CmaCh14G003740 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTCTAACACACTGTAAAACCTCGTTAAACCCCGGGGGAGTGGATTCGGTTCCAAACAAATCGAATCGATTCTTCTTCCAATGTCGAAGGCGAAGCTACGATCTTCACTTCTCGCCGTTCTGCGCTGCAATACAGCTCACTCAACCGCCATTAATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAACTTCCGTCTAATTGCATCTCACTCTCGCAACTTCCTTCCACCGCAGAATGCTTTCGGCTGTGGCGATCCTCTAGATGTGAATGTCTCAACAATCTCAGATTTCCCTCGAGGGTTTTTAGTTCTCGATCGGCAGAGGCGTCGGACCTGAAACTTAGGTGCTGGAATTGTGGCGCTGCGGCTCCAACGTCAGTGGTGTTTCTGGTGTGTGATTCTTGTCGGAGCATTCAGCCTTTGGACCAGTCGGTGGATTACTTTCAGATATTTGGCTTGTAAGTGTAAAGAAAAACAAGAATTTATTTTTCTTTCTTAACCTATTCTAATATTGTATTAGTAGCTGAGAGAATAACTAGATGATGGAATTTGATTATCAACTGATTATGGGAAGGGATGAAAGATTTGAACTTAGGGCTTGATGGGTCTGTTAAAATTCTTTTGGGTCCAAATAGAATGAAAAAAATTCTGATGCATCATCAATTACAAAGCTTCTCTTTCTCTTCATCTTCTGCTCTGTTCATATTGCCTCTGAGTACTCAAAGTCCAAGGAAACTTTGGCTTATTGTTTTTCAATTTCGAGAAAATTGATGTAATCAACCCGTCATGTTTCTTTCCTTGAACCTTCCGCCTCATTTACTGGAGGGCATATGGGATTCTTCTCTGACTCATTGCTAGTAGGTGGGAATTATTGAAATGATGTATAATTAGAATTCCTAAATCTTTTTCCAGGGAAAAGAAGTATGAAATTGGAGATGTCAATCTGGAGAGCCAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCAAAATCAGACGTCTGTCTCATTTCATCTTTGAGAAGTTTGGTAATCTTTTAGGCTCTAATTTTCCGTTTCTTGAGTTTTGTAGAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGCACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTGTAAGTATGCTGTCTACCTTATCATCGTTATTAATTTTTGCATCTTATTTGTGTTCTAAATGCCATGCTATCATCCATTTCTACCTCTAGTTACTTGAAGTCATGTGATGATTTAAGCTGGGTAATTGGAATGAAACATTCTCAGGAAATTGCTTCATACCAAGTTTCCTTAATAATAGTTCCTTTCCAACCCCATCCCACTTACACTATACATGGAAGTGATGGACCAACATGTGATGGTAACTAGAATTGAACCAATTGATTGAGCTTCTTCATAATAGTTGTGCTATGAAAGAATTGTTTGCAACTATTTTATATGATTTGGTATTTTGGAGTTAAAAACGTCTCGTGTTTGAGTTTTGATGCAGTGGGTGAAGGTAGTTTTCCCATTTTTGCCTAAAGGGGCCGAGCATATCACTCAATTATAGGCTCGGGCATTTGAGTCCTAGAACGGGCATGGGATTGTTTGGAAGGTCTAAATGGAAAGATGTGGAGACTGCACTCTTAAGCATAATCCTAAGTGATGTTTAGTGTTGGGATCAAATAACATTTCCTCATGTGAGATCCACATCGGTTTTGGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTTGACGCGTTTTAAAACTGAGGCTGACGGCGATACATAACGTGCAAAAGCGGACAATATATGCTAGTTGTGAACTTGGGCTGTTATGTCTCATGACAACCAAAGTTCTAGGAATTGTTTGCTTTCTTTATCGTCCCTACGCCAATTTTATTTCCTACTCGGACTCTTGAATAAACACTATTAGAAGAGAATATCGGTTTATTTCCTACTCGGACTCTGTAATTTGATGTTTGTGATCTTGGTTTATATGCATTATGTTTAAGGCATCTGCAATCTAGAATATCAGTTTTAATATTTTCTCGACTTCCTTTCTAATTTCCAAATTATCTACATTCTAAAATATTTGGTCTTCCCCTCCAATGAGCTTGTAAGATTATATTGCCATCCTTTTTCAGCTGAAGCTTGAGGGTTTAGATGTCAATGAAGAGGATACAATATCTGAACCAGAGTTGCTAAATGAGGTAACTAGTAAGAACCTAAGTTCGACCCAGTCTGAGTTATTCAGTTCTATGAGAGCTTTTGGCTTTCTGTTTGTAAAAGCATTTTATGAGATCATTTCATAGATCATGATAAGAAACTCTTTCAATGCTCAGACTGCAAGCTTATGTTCTACTTACAGTTGATTTATATAAAGTTACCAAACCCTTATTGCAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCGGGATCTCAGGAACTAAACCAGATTCAGTCACAGGTGCTACTCGGCACTTGTTCCGATTATTGTCTTTATTGTTTTTCTTCTTTATACATACGCAAGTTCGGGTGGGAGATTGGAGGAGTAAGTTGCATTTAAAGAATTAAAGAGCTTTTTATGATGACTTAACCTGTTTCATCTGCCTTCTTGTTCATCTAGATGCAAGAGAAACTAAATCATTGGTCTAACACATTTGCAAAAGCATTGCGAAACCGGAACTTCGACGATGCCATCTCGTCTATCCAGCGAATGACCTACTACGAGCGGGTGAAGGAAGAAATTACAAAGAAGCTTTAGTGCAGGAGGTATAATCCATGGAAGCACTAGGTGTAGAATTCAGTCTTTAACTTCCTCTTGAAATGATTGCTCATATCTCAGTTTTTTAGTACTTAAAAGTTCATAGATTGCTGGTTAATATTCTAGCTGTGAGTAAAAATTTCATATTTCATATCAGTTTTTGTGATTCTGATGTTGCCGAATGCTGCCAATCTCACTGTGTATCAATAAGGAGACGGAAATTAAGAATGTTAAGAAACAGCCTACATACAATAAATACTCATTAATCTGTCTTGGAGAAA AATTCTAACACACTGTAAAACCTCGTTAAACCCCGGGGGAGTGGATTCGGTTCCAAACAAATCGAATCGATTCTTCTTCCAATGTCGAAGGCGAAGCTACGATCTTCACTTCTCGCCGTTCTGCGCTGCAATACAGCTCACTCAACCGCCATTAATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAACTTCCGTCTAATTGCATCTCACTCTCGCAACTTCCTTCCACCGCAGAATGCTTTCGGCTGTGGCGATCCTCTAGATGTGAATGTCTCAACAATCTCAGATTTCCCTCGAGGGTTTTTAGTTCTCGATCGGCAGAGGCGTCGGACCTGAAACTTAGGTGCTGGAATTGTGGCGCTGCGGCTCCAACGTCAGTGGTGTTTCTGGTGTGTGATTCTTGTCGGAGCATTCAGCCTTTGGACCAGTCGGTGGATTACTTTCAGATATTTGGCTTGGAAAAGAAGTATGAAATTGGAGATGTCAATCTGGAGAGCCAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCAAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGCACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAGCTTGAGGGTTTAGATGTCAATGAAGAGGATACAATATCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCGGGATCTCAGGAACTAAACCAGATTCAGTCACAGATGCAAGAGAAACTAAATCATTGGTCTAACACATTTGCAAAAGCATTGCGAAACCGGAACTTCGACGATGCCATCTCGTCTATCCAGCGAATGACCTACTACGAGCGGGTGAAGGAAGAAATTACAAAGAAGCTTTAGTGCAGGAGGTATAATCCATGGAAGCACTAGGTGTAGAATTCAGTCTTTAACTTCCTCTTGAAATGATTGCTCATATCTCAGTTTTTTAGTACTTAAAAGTTCATAGATTGCTGGTTAATATTCTAGCTGTGAGTAAAAATTTCATATTTCATATCAGTTTTTGTGATTCTGATGTTGCCGAATGCTGCCAATCTCACTGTGTATCAATAAGGAGACGGAAATTAAGAATGTTAAGAAACAGCCTACATACAATAAATACTCATTAATCTGTCTTGGAGAAA ATGTCGAAGGCGAAGCTACGATCTTCACTTCTCGCCGTTCTGCGCTGCAATACAGCTCACTCAACCGCCATTAATTTCCCAAATGTTTCCAATTCGGCTCTATCATCCCAACTTCCGTCTAATTGCATCTCACTCTCGCAACTTCCTTCCACCGCAGAATGCTTTCGGCTGTGGCGATCCTCTAGATGTGAATGTCTCAACAATCTCAGATTTCCCTCGAGGGTTTTTAGTTCTCGATCGGCAGAGGCGTCGGACCTGAAACTTAGGTGCTGGAATTGTGGCGCTGCGGCTCCAACGTCAGTGGTGTTTCTGGTGTGTGATTCTTGTCGGAGCATTCAGCCTTTGGACCAGTCGGTGGATTACTTTCAGATATTTGGCTTGGAAAAGAAGTATGAAATTGGAGATGTCAATCTGGAGAGCCAGTATAAAGATTGGCAGAAGAAATTACATCCCGACTTAGTTCATTCAAAATCAGACAGAGAAAGAGAATATGCTGCTGAACAATCTGCTCGGGTGATCGATGCTTACCGCACTCTTAGTAAGCCATTGTCGAGAGCAATATATATTCTGAAGCTTGAGGGTTTAGATGTCAATGAAGAGGATACAATATCTGAACCAGAGTTGCTAAATGAGATTATGGAAATCAGGGAAGCTGTAGAAGATGCATCGGGATCTCAGGAACTAAACCAGATTCAGTCACAGATGCAAGAGAAACTAAATCATTGGTCTAACACATTTGCAAAAGCATTGCGAAACCGGAACTTCGACGATGCCATCTCGTCTATCCAGCGAATGACCTACTACGAGCGGGTGAAGGAAGAAATTACAAAGAAGCTTTAG MSKAKLRSSLLAVLRCNTAHSTAINFPNVSNSALSSQLPSNCISLSQLPSTAECFRLWRSSRCECLNNLRFPSRVFSSRSAEASDLKLRCWNCGAAAPTSVVFLVCDSCRSIQPLDQSVDYFQIFGLEKKYEIGDVNLESQYKDWQKKLHPDLVHSKSDREREYAAEQSARVIDAYRTLSKPLSRAIYILKLEGLDVNEEDTISEPELLNEIMEIREAVEDASGSQELNQIQSQMQEKLNHWSNTFAKALRNRNFDDAISSIQRMTYYERVKEEITKKL Homology
BLAST of CmaCh14G003740 vs. ExPASy Swiss-Prot
Match: Q8L7K4 (Iron-sulfur cluster co-chaperone protein HscB homolog OS=Arabidopsis thaliana OX=3702 GN=HSCB PE=1 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.1e-68 Identity = 139/240 (57.92%), Postives = 171/240 (71.25%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy Swiss-Prot
Match: Q8K3A0 (Iron-sulfur cluster co-chaperone protein HscB OS=Mus musculus OX=10090 GN=Hscb PE=1 SV=2) HSP 1 Score: 120.2 bits (300), Expect = 3.8e-26 Identity = 62/204 (30.39%), Postives = 111/204 (54.41%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy Swiss-Prot
Match: Q8IWL3 (Iron-sulfur cluster co-chaperone protein HscB OS=Homo sapiens OX=9606 GN=HSCB PE=1 SV=3) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-24 Identity = 60/192 (31.25%), Postives = 106/192 (55.21%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy Swiss-Prot
Match: A8GHY0 (Co-chaperone protein HscB OS=Serratia proteamaculans (strain 568) OX=399741 GN=hscB PE=3 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 1.6e-16 Identity = 50/162 (30.86%), Postives = 96/162 (59.26%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy Swiss-Prot
Match: A5F3G7 (Co-chaperone protein HscB homolog OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=hscB PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.6e-16 Identity = 51/164 (31.10%), Postives = 94/164 (57.32%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy TrEMBL
Match: A0A6J1J6P2 (uncharacterized protein LOC111481717 OS=Cucurbita maxima OX=3661 GN=LOC111481717 PE=3 SV=1) HSP 1 Score: 541.6 bits (1394), Expect = 2.0e-150 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy TrEMBL
Match: A0A6J1FAL5 (uncharacterized protein LOC111442330 OS=Cucurbita moschata OX=3662 GN=LOC111442330 PE=3 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 6.1e-144 Identity = 270/279 (96.77%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy TrEMBL
Match: A0A5A7TK02 (Iron-sulfur cluster co-chaperone protein HscB OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004800 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121 Identity = 237/279 (84.95%), Postives = 252/279 (90.32%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy TrEMBL
Match: A0A1S3B7N3 (iron-sulfur cluster co-chaperone protein HscB, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103486700 PE=3 SV=1) HSP 1 Score: 445.7 bits (1145), Expect = 1.5e-121 Identity = 237/279 (84.95%), Postives = 252/279 (90.32%), Query Frame = 0
BLAST of CmaCh14G003740 vs. ExPASy TrEMBL
Match: A0A6J1DD83 (uncharacterized protein LOC111019311 OS=Momordica charantia OX=3673 GN=LOC111019311 PE=3 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 3.0e-119 Identity = 233/280 (83.21%), Postives = 251/280 (89.64%), Query Frame = 0
BLAST of CmaCh14G003740 vs. NCBI nr
Match: XP_022983058.1 (uncharacterized protein LOC111481717 [Cucurbita maxima]) HSP 1 Score: 541.6 bits (1394), Expect = 4.0e-150 Identity = 279/279 (100.00%), Postives = 279/279 (100.00%), Query Frame = 0
BLAST of CmaCh14G003740 vs. NCBI nr
Match: XP_023528125.1 (uncharacterized protein LOC111791135 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 526.9 bits (1356), Expect = 1.0e-145 Identity = 271/279 (97.13%), Postives = 276/279 (98.92%), Query Frame = 0
BLAST of CmaCh14G003740 vs. NCBI nr
Match: KAG7017517.1 (Iron-sulfur cluster co-chaperone protein HscB, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 523.5 bits (1347), Expect = 1.1e-144 Identity = 270/279 (96.77%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of CmaCh14G003740 vs. NCBI nr
Match: XP_022935463.1 (uncharacterized protein LOC111442330 [Cucurbita moschata]) HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143 Identity = 270/279 (96.77%), Postives = 274/279 (98.21%), Query Frame = 0
BLAST of CmaCh14G003740 vs. NCBI nr
Match: KAG6580764.1 (Iron-sulfur cluster co-chaperone protein HscB-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 517.7 bits (1332), Expect = 6.2e-143 Identity = 267/279 (95.70%), Postives = 273/279 (97.85%), Query Frame = 0
BLAST of CmaCh14G003740 vs. TAIR 10
Match: AT5G06410.1 (DNAJ heat shock N-terminal domain-containing protein ) HSP 1 Score: 260.0 bits (663), Expect = 2.2e-69 Identity = 139/240 (57.92%), Postives = 171/240 (71.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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