CmaCh13G011380 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G011380
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	cyclic dof factor 3-like
Location	Cma_Chr13: 8406675 .. 8408886 (+)
RNA-Seq Expression	CmaCh13G011380
Synteny	CmaCh13G011380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCTTCAACTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGCACACAAAATTATGTTGGATTGTAAGGATCCTGCTATTAAGCTTTTTGGCCGGAATATCCCTCTTTCCGACGACGTTGAAGCTCCGGCGGTTCATTCCCATGACTTCAGTTCTGAGAAACATGCAGAACCCAGGAAGGTACAGAGTGCCTTACACATATCACACTCTCTTGTTCCTTCATCCAACTGCTACCCATTTCACCAATTGGTCAAACAAAATCTGGGTCGTTTTTACTTTTTCACTTCCGTTTCTGCTACCTGGGTGCTTCTGAAGAAAGCCCACTTTTTTTCTTCTCTGTTTTTACTTTTGGTTGATTATGAACCCCTCGAGTCTTTTTCTTTTTCATCTGCAATTTAATTTTTTTTTTTCTTTTCCTCATCTTTTCAATTAGTTTTCCAATCATGACAGAAAAAAGTTACTAATTTACTCGAAAAAGGAAATAAAAGGGTTTTTTTTTTTTTCTCATTGTCAAACTTCAGCTCTACCTCAATTGGGATTTTAACAACGGACTAAACAGAAACTAGATTGACTTAATTTGACAAGTCATAGTTCATAAAACTTTGTTCCTTTTCTGGATTTCAGGACGCAAGCGTAGATGATCTTGAGAAACCTGTTGATGGCTCAGATGATTCAAGAAATCTGGAGTGCGGGCAAGAGGGAAGCGTGAATCCCAAAACGCCGTCTATAGATGAAGAAACTGCGAGACCCATTAATGGAGAACCAGAGAGTGAAAGGCTTAATTCAGAGAGAACCCCAAAGAAACCTGATAAATTGCTTCCATGTCCTCGCTGCAAAAGCATGGACACAAAGTTTTGTTACTACAACAATTACAATGTCAATCAACCTCGCCATTTTTGTAAGGCTTGTCAAAGATACTGGACCGCTGGAGGCATCATGAGGAACGTGCCGGTTGGAGCCGGTCGCCGGAAGAGTAAAAACTCTGCTTCTTATTACCGTCACATCACAATCTCTGAGGCTCTTGAAGCTGCTGAAATTGAGGCTTCAAATGGAACCCACAAACCAAAATTCATTGGTAACTGTGGCAGAGTCCTCAGTTTCAATTTGGATGCACCCAGTTCTATCCCTAAAGGGTGTGATAAAAGCTCGAGTTTGTCCTCTATGGCAGTTCAAACACCATCAGAATTGAAAACCAACGGCTTCCCTTCTCAAATTTCTTGTCTTTCTGGAGTTCCGTGGCCTTTGGTTTGGAATTCAACAGTTTCTCCACCCTTCGGCCCTCCAGGATTTCCCTTTTCTTTTCTTCCAGCAACTACTTGGAGCTGTGGGGTTCCAGGACCATGGAACACCCCGTGGTTTTCACCACAAGATTCCACAGAACAAAAATCTAAAGCTTCTCCAACACTGGGAAAGCATCAAAGAGACAATGAAATGGCGAAAGAAGATGCCATTTCAAGTAAAGAAGAGGGGGTTAAGCAGAGAAATGGATGTGTATTAACCCCAAAGACTTTAAGGATTGATGACCCAAGTGAGGCTGCAAAAAGTTCCATATGGGCAACGCTTGGGATAAAGAATGAATCAATGAGTGGGGGAAGAAATCTGTTCAAACCCTTTCAACCCAAGGGCCACGAGAAGGTTCCTGTTTCTAAAAACGCCTCAGTGTTGCAGGCAAACCCTGCAGCCTTTTCGAGATCTCTCGTCTTTCATGAGAGCTCTTGAAGGCAGATTATATGATTATTCCCCGTTTAAGCGTTTACAGGTATTTGCCTAATTTACATAGCCATGCAGATTGCTGAGCTTCCTTCTTAAGCCTTGTAATGTACAGAGATATATGAAATACTGACATAGATCGTAGAAACTTGGGTTGTTTGTGGTGCCGTCTTATCTGTTTTTGTTGCATTTTTTATGAGTGAGTCGATGTATAAACCTGAGACAGCCACATGGGCACTGCAGAGAGTATCTTCCAAAAAGTTGAGAAATGGAGAAAAGAGTGGAAAGGCAATTATAAGCAACAAAAGGTGATCCTACTGTGTGGCTTTATGCAGCGCCAAAGCACCAAAACTCCTTATCACAACAGCTGTAACAGGATAAGATTGAGAAAGCAGATAGTCCATCTCTTTTCTTTTCTTTTCACTTCATTTCATTTCCTGCTGTTTTTAAGTCGCAACTAATAATAGGGCAAAGGCCAAAGGGAGATATTTAG

mRNA sequence

TTCCTTCAACTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCTTCTAGCACACAAAATTATGTTGGATTGTAAGGATCCTGCTATTAAGCTTTTTGGCCGGAATATCCCTCTTTCCGACGACGTTGAAGCTCCGGCGGTTCATTCCCATGACTTCAGTTCTGAGAAACATGCAGAACCCAGGAAGGACGCAAGCGTAGATGATCTTGAGAAACCTGTTGATGGCTCAGATGATTCAAGAAATCTGGAGTGCGGGCAAGAGGGAAGCGTGAATCCCAAAACGCCGTCTATAGATGAAGAAACTGCGAGACCCATTAATGGAGAACCAGAGAGTGAAAGGCTTAATTCAGAGAGAACCCCAAAGAAACCTGATAAATTGCTTCCATGTCCTCGCTGCAAAAGCATGGACACAAAGTTTTGTTACTACAACAATTACAATGTCAATCAACCTCGCCATTTTTGTAAGGCTTGTCAAAGATACTGGACCGCTGGAGGCATCATGAGGAACGTGCCGGTTGGAGCCGGTCGCCGGAAGAGTAAAAACTCTGCTTCTTATTACCGTCACATCACAATCTCTGAGGCTCTTGAAGCTGCTGAAATTGAGGCTTCAAATGGAACCCACAAACCAAAATTCATTGGTAACTGTGGCAGAGTCCTCAGTTTCAATTTGGATGCACCCAGTTCTATCCCTAAAGGGTGTGATAAAAGCTCGAGTTTGTCCTCTATGGCAGTTCAAACACCATCAGAATTGAAAACCAACGGCTTCCCTTCTCAAATTTCTTGTCTTTCTGGAGTTCCGTGGCCTTTGGTTTGGAATTCAACAGTTTCTCCACCCTTCGGCCCTCCAGGATTTCCCTTTTCTTTTCTTCCAGCAACTACTTGGAGCTGTGGGGTTCCAGGACCATGGAACACCCCGTGGTTTTCACCACAAGATTCCACAGAACAAAAATCTAAAGCTTCTCCAACACTGGGAAAGCATCAAAGAGACAATGAAATGGCGAAAGAAGATGCCATTTCAAGTAAAGAAGAGGGGGTTAAGCAGAGAAATGGATGTGTATTAACCCCAAAGACTTTAAGGATTGATGACCCAAGTGAGGCTGCAAAAAGTTCCATATGGGCAACGCTTGGGATAAAGAATGAATCAATGAGTGGGGGAAGAAATCTGTTCAAACCCTTTCAACCCAAGGGCCACGAGAAGGTTCCTGTTTCTAAAAACGCCTCAGTGTTGCAGGCAAACCCTGCAGCCTTTTCGAGATCTCTCGTCTTTCATGAGAGCTCTTGAAGGCAGATTATATGATTATTCCCCGTTTAAGCGTTTACAGGTATTTGCCTAATTTACATAGCCATGCAGATTGCTGAGCTTCCTTCTTAAGCCTTGTAATGTACAGAGATATATGAAATACTGACATAGATCGTAGAAACTTGGGTTGTTTGTGGTGCCGTCTTATCTGTTTTTGTTGCATTTTTTATGAGTGAGTCGATGTATAAACCTGAGACAGCCACATGGGCACTGCAGAGAGTATCTTCCAAAAAGTTGAGAAATGGAGAAAAGAGTGGAAAGGCAATTATAAGCAACAAAAGGTGATCCTACTGTGTGGCTTTATGCAGCGCCAAAGCACCAAAACTCCTTATCACAACAGCTGTAACAGGATAAGATTGAGAAAGCAGATAGTCCATCTCTTTTCTTTTCTTTTCACTTCATTTCATTTCCTGCTGTTTTTAAGTCGCAACTAATAATAGGGCAAAGGCCAAAGGGAGATATTTAG

Coding sequence (CDS)

ATGTTGGATTGTAAGGATCCTGCTATTAAGCTTTTTGGCCGGAATATCCCTCTTTCCGACGACGTTGAAGCTCCGGCGGTTCATTCCCATGACTTCAGTTCTGAGAAACATGCAGAACCCAGGAAGGACGCAAGCGTAGATGATCTTGAGAAACCTGTTGATGGCTCAGATGATTCAAGAAATCTGGAGTGCGGGCAAGAGGGAAGCGTGAATCCCAAAACGCCGTCTATAGATGAAGAAACTGCGAGACCCATTAATGGAGAACCAGAGAGTGAAAGGCTTAATTCAGAGAGAACCCCAAAGAAACCTGATAAATTGCTTCCATGTCCTCGCTGCAAAAGCATGGACACAAAGTTTTGTTACTACAACAATTACAATGTCAATCAACCTCGCCATTTTTGTAAGGCTTGTCAAAGATACTGGACCGCTGGAGGCATCATGAGGAACGTGCCGGTTGGAGCCGGTCGCCGGAAGAGTAAAAACTCTGCTTCTTATTACCGTCACATCACAATCTCTGAGGCTCTTGAAGCTGCTGAAATTGAGGCTTCAAATGGAACCCACAAACCAAAATTCATTGGTAACTGTGGCAGAGTCCTCAGTTTCAATTTGGATGCACCCAGTTCTATCCCTAAAGGGTGTGATAAAAGCTCGAGTTTGTCCTCTATGGCAGTTCAAACACCATCAGAATTGAAAACCAACGGCTTCCCTTCTCAAATTTCTTGTCTTTCTGGAGTTCCGTGGCCTTTGGTTTGGAATTCAACAGTTTCTCCACCCTTCGGCCCTCCAGGATTTCCCTTTTCTTTTCTTCCAGCAACTACTTGGAGCTGTGGGGTTCCAGGACCATGGAACACCCCGTGGTTTTCACCACAAGATTCCACAGAACAAAAATCTAAAGCTTCTCCAACACTGGGAAAGCATCAAAGAGACAATGAAATGGCGAAAGAAGATGCCATTTCAAGTAAAGAAGAGGGGGTTAAGCAGAGAAATGGATGTGTATTAACCCCAAAGACTTTAAGGATTGATGACCCAAGTGAGGCTGCAAAAAGTTCCATATGGGCAACGCTTGGGATAAAGAATGAATCAATGAGTGGGGGAAGAAATCTGTTCAAACCCTTTCAACCCAAGGGCCACGAGAAGGTTCCTGTTTCTAAAAACGCCTCAGTGTTGCAGGCAAACCCTGCAGCCTTTTCGAGATCTCTCGTCTTTCATGAGAGCTCTTGA

Protein sequence

MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSRNLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS

Homology

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BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 4.8e-78
Identity = 195/475 (41.05%), Postives = 239/475 (50.32%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           M++ +DPAIKLFG  IP     E+      D   +      K       EK      D  
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSP-----EKVTPELSDKN 61

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESE--RLNSERTP-----KKPDKLLPCPRCK 120
           N  C      N K  ++D+E A   +    S+    N + TP     KKP K+LPCPRCK
Sbjct: 62  NNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCK 121

Query: 121 SMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISE 180
           SM+TKFCYYNNYN+NQPRHFCKACQRYWTAGG MRNVPVGAGRRK+K+S+S+YRHITISE
Sbjct: 122 SMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISE 181

Query: 181 ALEAAEIEASNGTHKPKFIGNCGRVLSFNLDA---------------------------- 240
           ALEAA ++       P    N  RVLSF L+A                            
Sbjct: 182 ALEAARLD-------PGLQANT-RVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNR 241

Query: 241 -------------------------PSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 300
                                     +S     D+S + S   V+       N   +  +
Sbjct: 242 FHGLADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGYA 301

Query: 301 CLSGVPWPLVWNSTVSPP--FGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSK 360
           C+ GVPWP  WN  + PP  + PPG+P  F P           W  P   P  S+   S+
Sbjct: 302 CIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYPY----------WTIPMLPPHQSSSPISQ 361

Query: 361 A-----SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWA 405
                 SPTLGKH RD   +K+D     E   KQ+ GCVL PKTLRIDDP+EAAKSSIW 
Sbjct: 362 KCSNTNSPTLGKHPRDEGSSKKD----NETERKQKAGCVLVPKTLRIDDPNEAAKSSIWT 421

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BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 7.4e-63
Identity = 185/472 (39.19%), Postives = 237/472 (50.21%), Query Frame = 0


Query: 6   DPAIKLFGRNIPLSD---------------DVEAPAVHSHDFSSEKHAEPRKDASV--DD 65
           DPAIKLFG+ IPL +               + + P   S   + +   E   D+ +  ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  LEKPVDGSDDS-------RNLECGQE------GSVNPKTPSIDEET----ARPINGEPES 125
            +   DG  +S       ++ EC +E        V   T  I E+T    A   N E   
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 122

Query: 126 ERLNSERTPKKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVP 185
              + E   KKPDK+LPCPRC SM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 186 VGAGRRKSKNSASYY-RHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAP--SS 245
           VGAGRRK+K+ AS+Y RH++I+ A EA +  A      P    N   +L+F  D+    S
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP----NGANLLTFGSDSVLCES 242

Query: 246 IPKG---CDKSSSLSSMAVQTPSE--------LKTNGFPSQISCLSGVP--------WPL 305
           +  G    +KS   +   +Q P+E         +TN     +S L  VP        WP 
Sbjct: 243 MASGLNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTVSPLPKVPCFPGPPPTWPY 302

Query: 306 VWNS---TVSPPFGPPGFPFSFLPATTWSC-GV-PGPWNT-PWFSPQDSTEQKSKASPTL 365
            WN    T+ P + PP +         WSC GV PG WN+  W    +S    +  SPTL
Sbjct: 303 AWNGVSWTILPFYPPPAY---------WSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTL 362

Query: 366 GKHQRDNEMAKEDAISSKEEGVKQRNG----CVLTPKTLRIDDPSEAAKSSIWATLGIKN 407
           GKH RD   A+      + E + +       C+  PKTLRIDDP EAAKSSIW TLGIK 
Sbjct: 363 GKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKK 422

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BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 230.7 bits (587), Expect = 2.9e-59
Identity = 156/406 (38.42%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           ML+ KDPAIKLFG  IP    +E          +++  E  ++ ++ D            
Sbjct: 1   MLETKDPAIKLFGMKIPFPTVLEV---------ADEEEEKNQNKTLTD------------ 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
                                        +SE+   ++T KKP K+LPCPRC SM+TKFC
Sbjct: 61  -----------------------------QSEK---DKTLKKPTKILPCPRCNSMETKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSA--SYYRHITISEALEAA 180
           YYNNYNVNQPRHFCKACQRYWT+GG MR+VP+GAGRRK+KN++  S+Y H+TISE     
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE----- 180

Query: 181 EIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQ 240
                            G VLSF+L     +      +  L +  ++   E   N   + 
Sbjct: 181 ---------------TNGPVLSFSLGDDQKVSSNRFGNQKLVA-RIENNDERSNNNTSNG 240

Query: 241 ISCLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSK 300
           ++C  GV WP  WN     P   P +P+                   W  P  S+   S 
Sbjct: 241 LNCFPGVSWPYTWN-----PAFYPVYPY-------------------WSMPVLSSPVSSS 296

Query: 301 ASPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIK 360
            + TLGKH RD +   +          KQRNG VL PKTLRIDDP+EAAKSSIW TLGIK
Sbjct: 301 PTSTLGKHSRDEDETVKQ---------KQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIK 296

Query: 361 NESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHE 405
           NE M  G    K  +    E+   ++ + VL ANPAA SRS+ FHE
Sbjct: 361 NEVMFNGFGSKKEVKLSNKEE---TETSLVLCANPAALSRSINFHE 296

[Close]

BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot
Match: Q9SEZ3 (Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 6.1e-41
Identity = 149/439 (33.94%), Postives = 206/439 (46.92%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEA--PAVHS--HDFSSEKHAEPRKDAS------VDDLE 60
           M   +D  IKLFGR I    DV    P+  S  HD SS+   E    +S      +  + 
Sbjct: 1   MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIR 60

Query: 61  KPVDGSDDSRNL----ECGQEGSVNPKTPS-IDEETARPINGEPESERLNSERTP----- 120
            PV  S+   N         + +  PK  S I    +   N + +SE   +  T      
Sbjct: 61  VPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGE 120

Query: 121 -----KKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAG 180
                KKPDKL+PCPRC+S +TKFCYYNNYNVNQPR+FC+ CQRYWTAGG MRNVPVG+G
Sbjct: 121 KSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSG 180

Query: 181 RRKSKN--SASYYRHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGC 240
           RRK+K   S+++Y  +T  +                    N G +LSF     S    G 
Sbjct: 181 RRKNKGWPSSNHYLQVTSEDCDN----------------NNSGTILSFGSSESSVTETGK 240

Query: 241 DKSSSLSSMAVQTPSELKTN--GF--PSQISCLSGVPWPLVWNSTVSPPFGPPGFPFSFL 300
            +S   + ++  + S+   +  GF  P  +   +  PWP  W+     P GP     SF 
Sbjct: 241 HQSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSSPWPYQWS-----PTGPNA---SFY 300

Query: 301 PAT-TWSCGVPGPWNTPWFSPQDSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQR 360
           P    W C VP                 S+ S  LGK  RD    + +  ++     + R
Sbjct: 301 PVPFYWGCTVP-------------IYPTSETSSCLGKRSRDQTEGRINDTNTTITTTRAR 360

Query: 361 NGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVP--VSKNA 406
               L  ++LR++   EA+KS++W+ L  K E  + G +LF  F  KG+      VS+ +
Sbjct: 361 ----LVSESLRMN--IEASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETS 396

[Close]

BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot
Match: Q9LQX4 (Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.7e-33
Identity = 129/412 (31.31%), Postives = 179/412 (43.45%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNI-PLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDS 60
           M   +D  +KLFG  I P+S D  + + H    SS   +          +       + S
Sbjct: 1   MSQVRDTPVKLFGWTITPVSHDPYSSSSHVLPDSSSSSSSSSLSLRPHMMNNQSVTDNTS 60

Query: 61  RNLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKF 120
             L           + + D++ +       E E+       KKPDK+LPCPRC S DTKF
Sbjct: 61  LKLSSNLNNESKETSENSDDQHSEITTITSEEEKTTE---LKKPDKILPCPRCNSADTKF 120

Query: 121 CYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKN--SASYYRHITISEALEA 180
           CYYNNYNVNQPRHFC+ CQRYWTAGG MR VPVG+GRRK+K   S+  Y HIT  +    
Sbjct: 121 CYYNNYNVNQPRHFCRKCQRYWTAGGSMRIVPVGSGRRKNKGWVSSDQYLHITSEDT--- 180

Query: 181 AEIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGF-- 240
                        +  +  ++LSF  ++  S+     K  S        P   + N F  
Sbjct: 181 -----------DNYNSSSTKILSF--ESSDSLVTERPKHQSNEVKINAEPVSQEPNNFQG 240

Query: 241 --PSQISCLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDST 300
             P Q S +S  PWP  +         PP   F  +P   W C +P  W+T         
Sbjct: 241 LLPPQASPVS-PPWPYQY---------PPNPSFYHMP-VYWGCAIP-VWST--------- 300

Query: 301 EQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWA 360
                 S  LGK  RD E + E    SK     +R   +L  ++++ ++ S A  + +W 
Sbjct: 301 ---LDTSTCLGKRTRD-ETSHETVKESK--NAFERTSLLLESQSIK-NETSMATNNHVWY 360

Query: 361 TLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHES 406
            + +  E            + K      V +    LQANPAA +RS+ F ES
Sbjct: 361 PVPMTREKTQEFSFFSNGAETKSSNNRFVPETYLNLQANPAAMARSMNFRES 365

[Close]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL
Match: A0A6J1KID0 (cyclic dof factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111495504 PE=4 SV=1)

HSP 1 Score: 830.1 bits (2143), Expect = 4.0e-237
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR
Sbjct: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC
Sbjct: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240
           EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS
Sbjct: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240

Query: 241 CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS 300
           CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS
Sbjct: 241 CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS 300

Query: 301 PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE 360
           PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE
Sbjct: 301 PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE 360

Query: 361 SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 407
           SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS
Sbjct: 361 SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 406

[Close]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL
Match: A0A6J1E7D5 (cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111431399 PE=4 SV=1)

HSP 1 Score: 804.3 bits (2076), Expect = 2.4e-229
Identity = 397/407 (97.54%), Postives = 400/407 (98.28%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDA VDDLEKPVDGSDDSR
Sbjct: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDACVDDLEKPVDGSDDSR 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLE GQEGSVNPKTPSIDEETARPINGEPESERLNSE+T KKPDKLLPCPRCKSMDTKFC
Sbjct: 61  NLEGGQEGSVNPKTPSIDEETARPINGEPESERLNSEKTLKKPDKLLPCPRCKSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240
           EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS
Sbjct: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240

Query: 241 CLSGVPWPLVWNSTVS-PPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKA 300
           CLSGVPWPLVWNS+VS PPF PPGFPFSFLPATTWSCGVPGPWNTPWFSPQDST QKSKA
Sbjct: 241 CLSGVPWPLVWNSSVSPPPFAPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTAQKSKA 300

Query: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN 360
           SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN
Sbjct: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN 360

Query: 361 ESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 407
           ESMSGGRNLFKPF+PKGHEKVPVSKNASVLQANPAA SRSLVFHESS
Sbjct: 361 ESMSGGRNLFKPFEPKGHEKVPVSKNASVLQANPAALSRSLVFHESS 407

[Close]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL
Match: A0A1S3B7K6 (cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103486647 PE=4 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.7e-179
Identity = 332/438 (75.80%), Postives = 357/438 (81.51%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLD KDP IKLFGR IPLSDD E PAV SHDFSS KH EPRKDA++D+ EKPVD SDD R
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAETPAVLSHDFSSHKHPEPRKDAAIDEPEKPVDDSDDLR 60

Query: 61  NLECGQE-GSVNPKTPSIDEE-TARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTK 120
           N+E  +E  SVNPKTPSIDEE T  P+NGEPESE+ NSE+T KKPDKLLPCPRCKSM+TK
Sbjct: 61  NIEREEEAASVNPKTPSIDEETTTTPVNGEPESEKSNSEKTLKKPDKLLPCPRCKSMETK 120

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180
           FCYYNNYNVNQPRHFCKACQRYWTAGG MRNVPVGAGRRKSKNSASYYRHITISEALEAA
Sbjct: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180

Query: 181 EIEASNGTHKPKFIGNCGRVLSFNLDAPSSIP---------------------------K 240
            IE+ NGT KPKFI N GRVLSFNLDAPSS P                           +
Sbjct: 181 RIESPNGTQKPKFINNNGRVLSFNLDAPSSDPVMGSILNLGENRVLSNGVKKFEEKAVDQ 240

Query: 241 GCDKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPP-FGPPGFPFSFLP 300
           GC+K+SSLSSM VQ+ SELK NGFPSQISCLSGVPWP VWNS+V PP F PPGFP SF P
Sbjct: 241 GCEKNSSLSSMPVQSSSELKINGFPSQISCLSGVPWPFVWNSSVPPPTFTPPGFPLSFFP 300

Query: 301 ATTWSCGVPGPWNTPWFSPQ--DSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQR 360
           A  W+ GVPGPWNTPWFSPQ   S    +KAS TLGKHQRD+EMAKEDAISSKEE  KQR
Sbjct: 301 AAAWNSGVPGPWNTPWFSPQPEKSLCSDTKASSTLGKHQRDHEMAKEDAISSKEEVFKQR 360

Query: 361 NGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASV 407
           NG VLTPKTLRIDDPSEAAKSSIWATLGIKNES++GG+NLFK FQPKGH+KV V++ +SV
Sbjct: 361 NGHVLTPKTLRIDDPSEAAKSSIWATLGIKNESLTGGKNLFKTFQPKGHQKVHVAETSSV 420

[Close]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL
Match: A0A5D3BII3 (Cyclic dof factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00930 PE=4 SV=1)

HSP 1 Score: 634.8 bits (1636), Expect = 2.5e-178
Identity = 331/438 (75.57%), Postives = 356/438 (81.28%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLD KDP IKLFGR IPLSDD E PAV SHDFSS KH EPRKDA++D+ EKPVD SDD R
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAETPAVLSHDFSSHKHPEPRKDAAIDEPEKPVDDSDDLR 60

Query: 61  NLECGQE-GSVNPKTPSIDEE-TARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTK 120
           N+E  +E  SVNPKTPSIDEE T  P+NGEPESE+ NSE+T KKPDKLLPCPRCKSM+TK
Sbjct: 61  NIEREEEAASVNPKTPSIDEETTTTPVNGEPESEKSNSEKTLKKPDKLLPCPRCKSMETK 120

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180
           FCYYNNYNVNQPRHFCKACQRYWTAGG MRNVPVGAGRRKSKNSASYYRHITISEALEAA
Sbjct: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180

Query: 181 EIEASNGTHKPKFIGNCGRVLSFNLDAPSSIP---------------------------K 240
            IE+ NGT KPKFI N GRVLSFNLDAPSS P                           +
Sbjct: 181 RIESPNGTQKPKFINNNGRVLSFNLDAPSSDPVMGSVLNLGENRVLSNGVKKFEEKAVDQ 240

Query: 241 GCDKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPP-FGPPGFPFSFLP 300
           GC+K+SSLSSM VQ+ SELK NGFPSQISCLSGVPWP VWNS+V PP F PPGFP SF P
Sbjct: 241 GCEKNSSLSSMPVQSSSELKINGFPSQISCLSGVPWPFVWNSSVPPPTFTPPGFPLSFFP 300

Query: 301 ATTWSCGVPGPWNTPWFSPQ--DSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQR 360
           A  W+ GVPGPWNTPWFSPQ   S    +KAS TLGKHQRD+EMAKEDAISSKEE  KQR
Sbjct: 301 AAAWNSGVPGPWNTPWFSPQPEKSLCSDTKASSTLGKHQRDHEMAKEDAISSKEEVSKQR 360

Query: 361 NGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASV 407
           N  VLTPKTLRIDDPSEAAKSSIWATLGIKNES++GG+NLFK FQPKGH+KV V++ +SV
Sbjct: 361 NVHVLTPKTLRIDDPSEAAKSSIWATLGIKNESLTGGKNLFKTFQPKGHQKVHVAETSSV 420

[Close]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL
Match: A0A0A0LVJ4 (DOF domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G033250 PE=4 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 2.3e-176
Identity = 326/437 (74.60%), Postives = 355/437 (81.24%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLD KDP IKLFGR IPLSDD E PA+ S       HAE RKDA++D+ EKPVD SDDS 
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAEPPALLS-------HAEHRKDAAIDEPEKPVDDSDDSG 60

Query: 61  NLECGQEGSVNPKTPSIDEE-TARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKF 120
           N+E G+E SVNPKTPSIDEE T  P++GEPESE+ NSE+T KKPDKLLPCPRCKSM+TKF
Sbjct: 61  NIERGEEASVNPKTPSIDEETTTTPVDGEPESEKSNSEKTLKKPDKLLPCPRCKSMETKF 120

Query: 121 CYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAE 180
           CYYNNYNVNQPRHFCKACQRYWTAGG MRNVPVGAGRRKSKNSASYYRHITISEALEAA 
Sbjct: 121 CYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAAR 180

Query: 181 IEASNGTHKPKFIGNCGRVLSFNLDAPSSIP---------------------------KG 240
           IE+ NGTHKPKFI N GRVLSFNLDAP+S P                           +G
Sbjct: 181 IESPNGTHKPKFISNNGRVLSFNLDAPTSDPVMGSVLNLGENRVLSNGVKKFEEKGVDQG 240

Query: 241 CDKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPP-FGPPGFPFSFLPA 300
           C+KSSSLSSM VQ+ SELK NGFPSQISCLSGVPWP VWNS+V PP F PPGFP SF PA
Sbjct: 241 CEKSSSLSSMPVQSSSELKINGFPSQISCLSGVPWPFVWNSSVPPPAFTPPGFPMSFFPA 300

Query: 301 TTWSCGVPGPWNTPWFSPQ--DSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQRN 360
             W+ GVPGPWNTPWFSPQ   S    +KAS TLGKHQRD+EM+KEDAISSKEEG+K+RN
Sbjct: 301 AAWNSGVPGPWNTPWFSPQPEKSLCSDTKASSTLGKHQRDHEMSKEDAISSKEEGIKKRN 360

Query: 361 GCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASVL 407
           G VLTPKTLRIDDPSEAAKSSIWATLGIKNES++GG+NLFK FQPKGHEKV V++ +SVL
Sbjct: 361 GHVLTPKTLRIDDPSEAAKSSIWATLGIKNESITGGKNLFKTFQPKGHEKVHVAETSSVL 420

[Close]

BLAST of CmaCh13G011380 vs. NCBI nr
Match: XP_023001346.1 (cyclic dof factor 3-like [Cucurbita maxima])

HSP 1 Score: 830.1 bits (2143), Expect = 8.3e-237
Identity = 406/406 (100.00%), Postives = 406/406 (100.00%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR
Sbjct: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC
Sbjct: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240
           EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS
Sbjct: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240

Query: 241 CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS 300
           CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS
Sbjct: 241 CLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKAS 300

Query: 301 PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE 360
           PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE
Sbjct: 301 PTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKNE 360

Query: 361 SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 407
           SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS
Sbjct: 361 SMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 406

[Close]

BLAST of CmaCh13G011380 vs. NCBI nr
Match: XP_022923789.1 (cyclic dof factor 3-like [Cucurbita moschata] >KAG6584465.1 Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020053.1 Cyclic dof factor 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 804.3 bits (2076), Expect = 4.9e-229
Identity = 397/407 (97.54%), Postives = 400/407 (98.28%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDA VDDLEKPVDGSDDSR
Sbjct: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDACVDDLEKPVDGSDDSR 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLE GQEGSVNPKTPSIDEETARPINGEPESERLNSE+T KKPDKLLPCPRCKSMDTKFC
Sbjct: 61  NLEGGQEGSVNPKTPSIDEETARPINGEPESERLNSEKTLKKPDKLLPCPRCKSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240
           EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS
Sbjct: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240

Query: 241 CLSGVPWPLVWNSTVS-PPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKA 300
           CLSGVPWPLVWNS+VS PPF PPGFPFSFLPATTWSCGVPGPWNTPWFSPQDST QKSKA
Sbjct: 241 CLSGVPWPLVWNSSVSPPPFAPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTAQKSKA 300

Query: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN 360
           SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN
Sbjct: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN 360

Query: 361 ESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 407
           ESMSGGRNLFKPF+PKGHEKVPVSKNASVLQANPAA SRSLVFHESS
Sbjct: 361 ESMSGGRNLFKPFEPKGHEKVPVSKNASVLQANPAALSRSLVFHESS 407

[Close]

BLAST of CmaCh13G011380 vs. NCBI nr
Match: XP_023519461.1 (cyclic dof factor 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 788.1 bits (2034), Expect = 3.6e-224
Identity = 393/407 (96.56%), Postives = 396/407 (97.30%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR
Sbjct: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLE GQEGSVNPKTPSIDEETARPINGEPESERL SE+T KKPDKLLPCPRCKSMDTKFC
Sbjct: 61  NLEGGQEGSVNPKTPSIDEETARPINGEPESERLYSEKTLKKPDKLLPCPRCKSMDTKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 240
           EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKS SLSSMAVQTPSELKTNGFPSQIS
Sbjct: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSWSLSSMAVQTPSELKTNGFPSQIS 240

Query: 241 CLSGVPWPLVWNSTVS-PPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSKA 300
           CLSGVP PLVWNS+VS PPFGPPGFPFSFLP TTWSCGVPGPWNTPWFSPQDST QKSKA
Sbjct: 241 CLSGVPCPLVWNSSVSPPPFGPPGFPFSFLPPTTWSCGVPGPWNTPWFSPQDSTAQKSKA 300

Query: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIKN 360
           SPTLGKHQRDNEMAKEDAISSKEEGVKQRNG VLTPKTLRIDDPSEAAKSSIWATLGIKN
Sbjct: 301 SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGGVLTPKTLRIDDPSEAAKSSIWATLGIKN 360

Query: 361 ESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHESS 407
           ESMSGGRNLFK F+PKGHEKVPVSKNASVLQANPAA SRSLVFHESS
Sbjct: 361 ESMSGGRNLFKTFEPKGHEKVPVSKNASVLQANPAALSRSLVFHESS 407

[Close]

BLAST of CmaCh13G011380 vs. NCBI nr
Match: XP_038895608.1 (cyclic dof factor 3-like [Benincasa hispida])

HSP 1 Score: 644.4 bits (1661), Expect = 6.4e-181
Identity = 331/436 (75.92%), Postives = 356/436 (81.65%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           M D KDP IKLFGR IPLSD+ EAP +       +KHA+PRKD +VDD EKPVD S+DS 
Sbjct: 1   MFDSKDPTIKLFGRQIPLSDEGEAPVI------LDKHAQPRKDDAVDDPEKPVDDSNDST 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
           NLE G+E SVNPKTPSIDEETA PINGE ESE+ NSE+T KKPDKLLPCPRCKSM+TKFC
Sbjct: 61  NLEGGEEASVNPKTPSIDEETATPINGETESEKPNSEKTLKKPDKLLPCPRCKSMETKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAAEI 180
           YYNNYNVNQPRHFCKACQRYWTAGG MRNVPVGAGRRKSKNSASYYRHITIS+ALEAA I
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISDALEAARI 180

Query: 181 EASNGTHKPKFIGNCGRVLSFNLDAPSSIP---------------------------KGC 240
           E  NGTH+PKFIGN GR+LSFN D PSS P                           +GC
Sbjct: 181 ETPNGTHEPKFIGNNGRILSFNSDGPSSDPVVGSVLNLAENRVLSNGVKKFEERGSDQGC 240

Query: 241 DKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPP-FGPPGFPFSFLPAT 300
           DKSSSLSSMAVQ+ SELK NGFPSQISC+SGVPWP VWNS+V PP FGPPGFP SF PA 
Sbjct: 241 DKSSSLSSMAVQSSSELKINGFPSQISCISGVPWPFVWNSSVPPPAFGPPGFPLSFFPAA 300

Query: 301 TWSCGVPGPWNTPWFSPQ--DSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQRNG 360
            W+CGVPGPWNTPWFSPQ   S    SKAS TLGKHQRDNEMAKE+AISSKEEGVKQRNG
Sbjct: 301 AWNCGVPGPWNTPWFSPQPEKSVGPDSKASSTLGKHQRDNEMAKEEAISSKEEGVKQRNG 360

Query: 361 CVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASVLQ 407
            VLTPKTLRIDDPSEAAKSSIWATLGIKNES++GG+NLFK FQPKGHEKV V++ +SVLQ
Sbjct: 361 HVLTPKTLRIDDPSEAAKSSIWATLGIKNESITGGKNLFKTFQPKGHEKVQVTETSSVLQ 420

[Close]

BLAST of CmaCh13G011380 vs. NCBI nr
Match: XP_008442918.1 (PREDICTED: cyclic dof factor 3 [Cucumis melo])

HSP 1 Score: 638.6 bits (1646), Expect = 3.5e-179
Identity = 332/438 (75.80%), Postives = 357/438 (81.51%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           MLD KDP IKLFGR IPLSDD E PAV SHDFSS KH EPRKDA++D+ EKPVD SDD R
Sbjct: 1   MLDSKDPTIKLFGRQIPLSDDAETPAVLSHDFSSHKHPEPRKDAAIDEPEKPVDDSDDLR 60

Query: 61  NLECGQE-GSVNPKTPSIDEE-TARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTK 120
           N+E  +E  SVNPKTPSIDEE T  P+NGEPESE+ NSE+T KKPDKLLPCPRCKSM+TK
Sbjct: 61  NIEREEEAASVNPKTPSIDEETTTTPVNGEPESEKSNSEKTLKKPDKLLPCPRCKSMETK 120

Query: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180
           FCYYNNYNVNQPRHFCKACQRYWTAGG MRNVPVGAGRRKSKNSASYYRHITISEALEAA
Sbjct: 121 FCYYNNYNVNQPRHFCKACQRYWTAGGTMRNVPVGAGRRKSKNSASYYRHITISEALEAA 180

Query: 181 EIEASNGTHKPKFIGNCGRVLSFNLDAPSSIP---------------------------K 240
            IE+ NGT KPKFI N GRVLSFNLDAPSS P                           +
Sbjct: 181 RIESPNGTQKPKFINNNGRVLSFNLDAPSSDPVMGSILNLGENRVLSNGVKKFEEKAVDQ 240

Query: 241 GCDKSSSLSSMAVQTPSELKTNGFPSQISCLSGVPWPLVWNSTVSPP-FGPPGFPFSFLP 300
           GC+K+SSLSSM VQ+ SELK NGFPSQISCLSGVPWP VWNS+V PP F PPGFP SF P
Sbjct: 241 GCEKNSSLSSMPVQSSSELKINGFPSQISCLSGVPWPFVWNSSVPPPTFTPPGFPLSFFP 300

Query: 301 ATTWSCGVPGPWNTPWFSPQ--DSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQR 360
           A  W+ GVPGPWNTPWFSPQ   S    +KAS TLGKHQRD+EMAKEDAISSKEE  KQR
Sbjct: 301 AAAWNSGVPGPWNTPWFSPQPEKSLCSDTKASSTLGKHQRDHEMAKEDAISSKEEVFKQR 360

Query: 361 NGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVPVSKNASV 407
           NG VLTPKTLRIDDPSEAAKSSIWATLGIKNES++GG+NLFK FQPKGH+KV V++ +SV
Sbjct: 361 NGHVLTPKTLRIDDPSEAAKSSIWATLGIKNESLTGGKNLFKTFQPKGHQKVHVAETSSV 420

[Close]

BLAST of CmaCh13G011380 vs. TAIR 10
Match: AT3G47500.1 (cycling DOF factor 3 )

HSP 1 Score: 293.1 bits (749), Expect = 3.4e-79
Identity = 195/475 (41.05%), Postives = 239/475 (50.32%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           M++ +DPAIKLFG  IP     E+      D   +      K       EK      D  
Sbjct: 2   MMETRDPAIKLFGMKIPFPSVFESAVTVEDDEEDDWSGGDDKSP-----EKVTPELSDKN 61

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESE--RLNSERTP-----KKPDKLLPCPRCK 120
           N  C      N K  ++D+E A   +    S+    N + TP     KKP K+LPCPRCK
Sbjct: 62  NNNCNDNSFNNSKPETLDKEEATSTDQIESSDTPEDNQQTTPDGKTLKKPTKILPCPRCK 121

Query: 121 SMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSASYYRHITISE 180
           SM+TKFCYYNNYN+NQPRHFCKACQRYWTAGG MRNVPVGAGRRK+K+S+S+YRHITISE
Sbjct: 122 SMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAGRRKNKSSSSHYRHITISE 181

Query: 181 ALEAAEIEASNGTHKPKFIGNCGRVLSFNLDA---------------------------- 240
           ALEAA ++       P    N  RVLSF L+A                            
Sbjct: 182 ALEAARLD-------PGLQANT-RVLSFGLEAQQQHVAAPMTPVMKLQEDQKVSNGARNR 241

Query: 241 -------------------------PSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQIS 300
                                     +S     D+S + S   V+       N   +  +
Sbjct: 242 FHGLADQRLVARVENGDDCSSGSSVTTSNNHSVDESRAQSGSVVEAQMNNNNNNNMNGYA 301

Query: 301 CLSGVPWPLVWNSTVSPP--FGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSK 360
           C+ GVPWP  WN  + PP  + PPG+P  F P           W  P   P  S+   S+
Sbjct: 302 CIPGVPWPYTWNPAMPPPGFYPPPGYPMPFYPY----------WTIPMLPPHQSSSPISQ 361

Query: 361 A-----SPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWA 405
                 SPTLGKH RD   +K+D     E   KQ+ GCVL PKTLRIDDP+EAAKSSIW 
Sbjct: 362 KCSNTNSPTLGKHPRDEGSSKKD----NETERKQKAGCVLVPKTLRIDDPNEAAKSSIWT 421

[Close]

BLAST of CmaCh13G011380 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-64
Identity = 185/472 (39.19%), Postives = 237/472 (50.21%), Query Frame = 0


Query: 6   DPAIKLFGRNIPLSD---------------DVEAPAVHSHDFSSEKHAEPRKDASV--DD 65
           DPAIKLFG+ IPL +               + + P   S   + +   E   D+ +  ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  LEKPVDGSDDS-------RNLECGQE------GSVNPKTPSIDEET----ARPINGEPES 125
            +   DG  +S       ++ EC +E        V   T  I E+T    A   N E   
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 122

Query: 126 ERLNSERTPKKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVP 185
              + E   KKPDK+LPCPRC SM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 186 VGAGRRKSKNSASYY-RHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAP--SS 245
           VGAGRRK+K+ AS+Y RH++I+ A EA +  A      P    N   +L+F  D+    S
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP----NGANLLTFGSDSVLCES 242

Query: 246 IPKG---CDKSSSLSSMAVQTPSE--------LKTNGFPSQISCLSGVP--------WPL 305
           +  G    +KS   +   +Q P+E         +TN     +S L  VP        WP 
Sbjct: 243 MASGLNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTVSPLPKVPCFPGPPPTWPY 302

Query: 306 VWNS---TVSPPFGPPGFPFSFLPATTWSC-GV-PGPWNT-PWFSPQDSTEQKSKASPTL 365
            WN    T+ P + PP +         WSC GV PG WN+  W    +S    +  SPTL
Sbjct: 303 AWNGVSWTILPFYPPPAY---------WSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTL 362

Query: 366 GKHQRDNEMAKEDAISSKEEGVKQRNG----CVLTPKTLRIDDPSEAAKSSIWATLGIKN 407
           GKH RD   A+      + E + +       C+  PKTLRIDDP EAAKSSIW TLGIK 
Sbjct: 363 GKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKK 422

[Close]

BLAST of CmaCh13G011380 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 242.7 bits (618), Expect = 5.3e-64
Identity = 185/472 (39.19%), Postives = 237/472 (50.21%), Query Frame = 0


Query: 6   DPAIKLFGRNIPLSD---------------DVEAPAVHSHDFSSEKHAEPRKDASV--DD 65
           DPAIKLFG+ IPL +               + + P   S   + +   E   D+ +  ++
Sbjct: 3   DPAIKLFGKTIPLPELGVVDSSSSYTGFLTETQIPVRLSDSCTGDDDDEEMGDSGLGREE 62

Query: 66  LEKPVDGSDDS-------RNLECGQE------GSVNPKTPSIDEET----ARPINGEPES 125
            +   DG  +S       ++ EC +E        V   T  I E+T    A   N E   
Sbjct: 63  GDDVGDGGGESETDKKEEKDSECQEESLRNESNDVTTTTSGITEKTETTKAAKTNEESGG 122

Query: 126 ERLNSERTPKKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVP 185
              + E   KKPDK+LPCPRC SM+TKFCYYNNYNVNQPRHFCK CQRYWTAGG MRNVP
Sbjct: 123 TACSQEGKLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKKCQRYWTAGGTMRNVP 182

Query: 186 VGAGRRKSKNSASYY-RHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAP--SS 245
           VGAGRRK+K+ AS+Y RH++I+ A EA +  A      P    N   +L+F  D+    S
Sbjct: 183 VGAGRRKNKSPASHYNRHVSITSA-EAMQKVARTDLQHP----NGANLLTFGSDSVLCES 242

Query: 246 IPKG---CDKSSSLSSMAVQTPSE--------LKTNGFPSQISCLSGVP--------WPL 305
           +  G    +KS   +   +Q P+E         +TN     +S L  VP        WP 
Sbjct: 243 MASGLNLVEKSLLKTQTVLQEPNEGLKITVPLNQTNEEAGTVSPLPKVPCFPGPPPTWPY 302

Query: 306 VWNS---TVSPPFGPPGFPFSFLPATTWSC-GV-PGPWNT-PWFSPQDSTEQKSKASPTL 365
            WN    T+ P + PP +         WSC GV PG WN+  W    +S    +  SPTL
Sbjct: 303 AWNGVSWTILPFYPPPAY---------WSCPGVSPGAWNSFTWMPQPNSPSGSNPNSPTL 362

Query: 366 GKHQRDNEMAKEDAISSKEEGVKQRNG----CVLTPKTLRIDDPSEAAKSSIWATLGIKN 407
           GKH RD   A+      + E + +       C+  PKTLRIDDP EAAKSSIW TLGIK 
Sbjct: 363 GKHSRDENAAEPGTAFDETESLGREKSKPERCLWVPKTLRIDDPEEAAKSSIWETLGIKK 422

[Close]

BLAST of CmaCh13G011380 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-60
Identity = 156/406 (38.42%), Postives = 201/406 (49.51%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEAPAVHSHDFSSEKHAEPRKDASVDDLEKPVDGSDDSR 60
           ML+ KDPAIKLFG  IP    +E          +++  E  ++ ++ D            
Sbjct: 1   MLETKDPAIKLFGMKIPFPTVLEV---------ADEEEEKNQNKTLTD------------ 60

Query: 61  NLECGQEGSVNPKTPSIDEETARPINGEPESERLNSERTPKKPDKLLPCPRCKSMDTKFC 120
                                        +SE+   ++T KKP K+LPCPRC SM+TKFC
Sbjct: 61  -----------------------------QSEK---DKTLKKPTKILPCPRCNSMETKFC 120

Query: 121 YYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAGRRKSKNSA--SYYRHITISEALEAA 180
           YYNNYNVNQPRHFCKACQRYWT+GG MR+VP+GAGRRK+KN++  S+Y H+TISE     
Sbjct: 121 YYNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNKNNSPTSHYHHVTISE----- 180

Query: 181 EIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGCDKSSSLSSMAVQTPSELKTNGFPSQ 240
                            G VLSF+L     +      +  L +  ++   E   N   + 
Sbjct: 181 ---------------TNGPVLSFSLGDDQKVSSNRFGNQKLVA-RIENNDERSNNNTSNG 240

Query: 241 ISCLSGVPWPLVWNSTVSPPFGPPGFPFSFLPATTWSCGVPGPWNTPWFSPQDSTEQKSK 300
           ++C  GV WP  WN     P   P +P+                   W  P  S+   S 
Sbjct: 241 LNCFPGVSWPYTWN-----PAFYPVYPY-------------------WSMPVLSSPVSSS 296

Query: 301 ASPTLGKHQRDNEMAKEDAISSKEEGVKQRNGCVLTPKTLRIDDPSEAAKSSIWATLGIK 360
            + TLGKH RD +   +          KQRNG VL PKTLRIDDP+EAAKSSIW TLGIK
Sbjct: 301 PTSTLGKHSRDEDETVKQ---------KQRNGSVLVPKTLRIDDPNEAAKSSIWTTLGIK 296

Query: 361 NESMSGGRNLFKPFQPKGHEKVPVSKNASVLQANPAAFSRSLVFHE 405
           NE M  G    K  +    E+   ++ + VL ANPAA SRS+ FHE
Sbjct: 361 NEVMFNGFGSKKEVKLSNKEE---TETSLVLCANPAALSRSINFHE 296

[Close]

BLAST of CmaCh13G011380 vs. TAIR 10
Match: AT1G69570.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 169.9 bits (429), Expect = 4.3e-42
Identity = 149/439 (33.94%), Postives = 206/439 (46.92%), Query Frame = 0


Query: 1   MLDCKDPAIKLFGRNIPLSDDVEA--PAVHS--HDFSSEKHAEPRKDAS------VDDLE 60
           M   +D  IKLFGR I    DV    P+  S  HD SS+   E    +S      +  + 
Sbjct: 1   MSKSRDTEIKLFGRTITSLLDVNCYDPSSLSPVHDVSSDPSKEDSSSSSSSCSPTIGPIR 60

Query: 61  KPVDGSDDSRNL----ECGQEGSVNPKTPS-IDEETARPINGEPESERLNSERTP----- 120
            PV  S+   N         + +  PK  S I    +   N + +SE   +  T      
Sbjct: 61  VPVKKSEQESNKFKDPYILSDLNEPPKAVSEISSPRSSKNNCDQQSEITTTTTTSTTSGE 120

Query: 121 -----KKPDKLLPCPRCKSMDTKFCYYNNYNVNQPRHFCKACQRYWTAGGIMRNVPVGAG 180
                KKPDKL+PCPRC+S +TKFCYYNNYNVNQPR+FC+ CQRYWTAGG MRNVPVG+G
Sbjct: 121 KSTALKKPDKLIPCPRCESANTKFCYYNNYNVNQPRYFCRNCQRYWTAGGSMRNVPVGSG 180

Query: 181 RRKSKN--SASYYRHITISEALEAAEIEASNGTHKPKFIGNCGRVLSFNLDAPSSIPKGC 240
           RRK+K   S+++Y  +T  +                    N G +LSF     S    G 
Sbjct: 181 RRKNKGWPSSNHYLQVTSEDCDN----------------NNSGTILSFGSSESSVTETGK 240

Query: 241 DKSSSLSSMAVQTPSELKTN--GF--PSQISCLSGVPWPLVWNSTVSPPFGPPGFPFSFL 300
            +S   + ++  + S+   +  GF  P  +   +  PWP  W+     P GP     SF 
Sbjct: 241 HQSGDTAKISADSVSQENKSYQGFLPPQVMLPNNSSPWPYQWS-----PTGPNA---SFY 300

Query: 301 PAT-TWSCGVPGPWNTPWFSPQDSTEQKSKASPTLGKHQRDNEMAKEDAISSKEEGVKQR 360
           P    W C VP                 S+ S  LGK  RD    + +  ++     + R
Sbjct: 301 PVPFYWGCTVP-------------IYPTSETSSCLGKRSRDQTEGRINDTNTTITTTRAR 360

Query: 361 NGCVLTPKTLRIDDPSEAAKSSIWATLGIKNESMSGGRNLFKPFQPKGHEKVP--VSKNA 406
               L  ++LR++   EA+KS++W+ L  K E  + G +LF  F  KG+      VS+ +
Sbjct: 361 ----LVSESLRMN--IEASKSAVWSKLPTKPEKKTQGFSLFNGFDTKGNSNRSSLVSETS 396

The following BLAST results are available for this feature:

BLAST of CmaCh13G011380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFV3	4.8e-78	41.05	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]
Q93ZL5	7.4e-63	39.19	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	2.9e-59	38.42	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q9SEZ3	6.1e-41	33.94	Cyclic dof factor 5 OS=Arabidopsis thaliana OX=3702 GN=CDF5 PE=2 SV=1	[more]
Q9LQX4	2.7e-33	31.31	Dof zinc finger protein DOF1.3 OS=Arabidopsis thaliana OX=3702 GN=DOF1.3 PE=3 SV...	[more]

BLAST of CmaCh13G011380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KID0	4.0e-237	100.00	cyclic dof factor 3-like OS=Cucurbita maxima OX=3661 GN=LOC111495504 PE=4 SV=1	[more]
A0A6J1E7D5	2.4e-229	97.54	cyclic dof factor 3-like OS=Cucurbita moschata OX=3662 GN=LOC111431399 PE=4 SV=1	[more]
A0A1S3B7K6	1.7e-179	75.80	cyclic dof factor 3 OS=Cucumis melo OX=3656 GN=LOC103486647 PE=4 SV=1	[more]
A0A5D3BII3	2.5e-178	75.57	Cyclic dof factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G...	[more]
A0A0A0LVJ4	2.3e-176	74.60	DOF domain class transcription factor OS=Cucumis sativus OX=3659 GN=Csa_1G033250...	[more]

BLAST of CmaCh13G011380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001346.1	8.3e-237	100.00	cyclic dof factor 3-like [Cucurbita maxima]	[more]
XP_022923789.1	4.9e-229	97.54	cyclic dof factor 3-like [Cucurbita moschata] >KAG6584465.1 Cyclic dof factor 3,...	[more]
XP_023519461.1	3.6e-224	96.56	cyclic dof factor 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_038895608.1	6.4e-181	75.92	cyclic dof factor 3-like [Benincasa hispida]	[more]
XP_008442918.1	3.5e-179	75.80	PREDICTED: cyclic dof factor 3 [Cucumis melo]	[more]

BLAST of CmaCh13G011380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47500.1	3.4e-79	41.05	cycling DOF factor 3	[more]
AT5G39660.1	5.3e-64	39.19	cycling DOF factor 2	[more]
AT5G39660.2	5.3e-64	39.19	cycling DOF factor 2	[more]
AT5G62430.1	2.1e-60	38.42	cycling DOF factor 1	[more]
AT1G69570.1	4.3e-42	33.94	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 105..161 e-value: 5.0E-32 score: 109.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 109..145
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 107..161 score: 28.453259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..323
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 287..326
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..76
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 1..405
None	No IPR available	PANTHER	PTHR31089:SF31	CYCLIC DOF FACTOR 1	coord: 1..405

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G011380.1	CmaCh13G011380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity