
CmaCh14G003450 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCAGACCTCCGCTCTGAAACCAGACCCACCGCTGCCCAATCTCCGTCGCAGAAACTCGATCACGGTGCCCGTCGTCGTGTCATCTAAGCTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGTAGCGTCATCGCCGCCGCTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCTCCCCCTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCTATCTACTCCCCTACCGCCGCCTCTGCAGCAAATTCCGGCTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGGCCTCCTCCCCGAGCTCCTCTGGACCCCACCTCCTCCACCGTATCTGGCTTAGATTTTCAGCTTGGCTCAGCTTCGTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTAATCGAATATTTCGCGTTGTTGGGGTCAGTTTTGTCTAA ATGGACCAGACCTCCGCTCTGAAACCAGACCCACCGCTGCCCAATCTCCGTCGCAGAAACTCGATCACGGTGCCCGTCGTCGTGTCATCTAAGCTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGTAGCGTCATCGCCGCCGCTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCTCCCCCTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCTATCTACTCCCCTACCGCCGCCTCTGCAGCAAATTCCGGCTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGGCCTCCTCCCCGAGCTCCTCTGGACCCCACCTCCTCCACCGTATCTGGCTTAGATTTTCAGCTTGGCTCAGCTTCGTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTAATCGAATATTTCGCGTTGTTGGGGTCAGTTTTGTCTAA ATGGACCAGACCTCCGCTCTGAAACCAGACCCACCGCTGCCCAATCTCCGTCGCAGAAACTCGATCACGGTGCCCGTCGTCGTGTCATCTAAGCTAAACCTTCTCGCCGCCACCAAGTCCTCCCGTGGTGTAGCGTCATCGCCGCCGCTACCGTTGGCTTTCGAGCTCGTCCCAATAAAATCCTCCTCCTCCTCCCCCTCCCTTGCCTACACTTCCCTCAGAGACATTTTGCCCTCGGCTACCGCTATCTACTCCCCTACCGCCGCCTCTGCAGCAAATTCCGGCTACGAGATCTCGATCCGCAACCGCCTTGTGAAGCAGGCGGCGTGGGCCTATCTTCAGCCCATGGCCTCCTCCCCGAGCTCCTCTGGACCCCACCTCCTCCACCGTATCTGGCTTAGATTTTCAGCTTGGCTCAGCTTCGTCAACCTGCCCATAATTTCCAGTATAACCAACGCTTTTAATCGAATATTTCGCGTTGTTGGGGTCAGTTTTGTCTAA MDQTSALKPDPPLPNLRRRNSITVPVVVSSKLNLLAATKSSRGVASSPPLPLAFELVPIKSSSSSPSLAYTSLRDILPSATAIYSPTAASAANSGYEISIRNRLVKQAAWAYLQPMASSPSSSGPHLLHRIWLRFSAWLSFVNLPIISSITNAFNRIFRVVGVSFV Homology
BLAST of CmaCh14G003450 vs. ExPASy TrEMBL
Match: A0A6J1J4V9 (uncharacterized protein LOC111481768 OS=Cucurbita maxima OX=3661 GN=LOC111481768 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.1e-81 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CmaCh14G003450 vs. ExPASy TrEMBL
Match: A0A6J1F639 (uncharacterized protein LOC111442465 OS=Cucurbita moschata OX=3662 GN=LOC111442465 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 1.8e-79 Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of CmaCh14G003450 vs. ExPASy TrEMBL
Match: A0A5A7TKK1 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004370 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of CmaCh14G003450 vs. ExPASy TrEMBL
Match: A0A1S3B6B1 (uncharacterized protein LOC103486660 OS=Cucumis melo OX=3656 GN=LOC103486660 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.5e-68 Identity = 146/168 (86.90%), Postives = 153/168 (91.07%), Query Frame = 0
BLAST of CmaCh14G003450 vs. ExPASy TrEMBL
Match: A0A0A0LE45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G778400 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 5.2e-66 Identity = 143/168 (85.12%), Postives = 150/168 (89.29%), Query Frame = 0
BLAST of CmaCh14G003450 vs. NCBI nr
Match: XP_022983125.1 (uncharacterized protein LOC111481768 [Cucurbita maxima]) HSP 1 Score: 312.4 bits (799), Expect = 2.4e-81 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CmaCh14G003450 vs. NCBI nr
Match: XP_023526406.1 (uncharacterized protein LOC111789917 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.4 bits (781), Expect = 2.9e-79 Identity = 164/167 (98.20%), Postives = 165/167 (98.80%), Query Frame = 0
BLAST of CmaCh14G003450 vs. NCBI nr
Match: XP_022935679.1 (uncharacterized protein LOC111442465 [Cucurbita moschata]) HSP 1 Score: 305.1 bits (780), Expect = 3.8e-79 Identity = 162/166 (97.59%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of CmaCh14G003450 vs. NCBI nr
Match: KAG6580732.1 (hypothetical protein SDJN03_20734, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 299.3 bits (765), Expect = 2.1e-77 Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0
BLAST of CmaCh14G003450 vs. NCBI nr
Match: KAG7017485.1 (hypothetical protein SDJN02_19350, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 294.7 bits (753), Expect = 5.1e-76 Identity = 159/169 (94.08%), Postives = 162/169 (95.86%), Query Frame = 0
BLAST of CmaCh14G003450 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of CmaCh14G003450 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 58/143 (40.56%), Postives = 74/143 (51.75%), Query Frame = 0
BLAST of CmaCh14G003450 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-11 Identity = 50/111 (45.05%), Postives = 66/111 (59.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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