CmaCh14G004200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G004200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	VQ motif-containing protein 25-like
Location	Cma_Chr14: 1973655 .. 1974458 (-)
RNA-Seq Expression	CmaCh14G004200
Synteny	CmaCh14G004200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTGAAGAAACTCAATTTGCTTGATTTTTTTTTTTTTTTTTTTTTTTAATTTGCTAATTACTCTCCAATTTTCTGTGGTTAATTATATTACATAATTAATTACCATTTGGGTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTAATTTGCTAATTACTCTCCAATTTTCTGTGGTTAATTATATTACATAATTAATTACCATTTGGGTTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTGGTGTATTAAATGGTTTGTTTGTGGGAAAATATACATTTTTCTTTTTTATTTTCACATTTTCTTTTTATAGGTTTTTAG

mRNA sequence

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTTAG

Coding sequence (CDS)

ATGGAGGCGATTATGAAGAAACGGGCTCTGTTGCAGAACTCGGCGCGCCCGGGGGCCATGGCGTTGCACACAGCTTCACACGCAATTTCCAAGCCCAAACCGAAGATTCGTATCATTCACATCTTCGCACCGGAGATTATTAAAACCGACGTCGCTAATTTCCGCGAGCTCGTTCAGAGACTGACTGGAAAGCCGGCGACGGCGGAGGAGAAGATTGTTCCGCCTCAAATTCCTCCGGCAGCAGTGGCGGATGTTGCGACGGCGTTTGATCATCGGAAGTCGGAGATGGGCGGCGGAGAGTGTCGGAGAGTGAAGACGGAAGATCGGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAAGAAGAAGAAGAGGCGTTGAGCGACGTGGTTGGGTTGTGGAACGACGTCGTTGGGTTCGAAGGGTTTATTGAAGAATTGGGTGAAATTCCACTGCTTCCTTCTGCTCACCAAATAATGCATGGTTTTTAG

Protein sequence

MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF

Homology

[Close]

BLAST of CmaCh14G004200 vs. ExPASy Swiss-Prot
Match: Q9M2P8 (VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-12
Identity = 61/146 (41.78%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 19  AMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIP 78
           ++A+H  S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP         P+  
Sbjct: 15  SIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPRRD 74

Query: 79  PAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALS--------- 138
              +        HR+ +        + TE   E E  ++E     EE +++         
Sbjct: 75  MHRL--------HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAGE 134

Query: 139 DVVGLWNDVVGFEGFIEELGEIPLLP 156
              G  N +  FEGFI+ELGE P LP
Sbjct: 135 SSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CmaCh14G004200 vs. ExPASy Swiss-Prot
Match: O48522 (VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 8.5e-10
Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPP 79
           +A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTGK       +       
Sbjct: 17  IAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTGKQDHHHHDL------- 76

Query: 80  AAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEE----EEEEEEEALSDVV--- 139
                      H+K        RR  + D  E  +  +        +EEEE +  +    
Sbjct: 77  ----------PHQKGLKRNPRSRR--SHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNG 136

Query: 140 -------GLWNDVVGFEGFIEELGEIPLLP 156
                  G  N +   +GFI+ELGE P LP
Sbjct: 137 NGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CmaCh14G004200 vs. ExPASy Swiss-Prot
Match: O64868 (VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.8e-07
Identity = 57/159 (35.85%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
           ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA  E K        
Sbjct: 17  VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76

Query: 80  -IVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSD 139
            I  PQ P   V D     DH+      G    +      + +EE    ++         
Sbjct: 77  RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136

Query: 140 VVGLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 165
                N     EG I+++GE      P+  S+   + GF
Sbjct: 137 -----NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158

[Close]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL
Match: A0A6J1IYE1 (VQ motif-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111481765 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 4.8e-80
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 164

[Close]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL
Match: A0A6J1F598 (VQ motif-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC111442255 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.1e-76
Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKRALLQNSARP AMA+H ASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPP AVAD+ATAFDHRKSEMGGGECRRVKTEDR  EEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDR--EEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 162

[Close]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL
Match: A0A5A7TRB0 (VQ motif-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005450 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 121/179 (67.60%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   MEAIMKKRA----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
           M+AI+K +     LL  S RP  M LH+ASHAISKPKPKIRIIHIFAPEIIKTDVANFRE
Sbjct: 1   MDAILKNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60

Query: 61  LVQRLTGKP---ATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRV---KTEDRE 120
           LVQRLTGKP    T E+KI+PPQIP AA      AFD+RK+EM    CRR+   + ED+E
Sbjct: 61  LVQRLTGKPEAITTQEDKILPPQIPAAA------AFDNRKTEM--VSCRRMVKKEDEDQE 120

Query: 121 EEEEEEEEEEE-----EEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           E+ +EEEEEEE     EEEEE L +VVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGF
Sbjct: 121 EDYDEEEEEEEGEGEGEEEEEMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGF 171

[Close]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL
Match: A0A1S3B6P9 (VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 4.1e-47
Identity = 121/179 (67.60%), Postives = 138/179 (77.09%), Query Frame = 0


Query: 1   MEAIMKKRA----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60
           M+AI+K +     LL  S RP  M LH+ASHAISKPKPKIRIIHIFAPEIIKTDVANFRE
Sbjct: 1   MDAILKNQRQRPHLLPTSPRPSTMPLHSASHAISKPKPKIRIIHIFAPEIIKTDVANFRE 60

Query: 61  LVQRLTGKP---ATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRV---KTEDRE 120
           LVQRLTGKP    T E+KI+PPQIP AA      AFD+RK+EM    CRR+   + ED+E
Sbjct: 61  LVQRLTGKPEAITTQEDKILPPQIPAAA------AFDNRKTEM--VSCRRMVKKEDEDQE 120

Query: 121 EEEEEEEEEEE-----EEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           E+ +EEEEEEE     EEEEE L +VVG+WNDVVGFEGFI+ELGE PL+PSAHQIMHGF
Sbjct: 121 EDYDEEEEEEEGEGEGEEEEEMLDEVVGMWNDVVGFEGFIQELGEFPLIPSAHQIMHGF 171

[Close]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL
Match: A0A0A0LBB1 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.8e-39
Identity = 107/159 (67.30%), Postives = 124/159 (77.99%), Query Frame = 0


Query: 1   MEAIMKKRA-----LLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFR 60
           MEAI+ K+      LL  SARP +MALH+ASH ISKPKPKIRIIHIFAPEIIKTDVANFR
Sbjct: 1   MEAILIKKQRQRPHLLPTSARPSSMALHSASHPISKPKPKIRIIHIFAPEIIKTDVANFR 60

Query: 61  ELVQRLTGKP-ATAEEKIVPPQIPPAAVADVATAFDHRKSE-MGGGECRRVKTEDREEEE 120
           ELVQRLTGKP AT + KI+PP+IPPAA      AFD+RK+E + G  CRR     R  ++
Sbjct: 61  ELVQRLTGKPEATEDGKILPPEIPPAA------AFDNRKTEIVSGVGCRR-----RMVKK 120

Query: 121 EEEEEEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIP 153
           E+E +EE+EEEEE L DVVG+WNDVVGFEGFI+ELGE P
Sbjct: 121 EDEYQEEDEEEEEMLEDVVGMWNDVVGFEGFIQELGEFP 148

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: XP_022983122.1 (VQ motif-containing protein 25-like [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 9.8e-80
Identity = 164/164 (100.00%), Postives = 164/164 (100.00%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 164

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: XP_022935342.1 (VQ motif-containing protein 25-like [Cucurbita moschata])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKRALLQNSARP AMA+H ASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRALLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPP AVAD+ATAFDHRKSEMGGGECRRVKTEDR  EEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDR--EEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 162

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: XP_023528893.1 (VQ motif-containing protein 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 293.1 bits (749), Expect = 1.5e-75
Identity = 158/167 (94.61%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKR LLQNSARP AMA+HTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRTLLQNSARPAAMAVHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDR---EEEEEEEE 120
           LTGKPATAEEKIVPPQIPP AVAD+ TAFDHRKSEMGGGECRRVKTEDR   EEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPVAVADIVTAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120

Query: 121 EEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 167

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: KAG7017559.1 (VQ motif-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 291.6 bits (745), Expect = 4.3e-75
Identity = 156/164 (95.12%), Postives = 158/164 (96.34%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKR LLQNSARP AMA+H ASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRTLLQNSARPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPP AVAD+ATAFDHRKSEMGGGECRRVKTEDR  EEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDR--EEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 162

[Close]

BLAST of CmaCh14G004200 vs. NCBI nr
Match: KAG6580809.1 (VQ motif-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 155/164 (94.51%), Postives = 157/164 (95.73%), Query Frame = 0


Query: 1   MEAIMKKRALLQNSARPGAMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60
           MEAIMKKR LLQNS RP AMA+H ASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR
Sbjct: 1   MEAIMKKRTLLQNSGRPAAMAVHAASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQR 60

Query: 61  LTGKPATAEEKIVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEE 120
           LTGKPATAEEKIVPPQIPP AVAD+ATAFDHRKSEMGGGECRRVKTEDR  EEEEEEEEE
Sbjct: 61  LTGKPATAEEKIVPPQIPPVAVADIATAFDHRKSEMGGGECRRVKTEDR--EEEEEEEEE 120

Query: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 165
           EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF
Sbjct: 121 EEEEEEALSDVVGLWNDVVGFEGFIEELGEIPLLPSAHQIMHGF 162

[Close]

BLAST of CmaCh14G004200 vs. TAIR 10
Match: AT3G58000.1 (VQ motif-containing protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-13
Identity = 61/146 (41.78%), Postives = 79/146 (54.11%), Query Frame = 0


Query: 19  AMALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIP 78
           ++A+H  S++I+K KPKIRIIHIFAPEIIKTDVANFRELVQ LTGKP         P+  
Sbjct: 15  SIAVHKQSYSITKSKPKIRIIHIFAPEIIKTDVANFRELVQSLTGKPDDQRTSKAKPRRD 74

Query: 79  PAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALS--------- 138
              +        HR+ +        + TE   E E  ++E     EE +++         
Sbjct: 75  MHRL--------HRQVQ------DMINTEKLREPEHCDQEFCLNAEELSMTWNGNNGAGE 134

Query: 139 DVVGLWNDVVGFEGFIEELGEIPLLP 156
              G  N +  FEGFI+ELGE P LP
Sbjct: 135 SSGGFLNGLGDFEGFIQELGEFPYLP 146

[Close]

BLAST of CmaCh14G004200 vs. TAIR 10
Match: AT2G42140.1 (VQ motif-containing protein )

HSP 1 Score: 65.1 bits (157), Expect = 6.1e-11
Identity = 56/150 (37.33%), Postives = 72/150 (48.00%), Query Frame = 0


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEKIVPPQIPP 79
           +A+H  S  ++K KPKIRIIHIFAPEIIKTDVANFRE+VQ LTGK       +       
Sbjct: 17  IAMHKQSRTLTKSKPKIRIIHIFAPEIIKTDVANFREIVQNLTGKQDHHHHDL------- 76

Query: 80  AAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEE----EEEEEEEALSDVV--- 139
                      H+K        RR  + D  E  +  +        +EEEE +  +    
Sbjct: 77  ----------PHQKGLKRNPRSRR--SHDHHEVHDMNKSHGFCINSDEEEEGMVSMTWNG 136

Query: 140 -------GLWNDVVGFEGFIEELGEIPLLP 156
                  G  N +   +GFI+ELGE P LP
Sbjct: 137 NGDESSGGFLNGLGDLDGFIQELGEFPYLP 147

[Close]

BLAST of CmaCh14G004200 vs. TAIR 10
Match: AT3G60090.1 (VQ motif-containing protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.8e-10
Identity = 39/77 (50.65%), Postives = 47/77 (61.04%), Query Frame = 0


Query: 26  SHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKP----ATAEEKI------VPP 85
           S  I+K KPKIRIIHIFAPEII TDV NFR LVQ LTGKP      +++KI       PP
Sbjct: 35  SQIITKIKPKIRIIHIFAPEIINTDVKNFRTLVQSLTGKPEITKTGSKKKITNTNFPAPP 94

Query: 86  QIPPAAVADVATAFDHR 93
            +P  +  +     D+R
Sbjct: 95  GLPQDSGQEHTAELDNR 111

[Close]

BLAST of CmaCh14G004200 vs. TAIR 10
Match: AT2G44340.1 (VQ motif-containing protein )

HSP 1 Score: 55.5 bits (132), Expect = 4.8e-08
Identity = 57/159 (35.85%), Postives = 74/159 (46.54%), Query Frame = 0


Query: 20  MALHTASHAISKPKPKIRIIHIFAPEIIKTDVANFRELVQRLTGKPATAEEK-------- 79
           ++++  S  ISK KPKIRIIHIFAPE+IKTDV NFR LVQ LTGKPA  E K        
Sbjct: 17  VSMNRNSQVISKIKPKIRIIHIFAPEVIKTDVKNFRSLVQSLTGKPAPGEAKTGKKRAKS 76

Query: 80  -IVPPQIPPAAVADVATAFDHRKSEMGGGECRRVKTEDREEEEEEEEEEEEEEEEEALSD 139
            I  PQ P   V D     DH+      G    +      + +EE    ++         
Sbjct: 77  RITTPQEP---VCD-----DHQPVNRLSGFTGLLANGGNHQVKEEWGSGDQSTSNT---- 136

Query: 140 VVGLWNDVVGFEGFIEELGE-----IPLLPSAHQIMHGF 165
                N     EG I+++GE      P+  S+   + GF
Sbjct: 137 -----NTYFDLEGLIQDVGEDYFSSFPMRSSSSSQVEGF 158

The following BLAST results are available for this feature:

BLAST of CmaCh14G004200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2P8	5.4e-12	41.78	VQ motif-containing protein 25 OS=Arabidopsis thaliana OX=3702 GN=VQ25 PE=3 SV=1	[more]
O48522	8.5e-10	37.33	VQ motif-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=VQ17 PE=2 SV=1	[more]
O64868	6.8e-07	35.85	VQ motif-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=VQ18 PE=3 SV=1	[more]

BLAST of CmaCh14G004200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IYE1	4.8e-80	100.00	VQ motif-containing protein 25-like OS=Cucurbita maxima OX=3661 GN=LOC111481765 ...	[more]
A0A6J1F598	7.1e-76	95.73	VQ motif-containing protein 25-like OS=Cucurbita moschata OX=3662 GN=LOC11144225...	[more]
A0A5A7TRB0	4.1e-47	67.60	VQ motif-containing protein 25-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3B6P9	4.1e-47	67.60	VQ motif-containing protein 25-like OS=Cucumis melo OX=3656 GN=LOC103486769 PE=4...	[more]
A0A0A0LBB1	1.8e-39	67.30	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G807350 PE=4 SV=...	[more]

BLAST of CmaCh14G004200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022983122.1	9.8e-80	100.00	VQ motif-containing protein 25-like [Cucurbita maxima]	[more]
XP_022935342.1	1.5e-75	95.73	VQ motif-containing protein 25-like [Cucurbita moschata]	[more]
XP_023528893.1	1.5e-75	94.61	VQ motif-containing protein 25-like [Cucurbita pepo subsp. pepo]	[more]
KAG7017559.1	4.3e-75	95.12	VQ motif-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6580809.1	1.2e-74	94.51	VQ motif-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh14G004200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58000.1	3.8e-13	41.78	VQ motif-containing protein	[more]
AT2G42140.1	6.1e-11	37.33	VQ motif-containing protein	[more]
AT3G60090.1	1.8e-10	50.65	VQ motif-containing protein	[more]
AT2G44340.1	4.8e-08	35.85	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 101..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..129
IPR008889	VQ	PFAM	PF05678	VQ	coord: 41..67 e-value: 7.5E-13 score: 47.7
IPR039834	VQ motif-containing protein 17/25	PANTHER	PTHR33143:SF3	VQ MOTIF-CONTAINING PROTEIN 17-RELATED	coord: 5..155
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 5..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G004200.1	CmaCh14G004200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus