CmaCh14G004180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G004180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DNA polymerase delta small subunit
Location	Cma_Chr14: 1959751 .. 1964456 (-)
RNA-Seq Expression	CmaCh14G004180
Synteny	CmaCh14G004180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATTTTTAAGCGAGGGAATTCTACGGTTCTACCCTACCGATTGAGGTTCGTCGGAGTAAAATCATTCTCTTCCTCGCCATGGAAATCGATTCACAGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGTATCTCTCAGTCTCTTCTATTTCTTAGTTCGCTGTTAATTTCCTCGAAAGTTCTTTTGGCTTTCCCGCCTTTTTTCTTTCCCCCAGCACGGCTACTTTGGAAGTGGGAGAAAATTTCCCTTGTTATTTGCTCGTTTCACTTACTTCAGTAACGGAATACAATGAAGGCCGGAAAATGCGCGGGAATTGGGAACAATCTCGCGGGTTTGTTGTTTATTTGTTTGTTTTTTGGGCTAAATGATGTTATTTGATGTAGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATAAGAACGATACTTCATTCACTTGTATCTAAGTGGAAACCCCATTTACCTGGTATTTATTTTCCCCTTTCATTTTATTTTTCTATTTGATACCATGAGAAGTGGGATGGAAAGTGGATTTTGTTCTGGATGCATGAGTACATAATAATTATTGATTTTAGGGTCCTTTAATCGGTTCATTTTCTCCCTTTTGGTGGGTTTTGATATCTTAACACATTCAAAAGTTCAGTGTTCGTATTGATATGGTTGGACTCAATTTAGGATGGATTTGAACCAATCCTTACTTTAAATAGCATTTTAGCTTTTCGTCTTGCATGTAAGTTGCAAGTGTAACTGTTTAAGCATTGTGTTTTTAATCATAATTTAAGGTAGAATTTAGAAGGAATTTCTTGAGGAATGGGTTTTATGGGTCAGTTGAAATTTTTTCTTGAAAACAATGTCTTGCAGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGGTAATACTTCAAACAAATATGTCAACTACCATTTATACGACTCTTTTATGATTTTGGCTTTATGGGATTTGATTGAGACACTTAAATGGAATGTACAGAGATCTGTCACCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGTCCGTATCACAGAATAAAATCGAATAGAACTATGATGCCCTTTTCCCAGCTATATCCTCGAGGAATTGCATAAAATTGTGATCAATTTTTTGAGCATGTTGGTACATGCTGCACCTGTTCATCCTCTAACTTCTCTTCTAGTTTTGTATGAGTTGATTCATATTGCAATTTTTGTTGCTGCTCATGTATTGTTTTTCTTCCCTGCTGCAATTAATGCAACTTGCAACAATTCATAATGTGTAAACCAATATTTTGTTCGGGAGCACGTTAATGTATTGTCTATTATGTGTGCCAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGTGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAGTAAGATGGGATAACCTCCCTCTTTTTTTCGTATTTACTGTTTCCATCTTTTGACAGGAGTGAAATGGATTCAATTATTATGTAGTGAGAGGTTTAATCACGTATTTTTGTTATACTTTAATGTCACCAATTGCTGCCATATTAGTTTATTGTTCCTTAAATAGTTGAGGATTCATTACTTGTTATTTATTATTTATGGGTAGAGCTTTGAGAATGTGAGCATTTTGAAGCCTCGAGGAGGGTGTATAGATAAGAGTCATGCTTTACTTTTTAATGAAATGTCTGTCAATTGCAACATATTTTGTGCGATTGTGGTGAACGACCAGGGGGCACTGCTCTTCACTCACTTTTGAATTGTTCCTTAATACGACTGGCTGTTTCTCTGTAGATGGATGATGGTTACCGTTTGATTAATTAGACTAAGGTCTCCTCATAGTGGAATGTGGTTTGAATATTAATAATCTTCCTAAGAGAATATGACACTCCTTTCAAAATGATTATGAAGGTTCATGAGGGTCCAAGATGCTTTATAGCAGTATTTCTTATATTAAAAAAGGTTCAAATGTATGCAGACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTTGCTCTAATCCTCTACAGTTTCAGCTGCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGTTGGTTTCATCTTTATATTTTCCCTCTCTAAATGTTTATCAGTTGCTAAGATTTTTAGAACCATTAACTGAACAGGAACAAGGGATTGCGGCTCAAGTAGTTCATGTTGTTATTGCTGGGAATTCCGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGGTAGAGGCTTCACAAACTATGTTTCTGATATATCCTGTTTCAATATGTTTAAATATGTTGCCGAGATCAGTTTATTTTCTTTAACGAATGTAGTATCTTTTGTTGTCATTACCTACGAATGAAAGAATTGAAAGGCTGGTCTTCTTGAACTTTTACAAGAAGCCTTGAATGGAACAATTCGTTTTATGGTTTTTCTTGATTAATTTACTGGAGTTCTTATTTAACATGTAATTTTCTAATTTCGAGAAGAAAATGAAAGAAAACAAAAAGAAAGGAAACGTAATCGTTTTCTTTGGAATACTATGAAGGGCAGTCTATGATAAAACGTAATCACATAAATCATGTAATTTTCTAATTTCGAGAAGAAAATGAAAGAAAGGTTAACGTGACGTTTGTTAGATAAGGATAAGGGTAAATTTAGAGCTATCCCAGTATTCAATTAATTTCTGTGCATTCCCTAGTAATGTCAGGGATGCTAGGCTTTTTGTTGATGCATGCATGATGTATTTCTGCAGCACTTATCTGCTAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGTTAGATATCCTGTTGAATCAGGTTCTTATCCAGTTGATTCTCAGTCCAACTTTTTATCAAATTCAAATTTATATTCTTATTTCCTTTAATCCAATTACCTGATTGTAAATCCATTATCCTTTTCATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGGTTACAGCCGAAACTCCTGCTTTTTATCCCTTGTTTGATTTGTCCATAATGTCATTTTCGTTGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGCAAGTCAATAATGTCATCCTGATAGGGTAATTGGCTGTTTAGTGTGAACTTGAATCAGCCACACTTCAATTGGTAGTCCTTTGGTTTCAGGTTTCTTGGAACATCAGGCCAGAATGTGGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGAGCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTTGGTACATGTTACATTCTTATTTGTGTTGGTGGATAAGCCATTGAAACAATCTCTTCTTGATTTTATAAAAAAATTTGCAATAATATAAAACTTTTCATAAGTAGTATTTATATTGTTCGAGCCTTACAGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTATATTTTCACATAAACTCTCTATATTAATTAGTATAATTGCTGATTTACTTCTCCTAAAGGATGTATGAACAAGGTAATTTATTGTCATGTATATTACTTTTTGAAAATGCAGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGGTTGCCGTAATGGTAATTTTCTTTTACTGATTCACCTTTACCCAATATTTATACTTGTTTACCGCATCTCCCCTAGTCATTACTGTTGGAGTGAAAAGTTGTTAGATCAAAGGTTGAAGCATGTTGTTTATATAGAGAATTACCAATACAAATATTTATTCTCAACAAATTGGCCCTCATTTGTTTGTCGAACTTTTAATGTTCATGCAACCAAATGATCTGCATCGTCGTCGTCTTTTTCCTTGGAAACTTCATTAAAGTCGAGAGAGGCTATGGATATTTTTTGTGTGTTTTTTACTGGCCCCCCTCCATCTTCTGTATCTCAACTATAATTGATTCCAAAGATAATGTTGTCCTCATCCCCTTTGCAGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGATTATTATGTCAAAAGAAACATTAAAGCGATCGATCGAGAATCTGGTTTGGAATTCAGTTGTTTATGTATGGTGTAAAAAGGGTTTGCAGTGAAATGCAGAATGATCGCCATTTTCTCAACAGTTCATCTTCTGGGGAGGAGGATGATAGTGCTAAATTAATATTTTTTTTAGTAAGGATTAGTGTGAGTTTAGTCCCATTTTTTTTTAAAAAAAATTGTGTTTAAATAGGTCTG

mRNA sequence

CCAATTTTTAAGCGAGGGAATTCTACGGTTCTACCCTACCGATTGAGGTTCGTCGGAGTAAAATCATTCTCTTCCTCGCCATGGAAATCGATTCACAGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATAAGAACGATACTTCATTCACTTGTATCTAAGTGGAAACCCCATTTACCTGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGAGATCTGTCACCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGTGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTTGCTCTAATCCTCTACAGTTTCAGCTGCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCGGCTCAAGTAGTTCATGTTGTTATTGCTGGGAATTCCGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGCACTTATCTGCTAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGTTAGATATCCTGTTGAATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGCCAGAATGTGGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGAGCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGGTTGCCGTAATGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGATTATTATGTCAAAAGAAACATTAAAGCGATCGATCGAGAATCTGGTTTGGAATTCAGTTGTTTATGTATGGTGTAAAAAGGGTTTGCAGTGAAATGCAGAATGATCGCCATTTTCTCAACAGTTCATCTTCTGGGGAGGAGGATGATAGTGCTAAATTAATATTTTTTTTAGTAAGGATTAGTGTGAGTTTAGTCCCATTTTTTTTTAAAAAAAATTGTGTTTAAATAGGTCTG

Coding sequence (CDS)

ATGGAAATCGATTCACAGAAGAATCTCCAGCGCAAGCAGTGTACCTATGAAATATTGGATGAGCAGTACAAGATTCAGAAGGAGACGTACAAGGGCCAGCAATACAGTCATATTTACTTTGTTCGACTCCACTTGATAAGAACGATACTTCATTCACTTGTATCTAAGTGGAAACCCCATTTACCTGTTCGTACTGTATTGGAGTTGGAGGAAGGCAAGGAATGTGTCATCGTTGGAACCCTCTACAAGCACATGAAACTTAAACCTACCATTCTGGACGAGTATTCAAAGGAGAGATCTGTCACCCCACTTGTTAAGCCACACAACTTTATGCATCCAGATGATTATCTAGTCTTGGAAGATGACAGTGGGAGAGTAAAGCTTTCTGGGGCTGTGCTTTTACCTTCTGTATATGCTACAGGGATTATTGTTGCATTGCATGGAAAGGAAACCTGTGTTGGTGACTTTTTTGTTGATGACATCCTAGAAGCTGGCTTGCCACCTCAGATAGAGCGGCCTCTCATACCAAACGAAGATAAATACGTGGTTTTTGTGTCGGGCCTAAGTATTGGGAGCAGTTGCTCTAATCCTCTACAGTTTCAGCTGCTTGTTGATCATATAACAGGACATTTAGGGGATGAGAAGGAACAAGGGATTGCGGCTCAAGTAGTTCATGTTGTTATTGCTGGGAATTCCGTTGAAATTCCTCGTGGACTTTTAAATGGGCAGCACTTATCTGCTAAGGACCAAACGAAGCTGACAGAACCGCTTAAAGAGTTAGATATCCTGTTGAATCAGCTTGCTGCAGGTTTATCTGTGGACATCATGCCGGGTCCCAGTGACCCAGCCAATTTTTCGTTACCCCAGCAGCCTTTGCACAGATGCCTTTTTCCTGGATCGTCAGCTTATAACACTTTCAGATCTTGCACTAACCCTCATTGTTTTGAGCTTGATAATTTCAGGTTTCTTGGAACATCAGGCCAGAATGTGGACGATCTTGACAAGTATTCCGAAGCTAAAGATAAACTTGAATTTATGGAGAGGAGCTTGAGATGGAGGCATCTAGCACCAACTGCTCCAAATACTCTTGGTTGTTACCCTTTCACCGATCGAGATCCTTTCCTGATTGAAAGCTGTCCTCATGTCTATTTTATTGGCAATCAGGACAAGTTTGATACTCGCTTAATAAAGGGTTCTGAAGGACAGATGGTAAGACTCATCGCAATTCCAAGATTTTGCGAGAATGGGGTTGCCGTAATGCTTAATTTGAGAAATCTCGACTGCCACGTTCTGAGTTTCGAGACTGAATTCAGCTGA

Protein sequence

MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPHLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLLNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVMLNLRNLDCHVLSFETEFS

Homology

[Close]

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot
Match: O48520 (DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2 SV=2)

HSP 1 Score: 718.0 bits (1852), Expect = 6.5e-206
Identity = 331/438 (75.57%), Postives = 390/438 (89.04%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDS+K  +RKQ  Y  LDE+++IQKE Y+GQQYS IYF RLHL+RT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPV  VL LE+GKEC+IVGTL+KHMKLKP +LDEYSKERSVTPLVKPHNFMHPDD L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           D+SGRVKL+G+ L P++Y TG++VALHGKET  G+FFV+D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVV +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQ+VHVVIAGNS E PR L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+SVDIMPG +DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ER+LRWRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           +NLRNL+CH LSF T+ +
Sbjct: 421 VNLRNLECHTLSFSTQIN 438

[Close]

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot
Match: Q9LRE5 (DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=POLD2 PE=2 SV=1)

HSP 1 Score: 666.0 bits (1717), Expect = 2.9e-190
Identity = 309/429 (72.03%), Postives = 367/429 (85.55%), Query Frame = 0


Query: 9   LQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPHLPVRTVLE 68
           ++RKQ  Y  LDE+Y IQ E Y+GQQYSHIYF RLH +R +LH+LV  WKPHLPV TVL 
Sbjct: 1   MERKQAEYSNLDERYAIQGEKYQGQQYSHIYFTRLHHMRNLLHALVPSWKPHLPVTTVLG 60

Query: 69  LEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKL 128
           LEEGK+C+IVGTLYKHMKLKP+ILDEYSKERS  PLVKPHNFMHPDD+L+LED+SGRV L
Sbjct: 61  LEEGKDCIIVGTLYKHMKLKPSILDEYSKERSAIPLVKPHNFMHPDDHLILEDESGRVTL 120

Query: 129 SGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGL 188
           +GA+  P+ Y TG+++ALHGKET  G+F V+DILEAG+PPQI  P I NEDKYVVFVSGL
Sbjct: 121 AGAI-PPAAYVTGVVIALHGKETSAGNFLVEDILEAGIPPQITLPSI-NEDKYVVFVSGL 180

Query: 189 SIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLLNGQHLSAK 248
           SIGS   NPLQFQLL+DHITGHLGDE EQ IA+ +V VV+AGNSV I     NGQ +++K
Sbjct: 181 SIGSEKFNPLQFQLLIDHITGHLGDENEQSIASNIVRVVVAGNSVHISPRFFNGQAVASK 240

Query: 249 DQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFRS 308
           DQ+++ EP+KELDI+L QL A L VD+MPG +DPANFSLPQQPLHRCLF G++ YNTF S
Sbjct: 241 DQSRIAEPIKELDIMLTQLVASLPVDMMPGSNDPANFSLPQQPLHRCLFAGAATYNTFSS 300

Query: 309 CTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAPNTLGCYPF 368
           C+NPH FELD+ RF+GTSGQN+DDL KYS+AKDKLEF+ER+LRWRHLAPTAPN+LGCYP+
Sbjct: 301 CSNPHQFELDSVRFIGTSGQNIDDLYKYSDAKDKLEFVERTLRWRHLAPTAPNSLGCYPY 360

Query: 369 TDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVMLNLRNLDC 428
           TD+DPFL+ESCPHVYF+GNQDK++T+L++G E Q VRLI IPRFC++GVAVMLNLRNL+C
Sbjct: 361 TDKDPFLVESCPHVYFVGNQDKYETQLLQGLEKQKVRLICIPRFCDSGVAVMLNLRNLEC 420

Query: 429 HVLSFETEF 438
             LSF T F
Sbjct: 421 STLSFSTSF 427

[Close]

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot
Match: O93610 (DNA polymerase delta subunit 2 OS=Xenopus laevis OX=8355 GN=pold2 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 2.1e-95
Identity = 176/417 (42.21%), Postives = 264/417 (63.31%), Query Frame = 0


Query: 23  YKIQKETYKGQQYSHIYFVRLHLIRTIL-HSLVSKWKPHLPVRTVLELEEGKECVIVGTL 82
           +++ + T+  +QY+HIY  RL  +R +L  S   +W   + VR + EL+ G++C ++GTL
Sbjct: 39  FRLGERTFT-RQYAHIYATRLEQMRPLLIKSAKQRWGDDIAVRKLCELQGGEKCCVIGTL 98

Query: 83  YKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVLLPSVYATG 142
           +K M+L+P+IL E S+E ++ P      ++   D L+LED+  R+KL GA  +  +  TG
Sbjct: 99  FKSMELQPSILREISEEHNLLPQPARQKYISDSDELILEDELQRIKLEGATDVQQL-VTG 158

Query: 143 IIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDKYVVFVSGLSIGSSCSNPLQ-F 202
            ++A+ G E   G F V+D     LP Q   P + +ED++V+  SGL +G    + L   
Sbjct: 159 AVLAVLGAEEDAGKFVVEDFCLTSLPVQSPLPRL-SEDRFVLLTSGLGLGGGSGDSLMGL 218

Query: 203 QLLVDHITGHLGDEKEQGIAAQVVHVVIAGN----SVEIPRGLLNGQHLSAKDQTKLTEP 262
           QLL+D +TG  G E++QG AA++  V++AGN    + +    L   ++LS K Q    E 
Sbjct: 219 QLLLDLVTGQAGAEEDQGCAARISRVILAGNLLSENTQGKDSLNKAKYLSKKTQAASVEA 278

Query: 263 LKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFE 322
           +K LD +L Q++  +SVD+MPG  DP N+ LPQQPLHRC+FP S+ Y+T +  TNP+  E
Sbjct: 279 VKMLDEILLQMSGSVSVDVMPGAFDPTNYILPQQPLHRCMFPQSALYSTLQLVTNPYEAE 338

Query: 323 LDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAPNTLGCYPFTDRDPFLI 382
           +D  RFLGTSGQN+ D+ KYS  +D L+ +E +L+  HL PTAP+TLGCYPF   DPF++
Sbjct: 339 IDGVRFLGTSGQNIGDIYKYSSMQDYLDILEWTLQVGHLCPTAPDTLGCYPFYKSDPFIL 398

Query: 383 ESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVMLNLRNLDCHVLSF 434
           ++CPHVYF G+  KF  + + G+EGQ V L+ +P FC    A ++NLR L C  +SF
Sbjct: 399 QNCPHVYFCGSAPKFSCKEVTGAEGQRVLLLTVPEFCSTQTACLVNLRTLQCQPISF 452

[Close]

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot
Match: O35654 (DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2)

HSP 1 Score: 348.6 bits (893), Expect = 1.0e-94
Identity = 185/426 (43.43%), Postives = 269/426 (63.15%), Query Frame = 0


Query: 15  TYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSK-WKPHLPVRTVLELEEGK 74
           TY    + +++ + ++  +QY+HIY  RL  +R  L S   + W   + V+ + EL+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-NRQYAHIYATRLIQMRPFLVSRAQQHWGSRVEVKKLCELQPGE 90

Query: 75  ECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVL 134
           +C +VGTL+K M L+P+IL E S+E ++ P      ++HPDD LVLED+  R+KL G + 
Sbjct: 91  QCCVVGTLFKAMSLQPSILREISEEHNLVPQPPRSKYIHPDDELVLEDELQRIKLKGTID 150

Query: 135 LPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIP-NEDKYVVFVSGLSIGS 194
           + S   TG ++A+ G     G F V+D   A L PQ  +P+ P + D++V+ VSGL +G 
Sbjct: 151 V-SKLVTGTVLAVLGSAKDDGRFQVEDHCFADLAPQ--KPVPPLDTDRFVLLVSGLGLGG 210

Query: 195 SCSNP-LQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGN----SVEIPRGLLNGQHLSA 254
                 L  QLLVD +TG LGDE EQ  AA V  V++AGN    + +    +   ++L+ 
Sbjct: 211 GGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTK 270

Query: 255 KDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFR 314
           K Q    E +K LD +L QL+A + VD+MPG  DP N++LPQQPLH C+FP ++AY+T +
Sbjct: 271 KTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQ 330

Query: 315 SCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAPNTLGCYP 374
             TNP+   +D  RFLGTSGQNV D+ +YS  +D LE +E +LR RH++PTAP+TLGCYP
Sbjct: 331 LVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYP 390

Query: 375 FTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVMLNLRNLD 434
           F   DPF+   CPHVYF GN   F +++I+G E Q+V L+A+P F     A ++NLR+L 
Sbjct: 391 FYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQVVLLVAVPDFSSTQTACLVNLRSLA 450

[Close]

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot
Match: P49004 (DNA polymerase delta subunit 2 OS=Bos taurus OX=9913 GN=POLD2 PE=1 SV=2)

HSP 1 Score: 346.7 bits (888), Expect = 3.9e-94
Identity = 184/426 (43.19%), Postives = 268/426 (62.91%), Query Frame = 0


Query: 15  TYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLV-SKWKPHLPVRTVLELEEGK 74
           TY    + +++ + ++  +QY+HIY  RL  +R  L S    +W   + V+ + EL+ G+
Sbjct: 31  TYTNSSQPFRLGERSF-SRQYAHIYATRLIQMRPFLVSRAQQRWGSGVLVKKLCELQPGE 90

Query: 75  ECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLEDDSGRVKLSGAVL 134
           +C +VGTL+K M L+P+IL E S+E ++ P      ++HPDD L+LED+  R+KL G + 
Sbjct: 91  KCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELILEDELQRIKLEGTID 150

Query: 135 LPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIP-NEDKYVVFVSGLSIGS 194
           + S   TG ++A+ G     G F V+D   AGL PQ  +P  P + D++V+ VSGL +G 
Sbjct: 151 V-SKLVTGTVLAVLGSAGDDGKFLVEDHCFAGLAPQ--KPACPLDTDRFVLLVSGLGLGG 210

Query: 195 SCSNP-LQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGN----SVEIPRGLLNGQHLSA 254
                 L  QLLVD +TG LGDE EQ  AA V  V++AGN    + +    +   ++L+ 
Sbjct: 211 GGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTK 270

Query: 255 KDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGSSAYNTFR 314
           K Q    E +K LD +L QL+A + VD+MPG  DP N++LPQQPLH C+FP ++AY+T +
Sbjct: 271 KTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQ 330

Query: 315 SCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAPNTLGCYP 374
             TNP+   +D  RFLGTSGQNV D+ +YS  +D LE +E +L+ RH++PTAP+TLGCYP
Sbjct: 331 LVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLQVRHISPTAPDTLGCYP 390

Query: 375 FTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVMLNLRNLD 434
           F   DPF+   CPHVYF GN   F +++I+G E Q V L+A+P F     A ++NLR+L 
Sbjct: 391 FYKTDPFIFPECPHVYFCGNTPSFGSKIIQGPEDQTVLLVAVPDFSTTQTACLVNLRSLA 450

[Close]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL
Match: A0A6J1J5X9 (DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 PE=3 SV=1)

HSP 1 Score: 902.5 bits (2331), Expect = 6.9e-259
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCHVLSFETEFS
Sbjct: 421 LNLRNLDCHVLSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL
Match: A0A6J1F213 (DNA polymerase delta small subunit OS=Cucurbita moschata OX=3662 GN=LOC111441443 PE=3 SV=1)

HSP 1 Score: 886.7 bits (2290), Expect = 3.9e-254
Identity = 429/438 (97.95%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQC+YEILDEQYKIQKETYKGQQYSHIYFVRLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCSYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKET VGDFFVDDILEAGLPPQIERP+IPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETGVGDFFVDDILEAGLPPQIERPVIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN DDLDKYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCH+LSFETEFS
Sbjct: 421 LNLRNLDCHILSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL
Match: A0A1S3B7Y0 (DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 SV=1)

HSP 1 Score: 822.8 bits (2124), Expect = 6.9e-235
Identity = 396/438 (90.41%), Postives = 412/438 (94.06%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC YEI DEQYKIQKETYKGQQYSHIYF RLHL+RTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDL+KYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLIAIPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNL+CH LSF TEFS
Sbjct: 423 LNLRNLECHTLSFGTEFS 440

[Close]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL
Match: A0A0A0LF21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1)

HSP 1 Score: 820.8 bits (2119), Expect = 2.6e-234
Identity = 394/438 (89.95%), Postives = 413/438 (94.29%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDS  N+ RKQCTYE+ DEQYKIQKETYKGQQYSHIYF RLHL+RTILHSLVS WKPH
Sbjct: 1   MEIDSLTNVHRKQCTYELSDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 61  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 121 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+L
Sbjct: 181 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDL+KYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQ+KFDTRL+KG+EGQMVRLIAIPRFCE G+AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQEKFDTRLMKGAEGQMVRLIAIPRFCETGIAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNL+CH LS  TEFS
Sbjct: 421 LNLRNLECHTLSLGTEFS 438

[Close]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL
Match: A0A5D3DQ54 (DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G005420 PE=3 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 2.5e-229
Identity = 396/475 (83.37%), Postives = 412/475 (86.74%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDS KN+ RKQC YEI DEQYKIQKETYKGQQYSHIYF RLHL+RTILHSLVS WKPH
Sbjct: 3   MEIDSPKNVHRKQCNYEISDEQYKIQKETYKGQQYSHIYFARLHLMRTILHSLVSNWKPH 62

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPV TVL LEEGKECVIVGT+YKHMKLKPTILDEYSKERS  PLVKPHNFMHPDD+LVLE
Sbjct: 63  LPVSTVLGLEEGKECVIVGTVYKHMKLKPTILDEYSKERSAIPLVKPHNFMHPDDHLVLE 122

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           D+SGRVKLSG VLLPSVY TGI++ALHGKET VGDF V DILEA LPPQIERPLI +EDK
Sbjct: 123 DESGRVKLSGDVLLPSVYVTGIVLALHGKETSVGDFLVLDILEADLPPQIERPLISSEDK 182

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YV+FVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVI GNSVEIPRG+L
Sbjct: 183 YVIFVSGLSIGSSISNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVICGNSVEIPRGIL 242

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDI LNQLAAGL VDIMPG SDPANFSLPQQPLHRCLFPGS
Sbjct: 243 NGQHLSAKDQTKLTEPLKELDIQLNQLAAGLPVDIMPGSSDPANFSLPQQPLHRCLFPGS 302

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDN RFLGTSGQNVDDL+KYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 303 SAYNTFRSCTNPHCFELDNLRFLGTSGQNVDDLEKYSEAKDKLEFMERTLRWRHLAPTAP 362

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKG+EGQMVRLIAIPRFCE G+AVM
Sbjct: 363 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGAEGQMVRLIAIPRFCETGIAVM 422

Query: 421 -------------------------------------LNLRNLDCHVLSFETEFS 439
                                                LNLRNL+CH LSF TEFS
Sbjct: 423 HLYCHVATYSLLLTCNFAGLAIRFHSKDNSLPFLPLQLNLRNLECHTLSFGTEFS 477

[Close]

BLAST of CmaCh14G004180 vs. NCBI nr
Match: XP_022982949.1 (DNA polymerase delta small subunit [Cucurbita maxima])

HSP 1 Score: 902.5 bits (2331), Expect = 1.4e-258
Identity = 438/438 (100.00%), Postives = 438/438 (100.00%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCHVLSFETEFS
Sbjct: 421 LNLRNLDCHVLSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. NCBI nr
Match: KAG6580807.1 (DNA polymerase delta small subunit, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 892.9 bits (2306), Expect = 1.1e-255
Identity = 432/438 (98.63%), Postives = 436/438 (99.54%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQC+YEILDEQYKIQKETYKGQQYSHIYFVRLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCSYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN DDLDKYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCHVLSFETEFS
Sbjct: 421 LNLRNLDCHVLSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. NCBI nr
Match: XP_023527988.1 (DNA polymerase delta small subunit [Cucurbita pepo subsp. pepo])

HSP 1 Score: 888.6 bits (2295), Expect = 2.1e-254
Identity = 430/438 (98.17%), Postives = 434/438 (99.09%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNL RKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLLRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSS SNPLQFQLLVDHITGHLGDE+EQGIAAQ+VHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEEEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN DDLDKYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENG AVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGTAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCHVLSFETEFS
Sbjct: 421 LNLRNLDCHVLSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. NCBI nr
Match: XP_022934202.1 (DNA polymerase delta small subunit [Cucurbita moschata])

HSP 1 Score: 886.7 bits (2290), Expect = 8.0e-254
Identity = 429/438 (97.95%), Postives = 435/438 (99.32%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQC+YEILDEQYKIQKETYKGQQYSHIYFVRLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCSYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKET VGDFFVDDILEAGLPPQIERP+IPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETGVGDFFVDDILEAGLPPQIERPVIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           SAYNTFRSCTNPHCFELDNFRFLGTSGQN DDLDKYSEAKDKLEFMER+LRWRHLAPTAP
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNADDLDKYSEAKDKLEFMERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM
Sbjct: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           LNLRNLDCH+LSFETEFS
Sbjct: 421 LNLRNLDCHILSFETEFS 438

[Close]

BLAST of CmaCh14G004180 vs. NCBI nr
Match: KAG7017557.1 (DNA polymerase delta small subunit [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 885.2 bits (2286), Expect = 2.3e-253
Identity = 432/447 (96.64%), Postives = 436/447 (97.54%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDSQKNLQRKQC+YEILDEQYKIQKETYKGQQYSHIYFVRLHL+RTILHSLVSKWKPH
Sbjct: 1   MEIDSQKNLQRKQCSYEILDEQYKIQKETYKGQQYSHIYFVRLHLMRTILHSLVSKWKPH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE
Sbjct: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK
Sbjct: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVVFVSGLSIGSS SNPLQFQLLVDHITGHLGDEKEQGIAAQ+VHVVIAGNSVEIPRGLL
Sbjct: 181 YVVFVSGLSIGSSSSNPLQFQLLVDHITGHLGDEKEQGIAAQIVHVVIAGNSVEIPRGLL 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS
Sbjct: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFR---------FLGTSGQNVDDLDKYSEAKDKLEFMERSLR 360
           SAYNTFRSCTNPHCFELDNFR         FLGTSGQN DDLDKYSEAKDKLEFMER+LR
Sbjct: 301 SAYNTFRSCTNPHCFELDNFRQVNNVILIGFLGTSGQNADDLDKYSEAKDKLEFMERTLR 360

Query: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPR 420
           WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPR
Sbjct: 361 WRHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPR 420

Query: 421 FCENGVAVMLNLRNLDCHVLSFETEFS 439
           FCENGVAVMLNLRNLDCHVLSFETEFS
Sbjct: 421 FCENGVAVMLNLRNLDCHVLSFETEFS 447

[Close]

BLAST of CmaCh14G004180 vs. TAIR 10
Match: AT2G42120.2 (DNA polymerase delta small subunit )

HSP 1 Score: 718.0 bits (1852), Expect = 4.6e-207
Identity = 331/438 (75.57%), Postives = 390/438 (89.04%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEILDEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKPH 60
           MEIDS+K  +RKQ  Y  LDE+++IQKE Y+GQQYS IYF RLHL+RT+L+SL   WK H
Sbjct: 1   MEIDSEKIHERKQSDYNSLDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKSH 60

Query: 61  LPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVLE 120
           LPV  VL LE+GKEC+IVGTL+KHMKLKP +LDEYSKERSVTPLVKPHNFMHPDD L+LE
Sbjct: 61  LPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLILE 120

Query: 121 DDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNEDK 180
           D+SGRVKL+G+ L P++Y TG++VALHGKET  G+FFV+D+LEAGLPPQIERP+   EDK
Sbjct: 121 DESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQEDK 180

Query: 181 YVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGLL 240
           YVV +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQ+VHVVIAGNS E PR L+
Sbjct: 181 YVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKLI 240

Query: 241 NGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPGS 300
           NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+SVDIMPG +DPANF+LPQQPL+RCLFPGS
Sbjct: 241 NGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPGS 300

Query: 301 SAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTAP 360
           S YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ER+LRWRHLAPTAP
Sbjct: 301 SPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTAP 360

Query: 361 NTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAVM 420
           NTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV 
Sbjct: 361 NTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAVA 420

Query: 421 LNLRNLDCHVLSFETEFS 439
           +NLRNL+CH LSF T+ +
Sbjct: 421 VNLRNLECHTLSFSTQIN 438

[Close]

BLAST of CmaCh14G004180 vs. TAIR 10
Match: AT2G42120.1 (DNA polymerase delta small subunit )

HSP 1 Score: 713.4 bits (1840), Expect = 1.1e-205
Identity = 331/439 (75.40%), Postives = 390/439 (88.84%), Query Frame = 0


Query: 1   MEIDSQKNLQRKQCTYEIL-DEQYKIQKETYKGQQYSHIYFVRLHLIRTILHSLVSKWKP 60
           MEIDS+K  +RKQ  Y  L DE+++IQKE Y+GQQYS IYF RLHL+RT+L+SL   WK 
Sbjct: 1   MEIDSEKIHERKQSDYNSLQDERFEIQKEMYRGQQYSQIYFARLHLMRTLLYSLAPTWKS 60

Query: 61  HLPVRTVLELEEGKECVIVGTLYKHMKLKPTILDEYSKERSVTPLVKPHNFMHPDDYLVL 120
           HLPV  VL LE+GKEC+IVGTL+KHMKLKP +LDEYSKERSVTPLVKPHNFMHPDD L+L
Sbjct: 61  HLPVCKVLGLEKGKECIIVGTLFKHMKLKPCVLDEYSKERSVTPLVKPHNFMHPDDNLIL 120

Query: 121 EDDSGRVKLSGAVLLPSVYATGIIVALHGKETCVGDFFVDDILEAGLPPQIERPLIPNED 180
           ED+SGRVKL+G+ L P++Y TG++VALHGKET  G+FFV+D+LEAGLPPQIERP+   ED
Sbjct: 121 EDESGRVKLAGSALSPAIYVTGVVVALHGKETNAGEFFVEDVLEAGLPPQIERPIDLQED 180

Query: 181 KYVVFVSGLSIGSSCSNPLQFQLLVDHITGHLGDEKEQGIAAQVVHVVIAGNSVEIPRGL 240
           KYVV +SGL IGS  +NPLQFQLLVDHITGHLGDE+EQG+AAQ+VHVVIAGNS E PR L
Sbjct: 181 KYVVLLSGLCIGSKSANPLQFQLLVDHITGHLGDEEEQGLAAQIVHVVIAGNSFEFPRKL 240

Query: 241 LNGQHLSAKDQTKLTEPLKELDILLNQLAAGLSVDIMPGPSDPANFSLPQQPLHRCLFPG 300
           +NGQ+L++KDQ+ L EP+KELDI+L+Q+AAG+SVDIMPG +DPANF+LPQQPL+RCLFPG
Sbjct: 241 INGQNLASKDQSTLYEPIKELDIMLSQIAAGVSVDIMPGTNDPANFALPQQPLNRCLFPG 300

Query: 301 SSAYNTFRSCTNPHCFELDNFRFLGTSGQNVDDLDKYSEAKDKLEFMERSLRWRHLAPTA 360
           SS YNTFRSCTNPH F++DN RFLGTSGQN+DDL KYSEAK KL+F+ER+LRWRHLAPTA
Sbjct: 301 SSPYNTFRSCTNPHSFDVDNIRFLGTSGQNIDDLGKYSEAKSKLDFVERTLRWRHLAPTA 360

Query: 361 PNTLGCYPFTDRDPFLIESCPHVYFIGNQDKFDTRLIKGSEGQMVRLIAIPRFCENGVAV 420
           PNTLGCYPFTDRDPFLIE+CPHVYF+GNQDK+D RLIKGSEGQ+VRLI IP+FCE G+AV
Sbjct: 361 PNTLGCYPFTDRDPFLIETCPHVYFVGNQDKYDNRLIKGSEGQLVRLICIPKFCETGIAV 420

Query: 421 MLNLRNLDCHVLSFETEFS 439
            +NLRNL+CH LSF T+ +
Sbjct: 421 AVNLRNLECHTLSFSTQIN 439

The following BLAST results are available for this feature:

BLAST of CmaCh14G004180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48520	6.5e-206	75.57	DNA polymerase delta small subunit OS=Arabidopsis thaliana OX=3702 GN=POLD2 PE=2...	[more]
Q9LRE5	2.9e-190	72.03	DNA polymerase delta small subunit OS=Oryza sativa subsp. japonica OX=39947 GN=P...	[more]
O93610	2.1e-95	42.21	DNA polymerase delta subunit 2 OS=Xenopus laevis OX=8355 GN=pold2 PE=2 SV=1	[more]
O35654	1.0e-94	43.43	DNA polymerase delta subunit 2 OS=Mus musculus OX=10090 GN=Pold2 PE=1 SV=2	[more]
P49004	3.9e-94	43.19	DNA polymerase delta subunit 2 OS=Bos taurus OX=9913 GN=POLD2 PE=1 SV=2	[more]

BLAST of CmaCh14G004180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5X9	6.9e-259	100.00	DNA polymerase delta small subunit OS=Cucurbita maxima OX=3661 GN=LOC111481642 P...	[more]
A0A6J1F213	3.9e-254	97.95	DNA polymerase delta small subunit OS=Cucurbita moschata OX=3662 GN=LOC111441443...	[more]
A0A1S3B7Y0	6.9e-235	90.41	DNA polymerase delta small subunit OS=Cucumis melo OX=3656 GN=LOC103486765 PE=3 ...	[more]
A0A0A0LF21	2.6e-234	89.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G807320 PE=3 SV=1	[more]
A0A5D3DQ54	2.5e-229	83.37	DNA polymerase delta small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]

BLAST of CmaCh14G004180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022982949.1	1.4e-258	100.00	DNA polymerase delta small subunit [Cucurbita maxima]	[more]
KAG6580807.1	1.1e-255	98.63	DNA polymerase delta small subunit, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_023527988.1	2.1e-254	98.17	DNA polymerase delta small subunit [Cucurbita pepo subsp. pepo]	[more]
XP_022934202.1	8.0e-254	97.95	DNA polymerase delta small subunit [Cucurbita moschata]	[more]
KAG7017557.1	2.3e-253	96.64	DNA polymerase delta small subunit [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh14G004180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42120.2	4.6e-207	75.57	DNA polymerase delta small subunit	[more]
AT2G42120.1	1.1e-205	75.40	DNA polymerase delta small subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007185	DNA polymerase alpha/delta/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 182..393 e-value: 1.1E-48 score: 165.4
None	No IPR available	GENE3D	3.60.21.50		coord: 171..437 e-value: 1.1E-110 score: 371.6
None	No IPR available	GENE3D	2.40.50.430		coord: 41..164 e-value: 2.5E-34 score: 119.8
IPR040663	DNA polymerase delta subunit, OB-fold domain	PFAM	PF18018	DNA_pol_D_N	coord: 34..161 e-value: 5.9E-38 score: 129.9
IPR024826	DNA polymerase delta/II small subunit family	PANTHER	PTHR10416	DNA POLYMERASE DELTA SUBUNIT 2	coord: 5..434
IPR041863	DNA polymerase delta subunit 2, C-terminal domain	CDD	cd07387	MPP_PolD2_C	coord: 181..433 e-value: 2.57884E-144 score: 410.108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G004180.1	CmaCh14G004180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006271	DNA strand elongation involved in DNA replication
biological_process	GO:0006260	DNA replication
cellular_component	GO:0043625	delta DNA polymerase complex
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003677	DNA binding