINRFLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVV D+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTL      GICIWAASF
Sbjct: 121 FISGTNQVVVHDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLG-----GICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRYPNKLKKFSPL 240
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSP+GRYPN+L  FSPL
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPNGRYPNQLTNFSPL 236

Query: 241 H 242
           H
Sbjct: 241 H 236

[Close]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match: A0A1S3B899 (aladin OS=Cucumis melo OX=3656 GN=LOC103486859 PE=4 SV=1)

HSP 1 Score: 440.3 bits (1131), Expect = 5.3e-120
Identity = 209/230 (90.87%), Postives = 217/230 (94.35%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGKVLGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKVLGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDEANGE IQRK VIASLQGF+E SI RFLRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEANGEIIQRKGVIASLQGFIEGSINRFLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVV D+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACK GICIWAASF
Sbjct: 121 FISGTNQVVVHDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSP+GRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPNGRY 230

[Close]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match: A0A0A0LH99 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G816680 PE=4 SV=1)

HSP 1 Score: 439.5 bits (1129), Expect = 9.1e-120
Identity = 207/230 (90.00%), Postives = 216/230 (93.91%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITAD +SDD ANDTYGK+LGMVFSPVPFQSDFLVSP PEP 
Sbjct: 1   MPSFPPPGSVTICEINRDLITADCLSDDRANDTYGKILGMVFSPVPFQSDFLVSPTPEPK 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NE RNDE NGE IQRK VIASLQGF+E S+ R LRPNDVKYLP EYLQG+SWHQHKHI+A
Sbjct: 61  NEPRNDEVNGEIIQRKGVIASLQGFIEGSVNRLLRPNDVKYLPTEYLQGVSWHQHKHIIA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRD+ENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACK GICIWAASF
Sbjct: 121 FISGTNQVVVRDYENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKGGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLR+ DEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRSHDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. NCBI nr
Match: XP_022983772.1 (aladin [Cucurbita maxima])

HSP 1 Score: 478.4 bits (1230), Expect = 3.7e-131
Identity = 230/230 (100.00%), Postives = 230/230 (100.00%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. NCBI nr
Match: XP_022934085.1 (aladin [Cucurbita moschata])

HSP 1 Score: 473.0 bits (1216), Expect = 1.5e-129
Identity = 227/230 (98.70%), Postives = 229/230 (99.57%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLE SIKRFLRPNDVKYLPAEYLQG+SWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. NCBI nr
Match: XP_023527318.1 (aladin isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 467.2 bits (1201), Expect = 8.4e-128
Identity = 225/230 (97.83%), Postives = 227/230 (98.70%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFL SP PEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLESPIPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLE SIKRFLRPNDVKYLPAEYLQG+SWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 230

[Close]
BLAST of CmaCh14G004870 vs. NCBI nr
Match: XP_023527319.1 (aladin isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.7 bits (1184), Expect = 7.9e-126
Identity = 224/230 (97.39%), Postives = 226/230 (98.26%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFL SP PEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLESPIPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLE SIKRFLRPNDVKYLPAEYLQG+SWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENA GKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENA-GKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 231
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWSPDGRY 229

[Close]
BLAST of CmaCh14G004870 vs. NCBI nr
Match: KAG7017619.1 (Aladin [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 459.5 bits (1181), Expect = 1.8e-125
Identity = 221/225 (98.22%), Postives = 224/225 (99.56%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN
Sbjct: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60

Query: 61  NEARNDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHILA 120
           NEARNDEANGESIQRKSVIASLQGFLE SIKRFLRPNDVKYLPAEYLQG+SWHQHKHILA
Sbjct: 61  NEARNDEANGESIQRKSVIASLQGFLEGSIKRFLRPNDVKYLPAEYLQGVSWHQHKHILA 120

Query: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAASF 180
           FISGTNQVVVRDFENAEGKDPCILTHDLQ+DVKVLEWRPNGGRTLSVACKDGICIWAASF
Sbjct: 121 FISGTNQVVVRDFENAEGKDPCILTHDLQRDVKVLEWRPNGGRTLSVACKDGICIWAASF 180

Query: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWS 226
           PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSW+
Sbjct: 181 PGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTRDEQISALSWT 225

[Close]
BLAST of CmaCh14G004870 vs. TAIR 10
Match: AT3G56900.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.2e-76
Identity = 143/233 (61.37%), Postives = 176/233 (75.54%), Query Frame = 0 

Query: 1   MPSFPPPGSVTICEINRDLITADRISDDLANDTYGKVLGMVFSPVPFQSDFLVSPNPEPN 60
           M SFP PGSVT+CEINRDLITA  +SD+ A +TYGKVLGMVFSPV F S    +P+    
Sbjct: 1   MASFPHPGSVTVCEINRDLITAQNLSDERAQETYGKVLGMVFSPVSFDS----TPSSLQE 60

Query: 61  NEAR--NDEANGESIQRKSVIASLQGFLEDSIKRFLRPNDVKYLPAEYLQGMSWHQHKHI 120
           NE +   D+A+GES   K ++A+LQ  + DS+K+ L+P DV  L    LQG+SWHQ KHI
Sbjct: 61  NEGQENGDKASGES---KGLVATLQMKVADSLKQILQPTDVTLLSEIDLQGVSWHQGKHI 120

Query: 121 LAFISGTNQVVVRDFENAEGKDPCILTHDLQKDVKVLEWRPNGGRTLSVACKDGICIWAA 180
           +AFISG NQV +RD+E+ + K+PCILT D Q++VK LEWRPNGG++LS+AC+ GICIWAA
Sbjct: 121 IAFISGANQVTIRDYEDKDEKEPCILTSDSQRNVKALEWRPNGGKSLSIACRGGICIWAA 180

Query: 181 SFPGNAASVRPGAVSFLGSFSRGSGVRYTLVDFLRTR-DEQISALSWSPDGRY 231
           S+PGN A VR G  +  GS SRGSG R+ LVDFLR + DEQISALSWSP GRY
Sbjct: 181 SYPGNMALVRSGGSALRGSLSRGSGTRWILVDFLRCQNDEQISALSWSPCGRY 226

The following BLAST results are available for this feature:
BLAST of CmaCh14G004870 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8GWR11.7e-7561.37Aladin OS=Arabidopsis thaliana OX=3702 GN=AAAS PE=1 SV=1[more]
BLAST of CmaCh14G004870 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J0941.8e-131100.00aladin OS=Cucurbita maxima OX=3661 GN=LOC111482293 PE=4 SV=1[more]
A0A6J1F6N87.4e-13098.70aladin OS=Cucurbita moschata OX=3662 GN=LOC111441364 PE=4 SV=1[more]
A0A5A7UJP01.8e-12087.97Aladin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G006370 PE=4 S... [more]
A0A1S3B8995.3e-12090.87aladin OS=Cucumis melo OX=3656 GN=LOC103486859 PE=4 SV=1[more]
A0A0A0LH999.1e-12090.00WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G... [more]
BLAST of CmaCh14G004870 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983772.13.7e-131100.00aladin [Cucurbita maxima][more]
XP_022934085.11.5e-12998.70aladin [Cucurbita moschata][more]
XP_023527318.18.4e-12897.83aladin isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_023527319.17.9e-12697.39aladin isoform X2 [Cucurbita pepo subsp. pepo][more]
KAG7017619.11.8e-12598.22Aladin [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of CmaCh14G004870 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G56900.11.2e-7661.37Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 73..230
e-value: 7.7E-9
score: 36.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..72
IPR045139AladinPANTHERPTHR14494ALADIN/ADRACALIN/AAAScoord: 1..49
coord: 72..230
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 105..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh14G004870.1CmaCh14G004870.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0005643 nuclear pore
molecular_function GO:0005515 protein binding