
CmaCh14G000890 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGAGGAACCCAATAACACAACACCCAAAGCTCTCTTATCGTCGATCAATACCAAGCTCTTCTAATCTAATTTTTTTTGTAAAAGCTTTTGCATTCTGAATGTGAGTTCCAAACTTTTGAGTTGTTTAAACATTGTTTTTTTATGAAGAAATAAATGAATTGATGAGACTTTAAGAGAAATAGGACATAAAGGTTGGATTTTTGTTGAAATTTGTTGCTTTTGGGAGATTTGTTTAATGGTCTATCTTTCACGTTAGCAAGCAATATTTTATTTTGTGGATATTCATAAATTTTATATAAAATTAGAGAGTAAATTTAAGGAAAATTGAACTAATGAAGTAAGTTAATGAAAGTAATAAAGTTTAAACATTCGTGGTTAAAGTGAGTTTAGCTTCATAATATTAATGAAAGTAATGTGTAAAATTTAAATTAACATAATTTTAAGCAAAAGATTAATTGCCGCATTTTCTTTGGTTGAAGAGAGAATTATAAGCATAGACCAAAAGGTAGAGGCATAGCTTAGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTTGGCTGATTCTAGGGTTTATTTCTCTCTCTTCTTCCTATTTTGTCTTTTGAGGTGTGATTCTGATTATGGACGAAGCCAGCAATGGAGGGATGTTGTATCATGAGGTACAAGAATCAAAGCTCTGCGCTGTGCATTGTGTCAACACCGTGTTGCAGGGTCCCTTCTTCTCCGAATTCGATTTGGCTGCTCTGGCATACGATCTTGACCGAAAAGAACGCCAGATGATGCTTACTGGTTCCACCACCGGTGATTTTCTCTCCGAGGATTCTCACAATGTCTCCTTGGACGGTGATTTTAGCATCCAGGTTTGATTTCTATCGCAATATCTGTTCTTGGTTGTTATTCTCTTCTCCGTCTCCTTCTCGAACTTGGTTGAGGGAAAGTGAAGGTCTTCTTTGCATATCTGTTGATTCGTTTGATAATGGGCTAAAATCTTGCCTCATGCTGTCGAGAACTATGGTCAATTTAGTGTGAATACGCTCGTTCTTCCATGGAGAGTCTTTGTGTAACTTCTTCAATCTGATTTGAATTCTCTCTACACGCGAATAGACTTACTCGAATTCCAGTCGTTATTGAATATTTTAAAACAGTGGTATTCGAATATATCGAACGTCTTATGGAAAGCAATTGAATTGCGATCCTGATGTCATAGTTATGTATTCTCTTAACGTAGTGACAAACCATTGTAAGCCACTATGCAGTCGTGACAGTCATGAACCATTTGCGTAATGGTTACAACAGTTATTTTTTTGAATTTAAAATAGCTGATACATTGACTTGTAATGATATGGGAATTAGTTAAAATACCTTTTTCTAAACAATGTTCACTAATTGCAAGAACCCATAGCTTCTTTTCTCCTATGTCTCAATGTCGTCCACCTGAGATAGCAGCGTTGAGTAGTGTAGTGGTGCAAAATTGATTAACATTGCAATGCACGACCTTTGTGGCAATGCTTGCTACTACTATTCGGTTGTACCTGATAATACAGTAAAAGTTCGTTGTGATTCCTTCAAGTGATGTACGTTTCTTGCTGTATGCTCTGCTTCAAATGTGAAAATTTAAAGAATAGGTTTACCTTTAACTTATAACTGTGAATGAGAGTTGACCACATGGTGTGTTGGGGGAGAGCTTTGGGCATAGCTATTCTAGAAGAGATATACTTATGATCTCTTAGGGTATCATTTGATAACCATTTGGTTTTTTTTTTTTTGTTTTCGAAAATTGTGTTTATTTCTTGCAATTTCTTTATTTTCATATTTCTTGAAACATTGGTAAAAAGTAGACAACAAAGCAAAGAAACTGAGAGGTGAAAGTAGTGTTTATAAGCTTTATCTTTTTAAACAAAAAGTTAAATGGTTATCAAATGGGGCCTTATTTCTTGAATTTAACTTAATTAGAATATGGGATGGCTAGAGGTTGTTAAGGTCTCATTTAGTAGCATTTGGTTTTTTTCTTTTTGGAAATTGTGCTTATTTTCTCATAATTTCTTTATTTTCATATTTCTTAAGGAAACATTGGTAAAAAATAGATAACAAAGCAAAGAAACTTATAGGTGAAAGTAGTGTTTATAAGATCAATTTTTAAACTAAAATTCAAATGGTTATCAAATTAGGCCTTAATACTTGAATTTAACTTGAATTAGCATATGAGATGGTTTGAGATTGTTAGAAGATTTGTTTTACCAGCAACTGGTTAAAAAGAAAGACGGGAAGTGAGGGAGTAGAGCATGATTTAGTGACTAATCAGAAAATATTGGAAATGGGCAAGTAAGGACGGACTTTTGACCTTCTTCCCTAATCTTGTAATATGTTCCTTATTTTAATGGAAAAATTCTTGGTTCCCATCAACTATACTGGACAAGACACGTTGGTTATGAGCTTTGTGGATATTAGAGTGATGAAACTCAATACCTTATTTTGGATACTCAAATTTAGCACTCCATCTCTCGTTTCTTTCTTTCTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTGGGTAAAGTTTTGGTGCAAAACAGGGAAGTATTCAGATGGAGTGGAGTTCATTTTTTATAAACCAATTTTCTTCAATGCGTATATAACAAGCAATGTGTAGAACCTGTTGGGATGATCTTATTTGTCTAAACCATTATATATTTGCTTGCAGGTATTACAAAAGGCTTTGGAGGTATGGGATCTCCAAGTCATTGCTCTCAACTCACCAGCTGCTGAACTTGCACAGATTGATCCTGAACTGGAGAGTGCATTTATTTGTCACTTGCAAAACCATTGGTTTTGTATTAGGAAAGTGAATGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAGAATCTTTCTAAGTTTTACCTTTCAGCTTACTTGGACTCTCTAAAGGGCTTCGGTTGGAGCATTTTTATTGTGAGGGGTAATTTCCCCAAGGATTTCCCCATCTCATGCTCTGAAGCATCCAACGGTTATGGTCAATGGCTTACCCCTGAGGATGCTGATAGGATAACCAAATCGTGCAACTCAACCCAAGCCCGCCCTCCTCAAGGAATAAACTGGACAAAGCCGCAAGATACGTTTCTTTCATATGGAGATGCAGAAATGCTGATGGACGTGGAGGATGAGGACTTCAAGGCTGCAATAGCTGCTAGCTTGATGGATTCCCCAGCAGTCATGGCAGCAGGAGTTGCTAACCCCCATAATGAACCTGCCGTTTCCTTCACCCAAGCTGCCTCTCCCCAGAATAATATACCTGTTGCTTCCCATGAAACTGCCAACACTCAACATGTACCTGTTTCCCCAAAAGCTTTCACCCACCAAGATGTTCCTGCAGTTGCTCCCAAAGCTGCCACCCTCAAAGATGTACCTGTAGTTTCCACCAAACCTGCCTCCCCCCAAGACATGCCTGTTGTTACCCCTGAAGCTTCCATCTCCCAGAATGTACGTGCACTTTCCCCCGATGCAGCTGCTACCTTACATGCAGTTTCCGCCGCCAAAGCTACCACCCCCAATAATCTTACGGTCTGCACTGAAGTTGCTGTTCATAAAAACGAGCCTGCAAATGAATCTGTAGGCAATGCAGACGCTGCCTTTGATGAAAGTGGACTTGCAGATAATGCAGAATGCGCTGTTTCGAGCCCCCGAAAGAAAATTAGTCGTACGATGTGGGAGCTGTATGAGGAAGAAGAGTGCTTTCTGCCTTGAATATGATTTTTGGTTCAAGACGGATGAGAACAGGATTGACCCATTGACAAGAATAAGAGAATTTGCAGGAGAATGGGAACCTCCGGATCCTTGTTGAGCTTGAGGTTAGCTAGTTGAAGTCGAATCCATGTTTTACAGTCGTTCTGTGCAGGGTAACTATATTCACTTACTTTTTTCAATTTTCGGATTGATACTGTATAAATTCTTCAACAAATAAGCCGTCGACTTGGCCTCTGAATTGTCACAAATGTTGGATTACAGAGATGTTACTTCTTTGAAAACATTTTTAAACCTCTAAGTATCCCCCGTTACTCATGTTCAAATCAAAACATGTTATAAACTGAAACTTGTGTGTTAAGATAAGAATAGCCCCACTCGAATCTGATGATCTGAATTAATGAAGTGCTTCCAGAGTTGGTTGGTAACTCAATCAAAATACATTTTTTTATTAGGTTAGGTCGGG ATGCTTTTGCATTCTGAATGTGTGATTCTGATTATGGACGAAGCCAGCAATGGAGGGATGTTGTATCATGAGGTACAAGAATCAAAGCTCTGCGCTGTGCATTGTGTCAACACCGTGTTGCAGGGTCCCTTCTTCTCCGAATTCGATTTGGCTGCTCTGGCATACGATCTTGACCGAAAAGAACGCCAGATGATGCTTACTGGTTCCACCACCGGTGATTTTCTCTCCGAGGATTCTCACAATGTCTCCTTGGACGGTGATTTTAGCATCCAGGTATTACAAAAGGCTTTGGAGGTATGGGATCTCCAAGTCATTGCTCTCAACTCACCAGCTGCTGAACTTGCACAGATTGATCCTGAACTGGAGAGTGCATTTATTTGTCACTTGCAAAACCATTGGTTTTGTATTAGGAAAGTGAATGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAGAATCTTTCTAAGTTTTACCTTTCAGCTTACTTGGACTCTCTAAAGGGCTTCGGTTGGAGCATTTTTATTGTGAGGGGTAATTTCCCCAAGGATTTCCCCATCTCATGCTCTGAAGCATCCAACGGTTATGGTCAATGGCTTACCCCTGAGGATGCTGATAGGATAACCAAATCGTGCAACTCAACCCAAGCCCGCCCTCCTCAAGGAATAAACTGGACAAAGCCGCAAGATACGTTTCTTTCATATGGAGATGCAGAAATGCTGATGGACGTGGAGGATGAGGACTTCAAGGCTGCAATAGCTGCTAGCTTGATGGATTCCCCAGCAGTCATGGCAGCAGGAGTTGCTAACCCCCATAATGAACCTGCCGTTTCCTTCACCCAAGCTGCCTCTCCCCAGAATAATATACCTGTTGCTTCCCATGAAACTGCCAACACTCAACATGTACCTGTTTCCCCAAAAGCTTTCACCCACCAAGATGTTCCTGCAGTTGCTCCCAAAGCTGCCACCCTCAAAGATGTACCTGTAGTTTCCACCAAACCTGCCTCCCCCCAAGACATGCCTGTTGTTACCCCTGAAGCTTCCATCTCCCAGAATGTACGTGCACTTTCCCCCGATGCAGCTGCTACCTTACATGCAGTTTCCGCCGCCAAAGCTACCACCCCCAATAATCTTACGGTCTGCACTGAAGTTGCTGTTCATAAAAACGAGCCTGCAAATGAATCTGTAGGCAATGCAGACGCTGCCTTTGATGAAAGTGGACTTGCAGATAATGCAGAATGCGCTGTTTCGAGCCCCCGAAAGAAAATTAGTCGTACGATGTGGGAGCTGTATGAGGAAGAAGAGTGCTTTCTGCCTTGAATATGATTTTTGGTTCAAGACGGATGAGAACAGGATTGACCCATTGACAAGAATAAGAGAATTTGCAGGAGAATGGGAACCTCCGGATCCTTGTTGAGCTTGAGGTTAGCTAGTTGAAGTCGAATCCATGTTTTACAGTCGTTCTGTGCAGGGTAACTATATTCACTTACTTTTTTCAATTTTCGGATTGATACTGTATAAATTCTTCAACAAATAAGCCGTCGACTTGGCCTCTGAATTGTCACAAATGTTGGATTACAGAGATGTTACTTCTTTGAAAACATTTTTAAACCTCTAAGTATCCCCCGTTACTCATGTTCAAATCAAAACATGTTATAAACTGAAACTTGTGTGTTAAGATAAGAATAGCCCCACTCGAATCTGATGATCTGAATTAATGAAGTGCTTCCAGAGTTGGTTGGTAACTCAATCAAAATACATTTTTTTATTAGGTTAGGTCGGG ATGCTTTTGCATTCTGAATGTGTGATTCTGATTATGGACGAAGCCAGCAATGGAGGGATGTTGTATCATGAGGTACAAGAATCAAAGCTCTGCGCTGTGCATTGTGTCAACACCGTGTTGCAGGGTCCCTTCTTCTCCGAATTCGATTTGGCTGCTCTGGCATACGATCTTGACCGAAAAGAACGCCAGATGATGCTTACTGGTTCCACCACCGGTGATTTTCTCTCCGAGGATTCTCACAATGTCTCCTTGGACGGTGATTTTAGCATCCAGGTATTACAAAAGGCTTTGGAGGTATGGGATCTCCAAGTCATTGCTCTCAACTCACCAGCTGCTGAACTTGCACAGATTGATCCTGAACTGGAGAGTGCATTTATTTGTCACTTGCAAAACCATTGGTTTTGTATTAGGAAAGTGAATGGGGAGTGGTACAATTTTGATAGTCTATATGCAGCCCCACAGAATCTTTCTAAGTTTTACCTTTCAGCTTACTTGGACTCTCTAAAGGGCTTCGGTTGGAGCATTTTTATTGTGAGGGGTAATTTCCCCAAGGATTTCCCCATCTCATGCTCTGAAGCATCCAACGGTTATGGTCAATGGCTTACCCCTGAGGATGCTGATAGGATAACCAAATCGTGCAACTCAACCCAAGCCCGCCCTCCTCAAGGAATAAACTGGACAAAGCCGCAAGATACGTTTCTTTCATATGGAGATGCAGAAATGCTGATGGACGTGGAGGATGAGGACTTCAAGGCTGCAATAGCTGCTAGCTTGATGGATTCCCCAGCAGTCATGGCAGCAGGAGTTGCTAACCCCCATAATGAACCTGCCGTTTCCTTCACCCAAGCTGCCTCTCCCCAGAATAATATACCTGTTGCTTCCCATGAAACTGCCAACACTCAACATGTACCTGTTTCCCCAAAAGCTTTCACCCACCAAGATGTTCCTGCAGTTGCTCCCAAAGCTGCCACCCTCAAAGATGTACCTGTAGTTTCCACCAAACCTGCCTCCCCCCAAGACATGCCTGTTGTTACCCCTGAAGCTTCCATCTCCCAGAATGTACGTGCACTTTCCCCCGATGCAGCTGCTACCTTACATGCAGTTTCCGCCGCCAAAGCTACCACCCCCAATAATCTTACGGTCTGCACTGAAGTTGCTGTTCATAAAAACGAGCCTGCAAATGAATCTGTAGGCAATGCAGACGCTGCCTTTGATGAAAGTGGACTTGCAGATAATGCAGAATGCGCTGTTTCGAGCCCCCGAAAGAAAATTAGTCGTACGATGTGGGAGCTGTATGAGGAAGAAGAGTGCTTTCTGCCTTGA MLLHSECVILIMDEASNGGMLYHEVQESKLCAVHCVNTVLQGPFFSEFDLAALAYDLDRKERQMMLTGSTTGDFLSEDSHNVSLDGDFSIQVLQKALEVWDLQVIALNSPAAELAQIDPELESAFICHLQNHWFCIRKVNGEWYNFDSLYAAPQNLSKFYLSAYLDSLKGFGWSIFIVRGNFPKDFPISCSEASNGYGQWLTPEDADRITKSCNSTQARPPQGINWTKPQDTFLSYGDAEMLMDVEDEDFKAAIAASLMDSPAVMAAGVANPHNEPAVSFTQAASPQNNIPVASHETANTQHVPVSPKAFTHQDVPAVAPKAATLKDVPVVSTKPASPQDMPVVTPEASISQNVRALSPDAAATLHAVSAAKATTPNNLTVCTEVAVHKNEPANESVGNADAAFDESGLADNAECAVSSPRKKISRTMWELYEEEECFLP Homology
BLAST of CmaCh14G000890 vs. ExPASy Swiss-Prot
Match: Q9M391 (Ataxin-3 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g54130 PE=1 SV=1) HSP 1 Score: 359.4 bits (921), Expect = 5.9e-98 Identity = 183/265 (69.06%), Postives = 213/265 (80.38%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy Swiss-Prot
Match: Q8LQ36 (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 333.6 bits (854), Expect = 3.5e-90 Identity = 173/275 (62.91%), Postives = 204/275 (74.18%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy Swiss-Prot
Match: P54252 (Ataxin-3 OS=Homo sapiens OX=9606 GN=ATXN3 PE=1 SV=5) HSP 1 Score: 159.1 bits (401), Expect = 1.2e-37 Identity = 87/252 (34.52%), Postives = 136/252 (53.97%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy Swiss-Prot
Match: Q9CVD2 (Ataxin-3 OS=Mus musculus OX=10090 GN=Atxn3 PE=1 SV=2) HSP 1 Score: 157.1 bits (396), Expect = 4.4e-37 Identity = 72/167 (43.11%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy Swiss-Prot
Match: O35815 (Ataxin-3 OS=Rattus norvegicus OX=10116 GN=Atxn3 PE=1 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.4e-37 Identity = 72/167 (43.11%), Postives = 109/167 (65.27%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy TrEMBL
Match: A0A6J1J5J2 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111481936 PE=4 SV=1) HSP 1 Score: 824.3 bits (2128), Expect = 2.4e-235 Identity = 416/429 (96.97%), Postives = 416/429 (96.97%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy TrEMBL
Match: A0A6J1F1U3 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111441397 PE=4 SV=1) HSP 1 Score: 768.1 bits (1982), Expect = 2.0e-218 Identity = 390/416 (93.75%), Postives = 394/416 (94.71%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy TrEMBL
Match: A0A5D3DN96 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G001100 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 2.6e-181 Identity = 340/422 (80.57%), Postives = 365/422 (86.49%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy TrEMBL
Match: A0A1S3B6I4 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103486329 PE=4 SV=1) HSP 1 Score: 644.8 bits (1662), Expect = 2.6e-181 Identity = 340/422 (80.57%), Postives = 365/422 (86.49%), Query Frame = 0
BLAST of CmaCh14G000890 vs. ExPASy TrEMBL
Match: A0A0A0L9Z8 (Ubiquitinyl hydrolase 1 OS=Cucumis sativus OX=3659 GN=Csa_3G732570 PE=4 SV=1) HSP 1 Score: 641.3 bits (1653), Expect = 2.9e-180 Identity = 338/422 (80.09%), Postives = 365/422 (86.49%), Query Frame = 0
BLAST of CmaCh14G000890 vs. NCBI nr
Match: XP_022983320.1 (ataxin-3 homolog [Cucurbita maxima]) HSP 1 Score: 824.3 bits (2128), Expect = 4.9e-235 Identity = 416/429 (96.97%), Postives = 416/429 (96.97%), Query Frame = 0
BLAST of CmaCh14G000890 vs. NCBI nr
Match: XP_023527477.1 (ataxin-3 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 776.9 bits (2005), Expect = 9.0e-221 Identity = 395/416 (94.95%), Postives = 397/416 (95.43%), Query Frame = 0
BLAST of CmaCh14G000890 vs. NCBI nr
Match: KAG6580493.1 (Ataxin-3-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 771.5 bits (1991), Expect = 3.8e-219 Identity = 393/416 (94.47%), Postives = 395/416 (94.95%), Query Frame = 0
BLAST of CmaCh14G000890 vs. NCBI nr
Match: XP_022934132.1 (ataxin-3 homolog [Cucurbita moschata]) HSP 1 Score: 768.1 bits (1982), Expect = 4.2e-218 Identity = 390/416 (93.75%), Postives = 394/416 (94.71%), Query Frame = 0
BLAST of CmaCh14G000890 vs. NCBI nr
Match: KAG7017246.1 (Ataxin-3-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 764.6 bits (1973), Expect = 4.6e-217 Identity = 390/414 (94.20%), Postives = 392/414 (94.69%), Query Frame = 0
BLAST of CmaCh14G000890 vs. TAIR 10
Match: AT3G54130.1 (Josephin family protein ) HSP 1 Score: 359.4 bits (921), Expect = 4.2e-99 Identity = 183/265 (69.06%), Postives = 213/265 (80.38%), Query Frame = 0
BLAST of CmaCh14G000890 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein ) HSP 1 Score: 57.8 bits (138), Expect = 2.6e-08 Identity = 41/153 (26.80%), Postives = 70/153 (45.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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