CmaCh14G002110 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G002110
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr14: 908672 .. 910785 (+)
RNA-Seq Expression	CmaCh14G002110
Synteny	CmaCh14G002110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGTCGATGTCGATTTCACCGGCTATTGACAGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGCGATGTTCTTGGGATCGGCAGTGTACATGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAACTTCTCAGGTTTGGATTGGAAATCTTTCATTCGTTCCTCTTTTTTTTTTTTTTTTTTTTCTCATTATGTTGGTTCTCGTCACGAAAATTTGTTTGAAACTTCAGGAAATGGTACCGGTTTCTCTTATCCATGCGGTCGGAACTTCGAAATGTAAAATGCAGTAAGGTTATCTGTTTTAAATTGCTCGTTTATTATCGTTTAGGAGGCAATTCCACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATGTAAAAGTGATCTAAATAAGGTCAGTATCCCAGGTTTACGTTGCCATGAATTCGAAGGAAATTTTTCCTCATTGCATTGAAACTATATATTTGCCTTGATCCAGCGGAATGATTTTGTTACCATTTGTGCAATTCTTTGTAACAGGTTTTTTGACGGGCGCATGCTTGAATTTTTTTTTTTATCTCGTTGCTGCTCCTTCGATTCACGGCTTGCCAATCAAAAAATTCAGAACTTCTTGCATTGTCAACCGGCAAAAAAACCTGTTAAACGCGGAGTATGCGATTTTTTTTTTGAATCGAACAATTAACTCTCTGTTCTTGCCATATTGTCGATCATTTATCTGTCGTACGATGCTGTTGTAAGAAACTGGTTTACGTTACATATTAGCATAAGCTTTTGGGTTTAATACAAATTAACTTGCTATTAGAGCATGGAATATTCAAACATTGGAATGTGATTTCCTTTTCAATTAGTACTGATAGTCCCTTGTTGGATCTTATACTTTTCTCGAATTCTACAAGTGAGAGGCATGCTGAAAAAACATACATAAGATTGAACAAATCTCAATCAACTAATTGAACTTCTGAATGGTTTTTTTTAAGAACCTCCATGAGCAGTAAGTTTCTTGTACGTCTTTGTATTTGACCACTGATTCAGTACACTCATACTTGGCAGCTTAAGGAATCTTTTAAGAAGGTGGGGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGTAATTCCTTGTTATAATTATATTGTTGTTGAATTTCGAGTATATAACTAAGTAATTTCTCTCCTCAATCTTCCCTTCAAAAAATTAGAAAATGACTCGAGAAGATCCGTATATCATCACATACATGCAAGAAATTCTATCGCTTTGTCTTCAGAACTGAAATTTTGTCCCATATGATCTACTTGGTTTTGTCCCCCTTAAAATGTCAAGGTTTTCAGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACGTCGAGATGTGGCTCTCAATAGAGCTAATCAACAGACACTGAATATAGTACTAGCATTGAATTTGAATTGTAAGACGTCTATAACAAAGGTTGCTGGTGGTGGCTTTTGATGGGAATTAGTACTTAAACCAAATGTTTGTTTGGATTTTGCAGGAGAGGAGATTATTATGCAATCTCCACGAGACCATTGACTTTCTCTTTACTTTTTCATCTCAACCCAGCTGCTTATTCCCATATTTCACTTCGGAGGATTGGATGGATTGTTAAGACTGAAGTTTCAGCTGGGATGACAAAGTGGATAGAGGAAAGAGAAACATTGAGCTGCATTGTCGCTCCTCATAGGCTAAGCAGTGACAAAAGAGGTGAAAAACATGGAAGCTTCTTTTCATGAATCAAGTGTAAGTATAAGGTTAGTTTGTAGAACAATTTAGAGTACTCTTTTCTTCTCAGTACTCCTTTTAGAATTCAAATGATTCAATAATTAATTTGAAATCCTGTTCAGAGCAATTTAGAATGTGGAAATGATTTTAAATCTGGGGTTTTTAGGTAGGATTTTGAGTCGATATTATATTTCAGCTGAAGACAAACTTAGAAACCAATGATTTGGTGTGACGTCACACTATTAAATGTATGAG

mRNA sequence

ATTGTCGATGTCGATTTCACCGGCTATTGACAGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGCGATGTTCTTGGGATCGGCAGTGTACATGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAACTTCTCAGGAAATGGTACCGGTTTCTCTTATCCATGCGGTCGGAACTTCGAAATGTAAAATGCAGTAAGGTTATCTGTTTTAAATTGCTCGTTTATTATCGTTTAGGAGGCAATTCCACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATCGGAATGATTTTGTTACCATTTGTGCAATTCTTTGTAACAGGTTTTTTGACGGGCGCATGCTTGAATTTTTTTTTTTATCTCGTTGCTGCTCCTTCGATTCACGGCTTGCCAATCAAAAAATTCAGAACTTCTTGCATTGTCAACCGGCAAAAAAACCTGTTAAACGCGGACTTAAGGAATCTTTTAAGAAGGTGGGGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACTACTAGCATTGAATTTGAATTGAGAGGAGATTATTATGCAATCTCCACGAGACCATTGACTTTCTCTTTACTTTTTCATCTCAACCCAGCTGCTTATTCCCATATTTCACTTCGGAGGATTGGATGGATTGTTAAGACTGAAGTTTCAGCTGGGATGACAAAGTGGATAGAGGAAAGAGAAACATTGAGCTGCATTGTCGCTCCTCATAGGCTAAGCAGTGACAAAAGAGGTGAAAAACATGGAAGCTTCTTTTCATGAATCAAGTGTAAGTATAAGGTTAGTTTGTAGAACAATTTAGAGTACTCTTTTCTTCTCAGTACTCCTTTTAGAATTCAAATGATTCAATAATTAATTTGAAATCCTGTTCAGAGCAATTTAGAATGTGGAAATGATTTTAAATCTGGGGTTTTTAGGTAGGATTTTGAGTCGATATTATATTTCAGCTGAAGACAAACTTAGAAACCAATGATTTGGTGTGACGTCACACTATTAAATGTATGAG

Coding sequence (CDS)

ATGTCGATTTCACCGGCTATTGACAGACAGAGAGGGCACATGGGCGCAGATCGGAAGCGAATCTTCATAGGTTTGGCGGTGGCGATGTTCTTGGGATCGGCAGTGTACATGAGGCTTTGGACCATCGACTTCTCCATGTCTTCCGGCCATGCCGAACTTCTCAGGAAATGGTACCGGTTTCTCTTATCCATGCGGTCGGAACTTCGAAATGTAAAATGCAGTAAGGTTATCTGTTTTAAATTGCTCGTTTATTATCGTTTAGGAGGCAATTCCACCTTGCGAACCGGGAGGCAATGGATGAATCTGCGGAATGGCGTCGTATGTACGACCACGAACACGATAGAGCTAATAAATCGGAATGATTTTGTTACCATTTGTGCAATTCTTTGTAACAGGTTTTTTGACGGGCGCATGCTTGAATTTTTTTTTTTATCTCGTTGCTGCTCCTTCGATTCACGGCTTGCCAATCAAAAAATTCAGAACTTCTTGCATTGTCAACCGGCAAAAAAACCTGTTAAACGCGGACTTAAGGAATCTTTTAAGAAGGTGGGGGATGCTGCTAGCTTCGATCAGAAGCTAACAAAGATGCAAACGGAAAACTTAGCTCTTCGCACAAAAGTGGATGCCTTACAGCAAAAGCTAAAGGCCGAGACTACTAGCATTGAATTTGAATTGAGAGGAGATTATTATGCAATCTCCACGAGACCATTGACTTTCTCTTTACTTTTTCATCTCAACCCAGCTGCTTATTCCCATATTTCACTTCGGAGGATTGGATGGATTGTTAAGACTGAAGTTTCAGCTGGGATGACAAAGTGGATAGAGGAAAGAGAAACATTGAGCTGCATTGTCGCTCCTCATAGGCTAAGCAGTGACAAAAGAGGTGAAAAACATGGAAGCTTCTTTTCATGA

Protein sequence

MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRFLLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRNDFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESFKKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETTSIEFELRGDYYAISTRPLTFSLLFHLNPAAYSHISLRRIGWIVKTEVSAGMTKWIEERETLSCIVAPHRLSSDKRGEKHGSFFS

Homology

[Close]

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL
Match: A0A6J1J184 (uncharacterized protein LOC111482511 OS=Cucurbita maxima OX=3661 GN=LOC111482511 PE=4 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 3.5e-36
Identity = 107/219 (48.86%), Postives = 117/219 (53.42%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKW +F
Sbjct: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWRQF 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
            L+ R                           +    +W  + +             + +
Sbjct: 61  HLANR-------------------------EAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C    N+                                           LKESF
Sbjct: 121 DRANKCKSDLNK-------------------------------------------LKESF 138

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETT 220
           KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAET+
Sbjct: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETS 138

[Close]

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL
Match: A0A6J1F1L0 (uncharacterized protein LOC111441336 OS=Cucurbita moschata OX=3662 GN=LOC111441336 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.3e-34
Identity = 104/219 (47.49%), Postives = 114/219 (52.05%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAID QRGHMGADRKRIFIGLAVAMFLGS VY RLWTIDFSMSSGHAELLRKW +F
Sbjct: 1   MSISPAIDGQRGHMGADRKRIFIGLAVAMFLGSVVYTRLWTIDFSMSSGHAELLRKWRQF 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
            L+ R                           +    +W  + +             + +
Sbjct: 61  DLANR-------------------------EAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C    N+                                           LKESF
Sbjct: 121 DRANKCRSDLNK-------------------------------------------LKESF 138

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETT 220
           KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAET+
Sbjct: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETS 138

[Close]

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL
Match: A0A5A7TLC1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold236G003560 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-14
Identity = 67/204 (32.84%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 14  MGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRFLLSMRSELRNVKC 73
           MG DRKRI IGL VAMF+G  VYM+LWTID+SMS+  AELLR+                 
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRR----------------- 60

Query: 74  SKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRNDFVTICAILCNRF 133
                      + L     +    +W  + +       N ++  NR              
Sbjct: 61  ----------QFDLANREAMDESAEWRRMYD-------NELDRANR-------------- 120

Query: 134 FDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESFKKVGDAASFDQKL 193
                                              K  + + LK SF+KVGDAA  ++KL
Sbjct: 121 ----------------------------------CKSELNQQLKASFEKVGDAARINEKL 122

Query: 194 TKMQTENLALRTKVDALQQKLKAE 218
           TKMQ EN ALRT+VDALQ++L+AE
Sbjct: 181 TKMQEENFALRTQVDALQRRLEAE 122

[Close]

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL
Match: A0A1S3B6A3 (uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 68/204 (33.33%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 14  MGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRFLLSMRSELRNVKC 73
           MG DRKRI IGL VAMF+G  VYM+LWTID+SMS+  AELLR+                 
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRR----------------- 60

Query: 74  SKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRNDFVTICAILCNRF 133
                      + L     +    +W  + +       N ++  NR      C    N+ 
Sbjct: 61  ----------QFDLANREAMDESAEWRRMYD-------NELDRANR------CKSELNQ- 120

Query: 134 FDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESFKKVGDAASFDQKL 193
                                                     LK SF+KVGDAA  ++KL
Sbjct: 121 ------------------------------------------LKASFEKVGDAARINEKL 121

Query: 194 TKMQTENLALRTKVDALQQKLKAE 218
           TKMQ EN ALRT+VDALQ++L+AE
Sbjct: 181 TKMQEENFALRTQVDALQRRLEAE 121

[Close]

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL
Match: A0A5D3DPC8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G002550 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.4e-13
Identity = 68/204 (33.33%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 14  MGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRFLLSMRSELRNVKC 73
           MG DRKRI IGL VAMF+G  VYM+LWTID+SMS+  AELLR+                 
Sbjct: 1   MGGDRKRILIGLTVAMFVGLVVYMKLWTIDYSMSTDEAELLRR----------------- 60

Query: 74  SKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRNDFVTICAILCNRF 133
                      + L     +    +W  + +       N ++  NR      C    N+ 
Sbjct: 61  ----------QFDLANREAMDESAEWRRMYD-------NELDRANR------CKSELNQ- 120

Query: 134 FDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESFKKVGDAASFDQKL 193
                                                     LK SF+KVGDAA  ++KL
Sbjct: 121 ------------------------------------------LKASFEKVGDAARINEKL 121

Query: 194 TKMQTENLALRTKVDALQQKLKAE 218
           TKMQ EN ALRT+VDALQ++L+AE
Sbjct: 181 TKMQEENFALRTQVDALQRRLEAE 121

[Close]

BLAST of CmaCh14G002110 vs. NCBI nr
Match: KAG6580606.1 (hypothetical protein SDJN03_20608, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282.3 bits (721), Expect = 4.8e-72
Identity = 173/304 (56.91%), Postives = 184/304 (60.53%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAID QRGHMGADRKR FIGLAVAMFLGS VY RLWTIDFSMSSGHAELLR+    
Sbjct: 1   MSISPAIDGQRGHMGADRKRTFIGLAVAMFLGSVVYTRLWTIDFSMSSGHAELLRR---- 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
                                   + L     +    +W  + +             + +
Sbjct: 61  -----------------------QFDLANREAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C    N+                                           LKESF
Sbjct: 121 DRANKCRSDLNK-------------------------------------------LKESF 180

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETTSIEFELRG-DYYAISTRPLTF 240
           KKV DAASFDQ+LTKMQTENLALRTKVDALQQKLKAET  IEFELRG  YYAISTRPLTF
Sbjct: 181 KKVEDAASFDQELTKMQTENLALRTKVDALQQKLKAET--IEFELRGYYYYAISTRPLTF 219

Query: 241 SLLFHLNPAAYSHISLRRIGWIVKTEVSAGMTKWIEERETLSCIVAPHRLSSDKRGEKHG 300
           S L HLNPAAYSHISL RIGWIVKTEVSAGMTKWIE RETLSCIVAPHRLSSDK+G KHG
Sbjct: 241 SSLVHLNPAAYSHISLLRIGWIVKTEVSAGMTKWIEGRETLSCIVAPHRLSSDKKGGKHG 219

Query: 301 SFFS 304
           SFFS
Sbjct: 301 SFFS 219

[Close]

BLAST of CmaCh14G002110 vs. NCBI nr
Match: XP_022984097.1 (uncharacterized protein LOC111482511 [Cucurbita maxima])

HSP 1 Score: 162.2 bits (409), Expect = 7.2e-36
Identity = 107/219 (48.86%), Postives = 117/219 (53.42%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKW +F
Sbjct: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWRQF 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
            L+ R                           +    +W  + +             + +
Sbjct: 61  HLANR-------------------------EAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C    N+                                           LKESF
Sbjct: 121 DRANKCKSDLNK-------------------------------------------LKESF 138

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETT 220
           KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAET+
Sbjct: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETS 138

[Close]

BLAST of CmaCh14G002110 vs. NCBI nr
Match: XP_022934052.1 (uncharacterized protein LOC111441336 [Cucurbita moschata])

HSP 1 Score: 155.2 bits (391), Expect = 8.8e-34
Identity = 104/219 (47.49%), Postives = 114/219 (52.05%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAID QRGHMGADRKRIFIGLAVAMFLGS VY RLWTIDFSMSSGHAELLRKW +F
Sbjct: 1   MSISPAIDGQRGHMGADRKRIFIGLAVAMFLGSVVYTRLWTIDFSMSSGHAELLRKWRQF 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
            L+ R                           +    +W  + +             + +
Sbjct: 61  DLANR-------------------------EAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C    N+                                           LKESF
Sbjct: 121 DRANKCRSDLNK-------------------------------------------LKESF 138

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETT 220
           KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAET+
Sbjct: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETS 138

[Close]

BLAST of CmaCh14G002110 vs. NCBI nr
Match: KAG7017361.1 (hypothetical protein SDJN02_19226 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-30
Identity = 98/219 (44.75%), Postives = 109/219 (49.77%), Query Frame = 0


Query: 1   MSISPAIDRQRGHMGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRF 60
           MSISPAID QRGHMGADRKRIFIGLAV MFLGS VY RLWTIDFSMSSGHAELLR+    
Sbjct: 1   MSISPAIDGQRGHMGADRKRIFIGLAVVMFLGSVVYTRLWTIDFSMSSGHAELLRR---- 60

Query: 61  LLSMRSELRNVKCSKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRN 120
                                   + L     +    +W  + +             + +
Sbjct: 61  -----------------------QFDLANREAMDESAEWRRMYD-------------HEH 120

Query: 121 DFVTICAILCNRFFDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESF 180
           D    C                                +  + H           LKESF
Sbjct: 121 DRANKC-----------------------------RSDLNKYTHTWQ--------LKESF 142

Query: 181 KKVGDAASFDQKLTKMQTENLALRTKVDALQQKLKAETT 220
           KKV DAASFDQKLTKMQTENLALRTKVDALQQKLKAET+
Sbjct: 181 KKVEDAASFDQKLTKMQTENLALRTKVDALQQKLKAETS 142

[Close]

BLAST of CmaCh14G002110 vs. NCBI nr
Match: XP_023528341.1 (uncharacterized protein LOC111791291 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 125.6 bits (314), Expect = 7.5e-25
Identity = 88/206 (42.72%), Postives = 98/206 (47.57%), Query Frame = 0


Query: 14  MGADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWYRFLLSMRSELRNVKC 73
           M ADRKRIF GLAVAMFLGS VYMRLWTIDFSMSSGHAELLRKW +F             
Sbjct: 1   MDADRKRIFTGLAVAMFLGSVVYMRLWTIDFSMSSGHAELLRKWRQF------------- 60

Query: 74  SKVICFKLLVYYRLGGNSTLRTGRQWMNLRNGVVCTTTNTIELINRNDFVTICAILCNRF 133
                        L     +    +W  + +             + +D    C    N+ 
Sbjct: 61  ------------DLANGKAMDESAEWRRMYD-------------HEHDRANKCRSDLNK- 120

Query: 134 FDGRMLEFFFLSRCCSFDSRLANQKIQNFLHCQPAKKPVKRGLKESFKKVGDAASFDQKL 193
                                                     LKESFKKVGDAASFDQKL
Sbjct: 121 ------------------------------------------LKESFKKVGDAASFDQKL 125

Query: 194 TKMQTENLALRTKVDALQQKLKAETT 220
           T MQTENLALRTKVDALQQK+KAET+
Sbjct: 181 TTMQTENLALRTKVDALQQKIKAETS 125

[Close]

BLAST of CmaCh14G002110 vs. TAIR 10
Match: AT2G37195.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 51.6 bits (122), Expect = 1.3e-06
Identity = 22/44 (50.00%), Postives = 33/44 (75.00%), Query Frame = 0


Query: 15 GADRKRIFIGLAVAMFLGSAVYMRLWTIDFSMSSGHAELLRKWY 59
          G++RK I +GL +A+ LG  VY+RLWTID+++SS   E LR+ +
Sbjct: 4  GSERKTILVGLVLALVLGIGVYLRLWTIDYTLSSDDTERLRRQF 47

The following BLAST results are available for this feature:

BLAST of CmaCh14G002110 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G002110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J184	3.5e-36	48.86	uncharacterized protein LOC111482511 OS=Cucurbita maxima OX=3661 GN=LOC111482511...	[more]
A0A6J1F1L0	4.3e-34	47.49	uncharacterized protein LOC111441336 OS=Cucurbita moschata OX=3662 GN=LOC1114413...	[more]
A0A5A7TLC1	2.2e-14	32.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B6A3	1.4e-13	33.33	uncharacterized protein LOC103486481 OS=Cucumis melo OX=3656 GN=LOC103486481 PE=...	[more]
A0A5D3DPC8	1.4e-13	33.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh14G002110 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580606.1	4.8e-72	56.91	hypothetical protein SDJN03_20608, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022984097.1	7.2e-36	48.86	uncharacterized protein LOC111482511 [Cucurbita maxima]	[more]
XP_022934052.1	8.8e-34	47.49	uncharacterized protein LOC111441336 [Cucurbita moschata]	[more]
KAG7017361.1	1.6e-30	44.75	hypothetical protein SDJN02_19226 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023528341.1	7.5e-25	42.72	uncharacterized protein LOC111791291 isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh14G002110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37195.1	1.3e-06	50.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..213
None	No IPR available	PANTHER	PTHR37215	ACYL-COA-BINDING DOMAIN PROTEIN	coord: 15..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G002110.1	CmaCh14G002110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane