CmaCh13G011130 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAGATCGAGATTTAGTTGGATGAACAGAAATTTGTAGGGTTCGGTTCCTTTCATCATGAATTCTGTAAGCACAAAATCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCGCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGGTAGTCTTTTCTCCTGCATTTACCTTCAACCTTGTTGCTTAAACTCTGCACAAACACGAAACTTCACTTTTTAACTCTACTTTTTCTTTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCTTCTAAAGTTAACAGGTGTTTTTGATGTTCCATGCCCCATTCTTTATGGTTCTTTTTTTCTTTTGATGAACGTGTAATGTCTTTCCTGTGAGTGAATTTGAAATGATTAAAATTACTTTTCATGTAAGTGAGTGAATTTGAAATGATTAAAATTACTTTTCATGTGAGTGATTTTAAAATGATTAAAATTACTTTTCAGCTCCATTAAACTACTCTAAATTTCTGGGATTTGGAGGGAAATGGTTGATGCAAATCTGATGTTTATGGTGGTGTCTGTAACTTTGAATGTTATGAACTTTCGCGTCTAACTCTAATCTCCTTGAGTCATTTAGAAAATTTCTGTAGAACGAATCCTATGGATATCATGGAACAAGCTGAGCCTGTTCCAGTTCCATGGTGGGCTCTTCTTCTTAATGTTATTTATTAAGTTATTATGGTTGCTTAGAAATTAATGCTCTTTTTCCCTTTTTTGTATCTCCTCAAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAACACAAGATGCTCACGGGAATTTTGACGTTGGTTCTTCCCATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACCCTTTTGAATCCTAACTTATTTGATCAGGTAATTTCTCCATTTTCGTTATTGGTTTTTGAGATTGTTCTCGCTCTGACAGTTATCTGATTTTCTGATACCTGAGGATGCACGGCTGTTCAAGCTTGTTTGTCTAGACATCAAGTGTCTTCTTTATCGCTTATGTGTTTTTGCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGGATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTTATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGTATGGCCACTAGTCCCACTCTCATTACCTTATATACATCTTTCTAGCAGAATTGAAATTTGTTATTTATCCCGTTGTCTGAATTATTAATAAAACAAGTAGTCGTTTATGTTGGCTTGATTAAAACTTATAAAATAGTTGCTATGAATTCAAGCAACCAAATGTGTTTGAGGTCTTCGTTCTTGGTCACGAGCTTTATTTTTACTGAATTTTGCTTTTCAATAGGCTGAGTTCTTCTATACCAAATGAACAATCATCAATTCATGCTGGTTGGTGCCCTTTAAGTTATTTAAGAGAGTGGAGCTGGAAATTGGAAAATAATTAAGGTTAAGAAATAGGCCAAAATGAAGAACCTTTACATTCTCTGATTTTGTTCCTCTCCTCTCCCAATAGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGGTAAGACAATTGTTCTGCTTATATGATCTTACCTGCGCTTAAACTTACATTATGGTGGTGTCTACATTGCTCATTGTTCCTTCACCTTTACTTCTGGAATGTCTTGTTTCCTTTCTTCTTTTTGTTATCTCTGGCTGTGTTCTTTATTGATTTTGTCGTATGAAGGCTTCAAGTCTCACTCATAAAACATGTAATGGCCTTAAGTTCTTGTTTTTAATGACAGGGAGGTTTAAACAAACAGCCTATCAACCCATCTTCTAAGACTAAAGATAAATCTTTTCAATTTCTCCTCAATTTAAAAGACAACTTTTGCAGTTTATTTCCATTCACTTTGAATTCCTGCAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGTTGAATGCTTCGTCTTATCTATAGAAATCAAACATTTATCCAATGAGCTAATAATGGTGATGATTGTTGAAATCTCAATCTCTATGCTTCCAGGAATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGAATGATGCACACAAGTAGTTGCAGTCATGAAGTAACTTAATGGGACTGATTTCATCTTTTTATTCAAGGCAATGTTATAGCCATGTGACATAGCAGCAGCCAGCATCTGTGAAGATTGCTCATTATAACCCTTCCCTCATCTCAAAGATTTCATCCGGGCGGGATATGAAATAATGTTAATTTCTGAACTTATAAGTGGAATGAATAAGTTGTTCTCAAAGATTTCGGCAGCGTTTGAGATGGCTCGACCGTGAGGCAATCTTGTGAAACTGGAGTATGGTTTCCTGTGAACTGCTTGTAGATAATATGGATGGCTTTATAAAATTGAAAAAAAGGGAAAGGAATCTGTATATATTGCTGTTCTTCTTATTGAAGTAAACACTGAGAGGTCAGAGATCAGATAAATCACCAAAATATATTCCATAGAGTCTTGTTCATAGTTGATTGATTTGACCCTACAGAACTCACCCACCACACCCAGCATCCAAAATACATAATCT TAAGATCGAGATTTAGTTGGATGAACAGAAATTTGTAGGGTTCGGTTCCTTTCATCATGAATTCTGTAAGCACAAAATCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCGCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCTTCTAAAGTTAACAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAACACAAGATGCTCACGGGAATTTTGACGTTGGTTCTTCCCATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACCCTTTTGAATCCTAACTTATTTGATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGGATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTTATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGAATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGAATGATGCACACAAGTAGTTGCAGTCATGAAGTAACTTAATGGGACTGATTTCATCTTTTTATTCAAGGCAATGTTATAGCCATGTGACATAGCAGCAGCCAGCATCTGTGAAGATTGCTCATTATAACCCTTCCCTCATCTCAAAGATTTCATCCGGGCGGGATATGAAATAATGTTAATTTCTGAACTTATAAGTGGAATGAATAAGTTGTTCTCAAAGATTTCGGCAGCGTTTGAGATGGCTCGACCGTGAGGCAATCTTGTGAAACTGGAGTATGGTTTCCTGTGAACTGCTTGTAGATAATATGGATGGCTTTATAAAATTGAAAAAAAGGGAAAGGAATCTGTATATATTGCTGTTCTTCTTATTGAAGTAAACACTGAGAGGTCAGAGATCAGATAAATCACCAAAATATATTCCATAGAGTCTTGTTCATAGTTGATTGATTTGACCCTACAGAACTCACCCACCACACCCAGCATCCAAAATACATAATCT ATGAATTCTGTAAGCACAAAATCTACGGCGGTGCTTTATCACTATCCATGTCCCGACGGCGCGTTCGCCGCTCTCGCCGCGCATCTCTACTTCTCCGCCGCTTCTCTACCCCCTCTCTTTTTCCCCAATACCGTCTACAATCCCCTCAGAACGGACCAGCTTCCCCTGCATCAAATTGACGACGTTTATCTTTTGGATTTTGTGGGGCCGTTTGGATTTGTTGAGGACCTATCTTCTAAAGTTAACAGAGTGATAATACTGGACCACCACAAGACGGCTCTTGAAAAGCTCAGCGATGAGTCTTCATTTGGTGAAAACGTGACTAAAGTTATAGATATTCAAAGAAGTGGAGCTACAATAGCTTTTGACTATTTCAAGCAAAAGCTAACACAAGATGCTCACGGGAATTTTGACGTTGGTTCTTCCCATTACAAAGTGCTAAATGAATTTGAGCGCATGAGGAGACTTTATGAATACATTGAGGATGGCGATCTTTGGAAGTGGAGTCTTCCAAATAGTAAAGCTCTTAGCAGTGGTTTCAAAGATTTGAATATTGAATATGATACCCTTTTGAATCCTAACTTATTTGATCAGTTACTATCTCTGGATATGGAGACTATGATTAGTCGAGGGATAGCAAGTTTAGCACACAAACAAAAATTAATAGAGGATGCTCTTTATCAATCGTATAGCATTACACTCGGTGGTGGAGCTTTTGGACGTTGTCTGGCTGTTGATGCAGATTCTATTTCAGAACTAAGGAGTGAATTAGGACACCAATTGGCTACTAAGAGTCAAAATTCAAATTTAAGAGGCATTGGGGCTGTTGTATACCGAGTCCCGGCACTTGGGAATGACCAGATGTTGAAAATAAGTCTCAGAAGTGTTCGTGACGAGGACACAACTCGTATCTCACAGGAATTCGGAGGTGGGGGCCATAAAAATGCGAGCTCCTTCATGTTAAGCTCAACAGAATTCCAGAAGTGGAAGATTTGA MNSVSTKSTAVLYHYPCPDGAFAALAAHLYFSAASLPPLFFPNTVYNPLRTDQLPLHQIDDVYLLDFVGPFGFVEDLSSKVNRVIILDHHKTALEKLSDESSFGENVTKVIDIQRSGATIAFDYFKQKLTQDAHGNFDVGSSHYKVLNEFERMRRLYEYIEDGDLWKWSLPNSKALSSGFKDLNIEYDTLLNPNLFDQLLSLDMETMISRGIASLAHKQKLIEDALYQSYSITLGGGAFGRCLAVDADSISELRSELGHQLATKSQNSNLRGIGAVVYRVPALGNDQMLKISLRSVRDEDTTRISQEFGGGGHKNASSFMLSSTEFQKWKI Homology
BLAST of CmaCh13G011130 vs. ExPASy Swiss-Prot
Match: Q5UPH8 (Uncharacterized protein R106 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R106 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 6.6e-09 Identity = 78/337 (23.15%), Postives = 138/337 (40.95%), Query Frame = 0
BLAST of CmaCh13G011130 vs. ExPASy TrEMBL
Match: A0A6J1KHR0 (uncharacterized protein LOC111495359 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495359 PE=4 SV=1) HSP 1 Score: 662.5 bits (1708), Expect = 9.0e-187 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of CmaCh13G011130 vs. ExPASy TrEMBL
Match: A0A6J1E7G5 (uncharacterized protein LOC111431421 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431421 PE=4 SV=1) HSP 1 Score: 646.7 bits (1667), Expect = 5.1e-182 Identity = 324/331 (97.89%), Postives = 328/331 (99.09%), Query Frame = 0
BLAST of CmaCh13G011130 vs. ExPASy TrEMBL
Match: A0A6J1EAN6 (uncharacterized protein LOC111431421 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431421 PE=4 SV=1) HSP 1 Score: 635.6 bits (1638), Expect = 1.2e-178 Identity = 324/349 (92.84%), Postives = 328/349 (93.98%), Query Frame = 0
BLAST of CmaCh13G011130 vs. ExPASy TrEMBL
Match: A0A6J1C7B4 (uncharacterized protein LOC111009057 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009057 PE=4 SV=1) HSP 1 Score: 589.3 bits (1518), Expect = 9.7e-165 Identity = 293/331 (88.52%), Postives = 311/331 (93.96%), Query Frame = 0
BLAST of CmaCh13G011130 vs. ExPASy TrEMBL
Match: A0A0A0LT85 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G032420 PE=4 SV=1) HSP 1 Score: 568.9 bits (1465), Expect = 1.4e-158 Identity = 289/337 (85.76%), Postives = 304/337 (90.21%), Query Frame = 0
BLAST of CmaCh13G011130 vs. NCBI nr
Match: XP_023001121.1 (uncharacterized protein LOC111495359 isoform X1 [Cucurbita maxima]) HSP 1 Score: 662.5 bits (1708), Expect = 1.9e-186 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 0
BLAST of CmaCh13G011130 vs. NCBI nr
Match: XP_023519513.1 (uncharacterized protein LOC111782904 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 650.2 bits (1676), Expect = 9.6e-183 Identity = 325/331 (98.19%), Postives = 328/331 (99.09%), Query Frame = 0
BLAST of CmaCh13G011130 vs. NCBI nr
Match: XP_022923824.1 (uncharacterized protein LOC111431421 isoform X2 [Cucurbita moschata] >KAG6584443.1 putative protein R106, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020032.1 hypothetical protein SDJN02_19000 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 646.7 bits (1667), Expect = 1.1e-181 Identity = 324/331 (97.89%), Postives = 328/331 (99.09%), Query Frame = 0
BLAST of CmaCh13G011130 vs. NCBI nr
Match: XP_022923823.1 (uncharacterized protein LOC111431421 isoform X1 [Cucurbita moschata]) HSP 1 Score: 635.6 bits (1638), Expect = 2.4e-178 Identity = 324/349 (92.84%), Postives = 328/349 (93.98%), Query Frame = 0
BLAST of CmaCh13G011130 vs. NCBI nr
Match: XP_038895461.1 (uncharacterized protein LOC120083693 [Benincasa hispida]) HSP 1 Score: 597.0 bits (1538), Expect = 9.6e-167 Identity = 303/336 (90.18%), Postives = 315/336 (93.75%), Query Frame = 0
BLAST of CmaCh13G011130 vs. TAIR 10
Match: AT1G53345.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in 75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi - 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37 (source: NCBI BLink). ) HSP 1 Score: 418.7 bits (1075), Expect = 4.4e-117 Identity = 209/330 (63.33%), Postives = 256/330 (77.58%), Query Frame = 0
BLAST of CmaCh13G011130 vs. TAIR 10
Match: AT5G09580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G53345.1); Has 53 Blast hits to 53 proteins in 12 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 162.5 bits (410), Expect = 5.6e-40 Identity = 106/325 (32.62%), Postives = 169/325 (52.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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