CmaCh14G002210 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCCAAACAGCTAAGAACGTTTCCAGGTATGGCTCCTAATTATCACCATTGTGTTGCTAGAAAACAGAGTATAACTTCAGCTAGTTCTACAAACCAAAGCAGTCCTTTAATGATGGTAGATATTTCTTTAGCCATGAATTGCCACCATGAATGGACTACAAACAACCACTAAAATCACCCAAATGCTTCATTCAATTGTCCGAAATCGTCACACAGAAAACTGACGTAAAATGTAGTTGTTACAGATCATGGAAGCAATTGATTGCCACAAACACAAAGAAAAAGGACATAAATCGAAGAATTTGAGCTGAATGAACTGAAAACCAAGAAGATAATCAGCCAGTTCCTTTAATCTTTCATTAATACTCACCGGCGAGCCGACAGACGCGTTTGGAGTTGAAGAAATAAGCAAACTGCAAGTTCCAGAAACCAATAACACGCGCCGAGAGCAGGCCAAATTGGCTTGCCGCTCTTTCAGTACCTTATCGACGTCTAAAATAAAACGACACGTCGTCTAATTCCCGTTCGACTTGTAGTCCATATTTTAATATTTTATCAATTTAAATCCTATTTTTGTTTCTCTTTTCCTTTTTTATTTTTTTTAAATATCCCATTAGTATCAACGGAAGCAGGGGAGGTGATTGGAATTCCATAGATCAACCCAAAACAAAACCTCTGCCGGCATCTGTTGCTTCCGCCGTCCGGTGGTCGAGATGGGAGGGTGCTTCGTGGTCGGCATATTGGGAGTTCTAATCCTAGCTCATGCTTCTTATTCCACCATCCAATGTATGCCCTAAAAAACCGCCTGATTATATTCTCCAACTGTAAACCCTGCAGTTCTCGATTGATCTTGTTTTGAATGCAGATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTATTCTCGCCGCTCTTTTTTCTTTCTTTAATTTTGGCTTTCAGTTGGTTCCGCTTATATCACTCGATTTGAGGTGTTTCTGAAATAAGGAAGTTTTTCTTGTCCCCTAATTTTAGGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACTGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCTGAGGAGAATAGGTACATTTTTCTGTCAATTTGTGCATGAAATGTGATTTTGCTAAATGTTTTGGATGGAATTCCGCCATTAGTTTTTCTACAATGAATAAGGAGTTGGTGTTGACGGTTGTAGACCGTTTGCCAATCCAGAAAAGCTAGGCTCTGGTAGCAAAACTCCGGTAAAGGTTATCACAAATATAACCTTTGTTACCAGCTCAGTCTATCCACTTCCACCTCCCCCTACCCCGTCCCCCTGTGTCTGCCAATTTACTGCCTTGCCTTCTTTTGCTTCAAAGTTCATATAAGAAGTGCAAAGGCATATAGTTTCCTAGTATCTGGTAGTTATTTTTGTTTTCTTAAAAGGTTCTACTAAGCCGCTCTTAAATGTCCGAAGAGATAGAGATGAACCCATTAGAAAGTTTTAGAGAATTTCTTTATGAGATCCCACGTCGGTTGGAGAGGGAGAGGGGAACGAAACATTCTTTATAAAGGTGTGAAAACCTCTCCCTAGCAGACACGTTTTAAAAACTTTAAGGGGAAGCTCGAAAGAGAGCTCAAAGAGGACAATATTTGCTAGCAGTGAGCTAGCTGTTACATTCTCTTTTTGGATTGTTCCCTGTATTTCCATGGTCCGTCCCTTAAATTTGGGTTTTGTTCGAGTTCAGAATATTTCAAGAATTTGTAGTTGTTACAACTAATTTCACTGTTAGTAGCATGTTCTTTCGTCCAGCAAGTTAAAATTAATTTTCATGTAGAGAAATATTTTTACATTTCAGGGTAGTTTTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGAGATCTCAGTCGTGATTAGAGTAGGCCCGGAGAATTGAAGCTGGAAGCAGAAATGGACGTTAAAGAACCTAAAGGAGATATTGCTGCATTCCATCAATCTTAATGTTTCTTCACTCGCTAATTATTTTGGATACTGCGAGGTTTTTTCGATGTTTATTTTATAGTCTCTTCCTCAAAACAAGGTTTTGCCATTGTTATTGAATTAGGCGTCTTTTGGATCGATATGAAAGGTTAGTATGTGTTTCTGCAATCTGGTTAACTTAGATTAGTTTGTTTTTAAATCTGCCGATGGTAAATGGTTTCAATTTGGTAGCTTATTTCTCTGCTGTGTACGATCCATTGTTATTGAATTAGGCCTCTTTTGGATGTGTGGAAATGACTTGGGGTTCTTGTTTTAAAATGAATTTTGCATCCTGATGCAATCCTGGGTCATTTTTTACATTTGCGTAGTG ATGACCCAAACAGCTAAGAACGTTTCCAGATCAACCCAAAACAAAACCTCTGCCGGCATCTGTTGCTTCCGCCGTCCGGTGGTCGAGATGGGAGGGTGCTTCGTGGTCGGCATATTGGGAGTTCTAATCCTAGCTCATGCTTCTTATTCCACCATCCAATATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACTGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCTGAGGAGAATAGGGTAGTTTTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGAGATCTCAGTCGTGATTAGAGTAGGCCCGGAGAATTGAAGCTGGAAGCAGAAATGGACGTTAAAGAACCTAAAGGAGATATTGCTGCATTCCATCAATCTTAATGTTTCTTCACTCGCTAATTATTTTGGATACTGCGAGGTTTTTTCGATGTTTATTTTATAGTCTCTTCCTCAAAACAAGGTTTTGCCATTGTTATTGAATTAGGCGTCTTTTGGATCGATATGAAAGGTTAGTATGTGTTTCTGCAATCTGGTTAACTTAGATTAGTTTGTTTTTAAATCTGCCGATGGTAAATGGTTTCAATTTGGTAGCTTATTTCTCTGCTGTGTACGATCCATTGTTATTGAATTAGGCCTCTTTTGGATGTGTGGAAATGACTTGGGGTTCTTGTTTTAAAATGAATTTTGCATCCTGATGCAATCCTGGGTCATTTTTTACATTTGCGTAGTG ATGACCCAAACAGCTAAGAACGTTTCCAGATCAACCCAAAACAAAACCTCTGCCGGCATCTGTTGCTTCCGCCGTCCGGTGGTCGAGATGGGAGGGTGCTTCGTGGTCGGCATATTGGGAGTTCTAATCCTAGCTCATGCTTCTTATTCCACCATCCAATATAGGAACGTATTGAAGATTATGCAGGAAGAGTTTTCAGGCCCTCCGTTTAATGTGGCAATCGAATTGAGTCTAGGGTTAGTATTGTCCGTGTGGGCTGCACTCACTGTGCCAGGGAAGTTTCGCTCGATTAATCCAGAATCTGAGGAGAATAGGGTAGTTTTTCTTCCTGCCAATCAAGATTTTATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGAAAACAGATTTGAAGCTGAAACATTGA MTQTAKNVSRSTQNKTSAGICCFRRPVVEMGGCFVVGILGVLILAHASYSTIQYRNVLKIMQEEFSGPPFNVAIELSLGLVLSVWAALTVPGKFRSINPESEENRVVFLPANQDFMVFNHRGKLFPQKTDLKLKH Homology
BLAST of CmaCh14G002210 vs. ExPASy Swiss-Prot
Match: Q2HIM5 (Membrane magnesium transporter OS=Arabidopsis thaliana OX=3702 GN=At5g03345 PE=3 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 9.7e-36 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy Swiss-Prot
Match: Q86J02 (ER membrane protein complex subunit 5 homolog OS=Dictyostelium discoideum OX=44689 GN=mmgt PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 27/90 (30.00%), Postives = 46/90 (51.11%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy TrEMBL
Match: A0A6J1J6Z8 (membrane magnesium transporter-like OS=Cucurbita maxima OX=3661 GN=LOC111481796 PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 9.1e-53 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy TrEMBL
Match: A0A6J1F8N1 (membrane magnesium transporter-like OS=Cucurbita moschata OX=3662 GN=LOC111441841 PE=3 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.5e-50 Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy TrEMBL
Match: A0A5D3DND5 (Membrane magnesium transporter OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002680 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.0e-43 Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy TrEMBL
Match: A0A1S3B730 (membrane magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103486496 PE=3 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 5.0e-43 Identity = 88/106 (83.02%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of CmaCh14G002210 vs. ExPASy TrEMBL
Match: A0A0A0LFT4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G740190 PE=3 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 6.5e-43 Identity = 87/106 (82.08%), Postives = 99/106 (93.40%), Query Frame = 0
BLAST of CmaCh14G002210 vs. NCBI nr
Match: KAG6580614.1 (Membrane magnesium transporter, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.9 bits (603), Expect = 1.0e-58 Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0
BLAST of CmaCh14G002210 vs. NCBI nr
Match: XP_022983163.1 (membrane magnesium transporter-like [Cucurbita maxima]) HSP 1 Score: 216.1 bits (549), Expect = 1.9e-52 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of CmaCh14G002210 vs. NCBI nr
Match: XP_022934760.1 (membrane magnesium transporter-like [Cucurbita moschata] >KAG7017371.1 Membrane magnesium transporter [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.8 bits (530), Expect = 3.0e-50 Identity = 102/106 (96.23%), Postives = 104/106 (98.11%), Query Frame = 0
BLAST of CmaCh14G002210 vs. NCBI nr
Match: XP_023529052.1 (membrane magnesium transporter-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 204.1 bits (518), Expect = 7.4e-49 Identity = 99/106 (93.40%), Postives = 103/106 (97.17%), Query Frame = 0
BLAST of CmaCh14G002210 vs. NCBI nr
Match: XP_038903501.1 (membrane magnesium transporter [Benincasa hispida]) HSP 1 Score: 185.3 bits (469), Expect = 3.6e-43 Identity = 88/106 (83.02%), Postives = 100/106 (94.34%), Query Frame = 0
BLAST of CmaCh14G002210 vs. TAIR 10
Match: AT5G03345.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 151.0 bits (380), Expect = 6.9e-37 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 0
BLAST of CmaCh14G002210 vs. TAIR 10
Match: AT5G03345.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 144.4 bits (363), Expect = 6.5e-35 Identity = 66/99 (66.67%), Postives = 82/99 (82.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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