CmaCh14G000600 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATTCCCAAAGCCCGGCAAAGTAATTTCTCGAGGACAAGTTTAGCCTTCAATAGGCTTCATATTTTCGTTTGGAAGTGTTGCCTTTCCCCCAAAGCATTTCACCTTCGTCTCTCGTGGACTTCGAGTTTCTGATTCTTGAGAGCTTTGCATCGTTGATCCCGATGGATCGAACTCAGATAGTTCTGTTAGGTCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACGCCTCCGCCTCCTAAACCTGTCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGGTTAATGATTTCATGTTTGATTGGACATTTCTTGAATTTTGTTATTATTTTTTATATTCTACAACTTAATTTTTCGTCTCGTTTTGGATTGCAGAAACGGAGTGGAATCGGAGAAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTTCAGGTAGTTCATCGTCTTGATTGCCAATTTTTGTGTTTATTTGTCTCATTTTGGGCGGGAAGTGAGCGAATCAAACGTTTATGTGACTTTCCTTTCTTGTGTTTTTTTCTCCTCCATTTTTCATCGACTCTGATCACGCATCATATTGCGGTAAACTTATAGTGAAGGAGAATCTGATTGTTGTGTGTTTGTTTTTCCTTAGCACACGTTTCTTTGATTATCGTTAACTTCCTCGATTGAACGAACATTTTTTGTTCTCAGTGTAGGTCTCTTTTGTTATTGTTAACTTCCTTCGTCGATTAAACAAACGTTTCGACTTCTCTACCTTCTAGTAGTTGTTATTTTAGAACATTAAATCTCCAGTCGGTTGTACTTCGGAGTTTTGCCTCTTCTTTTAAACACGATTTCTTTGTTTTTTTCCCCCTATAAGTCCAGGTTTCTTTTACCTTTAACTTCCTCGATTAGTTATCATTTCGATTTCTCTACTATCTAGTGATTGCTGAGAGTCATTATGATGAAAAATTAGTTATACTTTGGAATCTTTCTTGTTCCTTTGATCTTGATTTTTTTTTCCTCACCTTTGATTAGCACGGATTTCTTTTATTACCCTAACATCCTCGATTGAACTATTATTTTGACTTCTCCCCACCTTCGTGGTCGGTTGGAGTCATCATCATGAAAAACAGGCCGAGTCTGCTTCACTGTTGTTGTTCAGTTAATCATGATTTCTTAGCTTATTTTAATCACAACATTGTTAGCTTCCTCAGTTGAACAAATATTTCAGTTCCTCTACTCTCTAGCAGCTGTTGAATTCATAGTCATTATAATAAAAAGTTTGTTGTATTCTTCTTCACTGTTGTTGTTCCTCTGTTAATATGCTTGTTCTTGTTCAAGATAAGAGTGCTGAACGAACATAATTGCATACATATGGAAACAATTTGTAATAAATTTCCATATGGAGCCAACTTCTCTATGTTAGGTTGTCTGAGATGGAGCAAGGCATAGCATAAAAACGTAGGTTTCAATTGACTTCAGCTGTTTGAGAGCCTATAAAATGAACTTACTTATAGCATGCTTTAGTGTTGCATTGATAAGCAACTTCAGTAGATTATGCCTTGCAAGTTAATTTTCATTTAGGTTTAGAAACAGTTTAACGTTTCAAACTCCCCAATGGGATAAAAAATGAACTGGATTGTGAAAGATAGAATTTTGGTCTCTACTCATACAGCATAAGAATCGAGCACAAGTCTAATTAGAGTAGCATTTACCAAATTACCTTCTTGTTTTTACACGATATTATTGAAAAATAATTTCACTCGTGATTCCAAGTTGGCCAATAAATGATCCAATGTTCTTCATGGAATAAATATCATATATTTCTTTACTTGTATTTACGAAGCATCGGACAGGCACTTAAATAATGGTGTTAGTTATTATGCTAAGTTTGTGGGTAGATTTCACCGTAATCCGTAATTATCTTTCTGCGTGAACTATGATATTTGCTCCAGATTCCACCCCCCCACTACAAATAGGAAATGTTCAGAAGCTGTGTGCTTGCGTTTGATCTATATGTTTTGGGGCTGTCTCTTTAAAATGTAGTAGTACTGCCATGTTATCTCAATTTGTGGAAATGCTTGCTGTGAAATGATTTTACACTTACTGTGGCAGAGGTACTGCGATAAACATGAAAAATATGCTGGAGTTGTCGTTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCGCCACTCCCAAAGCGCCTTCTTAGTAAAGTAGTACCCGTCGTTCAGTTTGGAGTTATTGGAATAATAACGGCAGGGGAACACATTTTTCCTAGGTTGGGGATGGCACCGCCACCTTGGTACTATTCATTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTATTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAACGGTGAAATGGTAAGATTCTTTTGAAACCTTATTCTGGTTTCTTTTTTTTTTTTTTTGGGTAAGATGACTGTTGACCGATATTATCTGTTTTCTGAAGGTATTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACCTTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACGCCGGAGGAGTTTGGTCATAG ATTCCCAAAGCCCGGCAAAGTAATTTCTCGAGGACAAGTTTAGCCTTCAATAGGCTTCATATTTTCGTTTGGAAGTGTTGCCTTTCCCCCAAAGCATTTCACCTTCGTCTCTCGTGGACTTCGAGTTTCTGATTCTTGAGAGCTTTGCATCGTTGATCCCGATGGATCGAACTCAGATAGTTCTGTTAGGTCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACGCCTCCGCCTCCTAAACCTGTCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGAGTGGAATCGGAGAAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTTCAGAGGTACTGCGATAAACATGAAAAATATGCTGGAGTTGTCGTTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCGCCACTCCCAAAGCGCCTTCTTAGTAAAGTAGTACCCGTCGTTCAGTTTGGAGTTATTGGAATAATAACGGCAGGGGAACACATTTTTCCTAGGTTGGGGATGGCACCGCCACCTTGGTACTATTCATTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTATTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAACGGTGAAATGGTATTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACCTTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACGCCGGAGGAGTTTGGTCATAG ATGGATCGAACTCAGATAGTTCTGTTAGGTCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCTTTTCACGCCTCCGCCTCCTAAACCTGTCAATCATCCTCCACCTCGAGTTCACTACCAGCCTAAATCTCAACCAGTCATCCAGGAACCGCTTGAATTTCCTACGGAGAAACGGAGTGGAATCGGAGAAATTGGCCAGGGCAGCGTTATTAATATCAATTTCTGTGTTTCTTGTTCTTTCAGAGGTACTGCGATAAACATGAAAAATATGCTGGAGTTGTCGTTTCCTGGAGTTGAAGTTATTTTGGCAAATTACCCCCCGCCACTCCCAAAGCGCCTTCTTAGTAAAGTAGTACCCGTCGTTCAGTTTGGAGTTATTGGAATAATAACGGCAGGGGAACACATTTTTCCTAGGTTGGGGATGGCACCGCCACCTTGGTACTATTCATTGCGTGCAAATAGGTTTGGAAGCATTGCAAGCACTTGGCTATTTGGAAATTTTATCCAGTCATTCTTACAAAGTTCTGGAGCCTTCGAAGTATATTGCAACGGTGAAATGGTATTTTCTAAGTTGAAGGAGCAGAGATTTCCTGGTGAGATTGAGTTGAGAGACCTTATTGGAAGGAAACTTTCTGGGTCGAGATTTGTTGACAACGCCGGAGGAGTTTGGTCATAG MDRTQIVLLGLPIFLLFTDIVNLFTPPPPKPVNHPPPRVHYQPKSQPVIQEPLEFPTEKRSGIGEIGQGSVININFCVSCSFRGTAINMKNMLELSFPGVEVILANYPPPLPKRLLSKVVPVVQFGVIGIITAGEHIFPRLGMAPPPWYYSLRANRFGSIASTWLFGNFIQSFLQSSGAFEVYCNGEMVFSKLKEQRFPGEIELRDLIGRKLSGSRFVDNAGGVWS Homology
BLAST of CmaCh14G000600 vs. ExPASy Swiss-Prot
Match: Q9STZ2 (SelT-like protein OS=Arabidopsis thaliana OX=3702 GN=At3g47300 PE=2 SV=2) HSP 1 Score: 280.0 bits (715), Expect = 2.3e-74 Identity = 138/209 (66.03%), Postives = 167/209 (79.90%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy Swiss-Prot
Match: Q9BN19 (Putative esophageal gland cell secretory protein 6 OS=Heterodera glycines OX=51029 GN=HSP6 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.7e-19 Identity = 46/142 (32.39%), Postives = 79/142 (55.63%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy Swiss-Prot
Match: Q19892 (Thioredoxin reductase-like selenoprotein T homolog selt-1.2 OS=Caenorhabditis elegans OX=6239 GN=selt-1.2 PE=2 SV=2) HSP 1 Score: 81.6 bits (200), Expect = 1.2e-14 Identity = 41/145 (28.28%), Postives = 74/145 (51.03%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy Swiss-Prot
Match: Q9U3N5 (Thioredoxin reductase-like selenoprotein T homolog selt-1.1 OS=Caenorhabditis elegans OX=6239 GN=selt-1.1 PE=2 SV=2) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 39/142 (27.46%), Postives = 70/142 (49.30%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy Swiss-Prot
Match: Q9VMV6 (Thioredoxin reductase-like selenoprotein T homolog CG3887 OS=Drosophila melanogaster OX=7227 GN=SelT PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.3e-13 Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy TrEMBL
Match: A0A6J1IZR1 (selT-like protein OS=Cucurbita maxima OX=3661 GN=LOC111482133 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-126 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy TrEMBL
Match: A0A6J1F5S6 (selT-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442401 PE=4 SV=1) HSP 1 Score: 454.9 bits (1169), Expect = 2.0e-124 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy TrEMBL
Match: E5GBE6 (Selenoprotein t OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118 Identity = 213/227 (93.83%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy TrEMBL
Match: A0A5D3DMW2 (SelT-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G00710 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118 Identity = 213/227 (93.83%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. ExPASy TrEMBL
Match: A0A1S3B6A1 (selT-like protein OS=Cucumis melo OX=3656 GN=LOC103486285 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.1e-118 Identity = 213/227 (93.83%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. NCBI nr
Match: XP_022983567.1 (selT-like protein [Cucurbita maxima]) HSP 1 Score: 462.2 bits (1188), Expect = 2.5e-126 Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0
BLAST of CmaCh14G000600 vs. NCBI nr
Match: XP_022935564.1 (selT-like protein [Cucurbita moschata] >XP_023527743.1 selT-like protein [Cucurbita pepo subsp. pepo] >KAG6580468.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017218.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 454.9 bits (1169), Expect = 4.0e-124 Identity = 223/226 (98.67%), Postives = 223/226 (98.67%), Query Frame = 0
BLAST of CmaCh14G000600 vs. NCBI nr
Match: XP_008442408.1 (PREDICTED: selT-like protein [Cucumis melo] >ADN33788.1 selenoprotein t precursor [Cucumis melo subsp. melo] >ADN34273.1 selenoprotein t [Cucumis melo subsp. melo] >KAA0044178.1 selT-like protein [Cucumis melo var. makuwa] >TYK24955.1 selT-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 434.9 bits (1117), Expect = 4.3e-118 Identity = 213/227 (93.83%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. NCBI nr
Match: XP_038903844.1 (selT-like protein [Benincasa hispida] >XP_038903845.1 selT-like protein [Benincasa hispida] >XP_038903846.1 selT-like protein [Benincasa hispida]) HSP 1 Score: 433.3 bits (1113), Expect = 1.3e-117 Identity = 214/227 (94.27%), Postives = 218/227 (96.04%), Query Frame = 0
BLAST of CmaCh14G000600 vs. NCBI nr
Match: XP_004137713.1 (selT-like protein [Cucumis sativus] >KGN58749.1 hypothetical protein Csa_001631 [Cucumis sativus]) HSP 1 Score: 426.4 bits (1095), Expect = 1.5e-115 Identity = 210/227 (92.51%), Postives = 214/227 (94.27%), Query Frame = 0
BLAST of CmaCh14G000600 vs. TAIR 10
Match: AT5G58640.1 (Selenoprotein, Rdx type ) HSP 1 Score: 296.6 bits (758), Expect = 1.7e-80 Identity = 144/218 (66.06%), Postives = 177/218 (81.19%), Query Frame = 0
BLAST of CmaCh14G000600 vs. TAIR 10
Match: AT5G58640.2 (Selenoprotein, Rdx type ) HSP 1 Score: 291.2 bits (744), Expect = 7.2e-79 Identity = 141/217 (64.98%), Postives = 173/217 (79.72%), Query Frame = 0
BLAST of CmaCh14G000600 vs. TAIR 10
Match: AT3G47300.1 (SELT-like protein precursor ) HSP 1 Score: 280.0 bits (715), Expect = 1.7e-75 Identity = 138/209 (66.03%), Postives = 167/209 (79.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|