CmaCh14G000410 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh14G000410
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr14: 179607 .. 184207 (-)
RNA-Seq Expression	CmaCh14G000410
Synteny	CmaCh14G000410

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCAGCTTTCATTTATCCTATCGCTCCGCCTGAAACATCGAATGAAGCGAAGAAGAATCCTCTGAAGCTCAGGAGGGATAGCGCCGTCAATGGCGGTTCCGTTTCTGATGAACTGCCGAACCGGTGATTCCTCCGCCGCGGCGCTATCCATCCTGAGTTTCATCGGTTCTCCTTGCTCTGCTATCACCGTCTTTACAATGTAGTCTACAGAAACAGAGCAATGGCAAGTGTGAGAACCGACGACGAAAGGAGAAGTGAGTATTTTACTATTATTCTGTCTCGAAAGTTGATTTTCATAATATTCTATCCGATGAATCGTTTTCTGAGTGAAATTTTAGATTTTTTTTTTTTTAATTTTCTTTAGAATTGGTTTGGGTTAGGTTAGGTTCATAGCTTAACAAAGATTGTTCATTATAAAAATTTGCAATTCATCAAACAATTAGGTTAAGTCCAAATATCACAAAATCCAATAGCTCTGGCGCGAGGGTTAGGATGATGTCGCTTTCTTGCTTTATAGTGGGTGAAATGTGAGGCAAAATCTTCGCACCGTATCTTTGCTATTTTGGAACCTTCTGATATTTTCTTCGCAGATAGTAGAAAACCATATGCTTTTTGCCTCTCTCAAGTCCTTTTCTCAACAAGGCCTCATGACAAATGCAGTCATAATCAGTCGTCGATGGGGCAAAATACTTCGCGCCATTTTTGGCACCAATGGAAAAAAAAAGTGAGGAACACTGTTTTCTTGTCGCTGGCCCCGCAACACTTACTGTCAGTAGAAAAAGGAAACAGTAAAAAGGAGGTTAAAGAAACACTTTTAAGCTTTGAATATGGGTTAGACCAAGGACAATTAGCCAATTAATCTGAGAGTGCTACAGGTGAATTTGAGCTCGATTAACTTTAAGGGATTGATCAGATAATTGACTGTGACTGATATTTTTTATAAATAGTTTCATGGTTTGAATTGGTTCAGTTCCCTCAGATCTTGATCAAGAGGAACATTGAGGCCGACAATGCTATTATGATTTTGCAGCTACATATGATAGGTTTGATCCGGAATTCCATGGCGATTCGTAGCCGGAGATTGCAGCTGAGCAACAGAACTCGTGGGACGATACAAATGAAGAGAAACACATCTCCAATTGAATTATGTAAGCCAACTTAATGCGGTATTTGCCATGAGATTAATCTTTTCTATTAACAGGAAAAAAATGAATGAAAAACAGAAACTCACAATCAGCTTAAAATACATTACACAGAAGGGTCGTATTATACTTGTATCTCATCAACAATAAATATGCACTTAGAATCAATATGAATAAAAGAATAATTCAATTACTAACTGGCCAAAAATAAAAGAATAACAACGCTTCTCTAATCTCCACTGTACTATACCAAATACAATAACAATACCTCTATGTTCTTCCCATCTTGGCGGTAATCTATAATTCTCTCTCTATATGCAGCTCTATTCAGTTGCTGGTTGAGTTTTGGCGCTATCCTCACCAGAAGTAGAAGTCTTAATTTCTTCCAGTTGCTGGAGAATTTGCTGAATGTCCGGCCGAGCAGCTGGTGATGGATCGACACAATGCAGGGCTAGTTTTAAGGTGTTCAGCAGTTCATCACCAATATTTGGTGCGTCTTTCATAAGCTCCAGATCAAACACTTCATTTGTCCACTCCTCCTTTACTATTGAGGCCACCCACTGAGGTAAATCCATTCCATCCATGGCTTCTCCAGGAGATTTTCCTGTCAAAAGTTCCAATATTATGACTCCAAGGCTGTAGACATCTGTCTTTGTTGTGGTTTTTTTGGTTTTTGTTAGCTCTGGTGCATTGTAGCCCTGTGTTCCTGCAGTGGCAATCACATTTGTGGCTGCAGCTGAAGTCATGAGCTTAGGAAGCCCAAAATCTGCAATGCGAGCATTGGTCTGATCATCCAGCAGAATGTTGCTGGACGTGAGGTACCCATGAATTAGATTCTCCTCTGTGTGGAGGTAGTTCAAGCCTTGCGTGATTCCGATCGCTATTTTCATCCTCATTGGCCAATCGACCGTGGTTTCCGGCCCGCGAGCTGCGTACAGGAACAAAAGTCAGTATATGAGTTATGAATATACCCTTAAATAGATCAATAACCTCTTTCTGAAGTCGTAGCAGCCAATGGTTGAGTTTACTTACCATGAAGGAAGGAAGATAGACTTCCTCGAGGCATGTAATCAAAGACAAGAAGCTTCTCTCCTTTGGGGCCTATGTAGTAAGCTCTAAGAGCAAGTAGATTTGGGTGTCTAATTTTTCCTAGTGCCACAACTTCAGTTTCAAATTCCTTCTGCCCTTTTGTTGTTTTTTCCCTCAATCTTTTCACTGCAACTTCATTACCATCTTCTAATGTTGCTTTATATGCTGTTCCATATGTACTCTTTCCCATGATCTCCGCAGTCGCACACAGAAGATCATCAGCAGTGAAAACAAATGGCCCATCAAAATGAACTAGTTTTCCTCCGGCTTCGCCCGTCCCCACTTCGGTGCTGCCTGGTGCTTCCTTCTCGATGCTTCTCGCTGTCGCTTGCTTGCCAGCCGTTTTGTCATTCTTTCTAGCAGCAGCTCTTTTTGATAACAAACAACAGAGCAAAATTGAGCAGAGAAGAAGAAGAAGCACCAACAGAGCTCCAGCGGCTATCAGAATTATGTCCTTCACACTGAGTTTGCGGCGGCGATGCGGTTTCCGGACCTCAGATGATGGAGTTGTAATATTCTGTGGAGAGGATGCAGGTTGACATGGAGTTGAAGCACTAAAACCACACAGTTGAAGGTTCCCTACAAAAGAGCTCGCATTGAACTTATTTGATAGGAGAACCGGGACAGGGCCAGAGAGATTGTTGTAAGAGACGTTGAAAGAGGTCAGATTCAACAAACTGGTCAGCGATGTTGGTATCTGTCCCGTGAAGTTATTTTCAGAGAAATCAAGTTGGGTAATAGCAGAAATGTTCCCCAAACTTGCAGGAATCTCACCACTAAATCGATTCTTCCCAAGCTTGACCACTGAGAGATTCTGCAATCTATCAATATCTCCTGGAATCTGGCTTTCGAGGCGATTATTTTCAACATTCAATAATTCAAGAGAGGATAGATTAGAGAAACTTGAAGGGAAGCCACCATTAATGGCGTTGTTCGACAGATCCAAAAGGCGAAGTCTCTTCAGCTTGCCTATTCCACCCGGTATAGCCCCAGAGATCTTGTTTTCACTGATGGAAATCTCTTGAAGCCATTCCAGTTTACTCAAGGAAGCTGGAATTGCCCCAGATATTACATTATGATCAAGCGTTATAACAGCAAGTGGGCAAGTTCGACCACCCCAAGAATCTGGGACGGTCCCAGAAATATTATTGTGCTGAAGGGCGAGAATTGTAAGAGAAAACGACTGCGTAAAGCTACTTGGGATAGATCCCGACAATGAATTGTAACTCAGATTAACTCTAATCAATTTGGTAGAATTTGCTAGACCAGAAGGAATTTCTCCTGTGAGCAAATTGTTGCTCAAATCAAGAGTTTGAAGAAGGGGAAGATTACCAATTGTAGGAGGAATAGAACCTGAGAATCTGTTGTTGAAAAGATAAATTCCTCTGAGATTTGGAAGGAGGCCGAGCGACCGAGGGACTGTGCCGGAGATCACATTATCGTGGAGGCTGAGCTTTCTAAGTTCCCGGAGCTGCCCAATCCTGTCGGAAATCCGGCCGGCAAGAGCCTTCCATGGAAGCTGTATAGCAATGACCTGCCCCTTCACACACTTGATTCCTGCCCACTGCCCGGAACAAGCTCCAGTACTGCCATTCCAGCTACGCAAAGCTCCTTTAAGGTCGATGAGTTCGTGTTTTATAGCTTGAAGAGCTTGAAAATCTCCTTGTGTAACAGCCACTCCGTCCCACATCTGGCCAGTGACCGGTTGAAGGGAAAAAGCCAAAAGATGAGCAAAAAAGAGAGCAGTCAGGTATGAAGAACAGCTTCTCCATTGTTGGCCCTTCCACTTTCTGCTCTTATTAGGTGATTTAGAGCCCCAATCAGCTGTTATTGCTACGGGAAACTGCATGAACTGAAGTGGGTTTACCTGAAACTCACTCAGAGGGTTGTGGGTTTTTCCCATGAACAAAAAGAAACTTCAGTTTAAGAGGGAAAACAGAATGGCTTTTCGTATCTCTGGTTATTCTAGGGTTTCTGAAAGTTGGGACGATAAGTTTTATAGGGGAAGAAGATGAAGAAGAAAAATAAATTAGATTAGCAGAGAGAAAGGAGTTGGTCTGGGTCTGATGAAGCATGTGAGGACCTGAAATGTCGTTGTAATTTTGGGTGGACGAAGGATTTAGCGAAGGCATACGCTGGGGTCAGTCTCTTTATTCTTTTACGCTAACGGCTACATTTTTCTTCGGTTATTCAGGCTACGTGACATTTTTTTTTTCCTTTGCTTCTGTAACGCTTTGTCGCTCCTCCAACGGCTATATTTGATTCGGTCAGCATATTAGGTGGATAAATGTATAATGAGAGTTATAACGTACGTCCTGCCACTTGCGCTACATTATTTCTGATTTTTAATAATAATACATAAACT

mRNA sequence

ATGGCTGCAGCTTTCATTTATCCTATCGCTCCGCCTGAAACATCGAATGAAGCGAAGAAGAATCCTCTGAAGCTCAGGAGGGATAGCGCCGTCAATGGCGGTTCCGTTTCTGATGAACTGCCGAACCGAAACAGAGCAATGGCAAGTGTGAGAACCGACGACGAAAGGAGAACTACATATGATAGGTTTGATCCGGAATTCCATGGCGATTCGTAGCCGGAGATTGCAGCTGAGCAACAGAACTCGTGGGACGATACAAATGAAGAGAAACACATCTCCAATTGAATTATCTCTATTCAGTTGCTGGTTGAGTTTTGGCGCTATCCTCACCAGAAGTAGAAGTCTTAATTTCTTCCAGTTGCTGGAGAATTTGCTGAATGTCCGGCCGAGCAGCTGGTGATGGATCGACACAATGCAGGGCTAGTTTTAAGGTGTTCAGCAGTTCATCACCAATATTTGGTGCGTCTTTCATAAGCTCCAGATCAAACACTTCATTTGTCCACTCCTCCTTTACTATTGAGGCCACCCACTGAGCTCTGGTGCATTGTAGCCCTGTGTTCCTGCAGTGGCAATCACATTTGTGGCTGCAGCTGAAGTCATGAGCTTAGGAAGCCCAAAATCTGCAATGCGAGCATTGGTCTGATCATCCAGCAGAATGTTGCTGGACGTGAGGTACCCATGAATTAGATTCTCCTCTGTGTGGAGGTAGTTCAAGCCTTGCGTGATTCCGATCGCTATTTTCATCCTCATTGGCCAATCGACCGTGGTTTCCGGCCCGCGAGCTGCGTACAGGAACAAAAGTCAGTATATGAGTTATGAATATACCCTTAAATAGATCAATAACCTCTTTCTGAAGTCGTAGCAGCCAATGGTTGAGTTTACTTACCATGAAGGAAGGAAGATAGACTTCCTCGAGGCATGTAATCAAAGACAAGAAGCTTCTCTCCTTTGGGGCCTATGTAGTAAGCTCTAAGAGCAAGTAGATTTGGGTGTCTAATTTTTCCTAGTGCCACAACTTCAGTTTCAAATTCCTTCTGCCCTTTTGTTGTTTTTTCCCTCAATCTTTTCACTGCAACTTCATTACCATCTTCTAATGTTGCTTTATATGCTGTTCCATATGTACTCTTTCCCATGATCTCCGCAGTCGCACACAGAAGATCATCAGCAGTGAAAACAAATGGCCCATCAAAATGAACTAGTTTTCCTCCGGCTTCGCCCGTCCCCACTTCGGTGCTGCCTGGTGCTTCCTTCTCGATGCTTCTCGCTGTCGCTTGCTTGCCAGCCGTTTTGTCATTCTTTCTAGCAGCAGCTCTTTTTGATAACAAACAACAGAGCAAAATTGAGCAGAGAAGAAGAAGAAGCACCAACAGAGCTCCAGCGGCTATCAGAATTATGTCCTTCACACTGAGTTTGCGGCGGCGATGCGGTTTCCGGACCTCAGATGATGGAGTTGTAATATTCTGTGGAGAGGATGCAGGTTGACATGGAGTTGAAGCACTAAAACCACACAGTTGAAGGTTCCCTACAAAAGAGCTCGCATTGAACTTATTTGATAGGAGAACCGGGACAGGGCCAGAGAGATTGTTGTAAGAGACGTTGAAAGAGGTCAGATTCAACAAACTGGTCAGCGATGTTGGTATCTGTCCCGTGAAGTTATTTTCAGAGAAATCAAGTTGGGTAATAGCAGAAATGTTCCCCAAACTTGCAGGAATCTCACCACTAAATCGATTCTTCCCAAGCTTGACCACTGAGAGATTCTGCAATCTATCAATATCTCCTGGAATCTGGCTTTCGAGGCGATTATTTTCAACATTCAATAATTCAAGAGAGGATAGATTAGAGAAACTTGAAGGGAAGCCACCATTAATGGCGTTGTTCGACAGATCCAAAAGGCGAAGTCTCTTCAGCTTGCCTATTCCACCCGGTATAGCCCCAGAGATCTTGTTTTCACTGATGGAAATCTCTTGAAGCCATTCCAGTTTACTCAAGGAAGCTGGAATTGCCCCAGATATTACATTATGATCAAGCGTTATAACAGCAAGTGGGCAAGTTCGACCACCCCAAGAATCTGGGACGGTCCCAGAAATATTATTGTGCTGAAGGGCGAGAATTGTAAGAGAAAACGACTGCGTAAAGCTACTTGGGATAGATCCCGACAATGAATTGTAACTCAGATTAACTCTAATCAATTTGGTAGAATTTGCTAGACCAGAAGGAATTTCTCCTGTGAGCAAATTGTTGCTCAAATCAAGAGTTTGAAGAAGGGGAAGATTACCAATTGTAGGAGGAATAGAACCTGAGAATCTGTTGTTGAAAAGATAAATTCCTCTGAGATTTGGAAGGAGGCCGAGCGACCGAGGGACTGTGCCGGAGATCACATTATCGTGGAGGCTGAGCTTTCTAAGTTCCCGGAGCTGCCCAATCCTGTCGGAAATCCGGCCGGCAAGAGCCTTCCATGGAAGCTGTATAGCAATGACCTGCCCCTTCACACACTTGATTCCTGCCCACTGCCCGGAACAAGCTCCAGTACTGCCATTCCAGCTACGCAAAGCTCCTTTAAGGTCGATGAGTTCGTGTTTTATAGCTTGAAGAGCTTGAAAATCTCCTTGTGTAACAGCCACTCCGTCCCACATCTGGCCAGTGACCGGTTGAAGGGAAAAAGCCAAAAGATGAGCAAAAAAGAGAGCAGTCAGGTATGAAGAACAGCTTCTCCATTGTTGGCCCTTCCACTTTCTGCTCTTATTAGGTGATTTAGAGCCCCAATCAGCTGTTATTGCTACGGGAAACTGCATGAACTGAAGTGGGTTTACCTGAAACTCACTCAGAGGGTTGTGGGTTTTTCCCATGAACAAAAAGAAACTTCAGTTTAAGAGGGAAAACAGAATGGCTTTTCGTATCTCTGGTTATTCTAGGGTTTCTGAAAGTTGGGACGATAAGTTTTATAGGGGAAGAAGATGAAGAAGAAAAATAAATTAGATTAGCAGAGAGAAAGGAGTTGGTCTGGGTCTGATGAAGCATGTGAGGACCTGAAATGTCGTTGTAATTTTGGGTGGACGAAGGATTTAGCGAAGGCATACGCTGGGGTCAGTCTCTTTATTCTTTTACGCTAACGGCTACATTTTTCTTCGGTTATTCAGGCTACGTGACATTTTTTTTTTCCTTTGCTTCTGTAACGCTTTGTCGCTCCTCCAACGGCTATATTTGATTCGGTCAGCATATTAGGTGGATAAATGTATAATGAGAGTTATAACGTACGTCCTGCCACTTGCGCTACATTATTTCTGATTTTTAATAATAATACATAAACT

Coding sequence (CDS)

ATGGCTGCAGCTTTCATTTATCCTATCGCTCCGCCTGAAACATCGAATGAAGCGAAGAAGAATCCTCTGAAGCTCAGGAGGGATAGCGCCGTCAATGGCGGTTCCGTTTCTGATGAACTGCCGAACCGAAACAGAGCAATGGCAAGTGTGAGAACCGACGACGAAAGGAGAACTACATATGATAGGTTTGATCCGGAATTCCATGGCGATTCGTAG

Protein sequence

MAAAFIYPIAPPETSNEAKKNPLKLRRDSAVNGGSVSDELPNRNRAMASVRTDDERRTTYDRFDPEFHGDS

Homology

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BLAST of CmaCh14G000410 vs. NCBI nr
Match: KAG6580452.1 (hypothetical protein SDJN03_20454, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 129.0 bits (323), Expect = 1.6e-26
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = 0


Query: 1  MAAAFIYPIAPPETSNEAKKNPLKLRRDSAVNGGSVSDELPNRNRAMASVRTDDERRTTY 60
          MAA FIYPIAP ETSNEAKKNPLKLRRDSA+NGGSVSDELPNRN+AMASVRTDDERRT+Y
Sbjct: 1  MAATFIYPIAPSETSNEAKKNPLKLRRDSAINGGSVSDELPNRNKAMASVRTDDERRTSY 60

Query: 61 DRFDPEFHG 70
          DRFDPEF G
Sbjct: 61 DRFDPEFRG 69

The following BLAST results are available for this feature:

BLAST of CmaCh14G000410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G000410 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh14G000410 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6580452.1	1.6e-26	91.30	hypothetical protein SDJN03_20454, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh14G000410 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh14G000410.1	CmaCh14G000410.1	mRNA