CmaCh13G009930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G009930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WUSCHEL-related homeobox 1-like
Location	Cma_Chr13: 7684742 .. 7687440 (+)
RNA-Seq Expression	CmaCh13G009930
Synteny	CmaCh13G009930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTATGATAACCCTCATCATCGTCACGTCGCTTTTCACTCTCCGCTCCCCAAAACACACTAAAACCAACAACCCTCTCCCCAGAATTCCACGCCTATCCTTTCCTTTCCTTTCCTCTTCCTTCTTCTTCAATGGCGCCTATCTCACTTCCCTCTAAAGCCTCCATTTTTGCACTCCCTTTCACCTCCTCTTCCAAACCCATCAAGGCTTTTTAACACCTCTCCTTCCTTTAACCAATATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGGTATCTTCTAATTCTCTCTCTTTTTCTACTTTTTGTTTCTTCTATTTTTCATGTGTTCATGTGTGGTTGTAGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGTCCGATCCCCTTACTACCCATCTCTTTGTAATCAACAAAATTCAAAAACATAAATTTACCAAATTTAATCCCTATTTTCATAATTTTTTCTATTTATTTTCACGGAAAATTAGAGCGACAATTCATCGATTCTATTACAATTCATAAGAAAAATATAATATAAAGTGTGAAACCAATTTAAAATTGGATAGCATTTTTACGAATTAAATGAACATCTCTTAACACAATTAGACGGAATATTTTTGGTAGGACAATGATTCCCTTTTTGAATTTTTTTTTGGGTTGTTCTAAACATTCTATTTGTTTGTTGAGATGTAAAGTCGTCGTCTTTTTTGTTTTACCTTTTGTGAACAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGTCTCTATTTTCTTTCTCTCACCTTCTTTCTTTATTTCCTCTTCCTTTTCCCAATACTATACTAATTGGTTCGAGAGAGGAACCGAACATTTCTTACAAGGGTGTGAAAACCTCTTTCTAACAATCACATTTTAAAACTGTGAAACTAATGACAATATTTGCTAACGATGAGTTTGGGCTCTTACAAATGGTATTAGAGCGAGTCACCAAGTTGTGTGTCAGCGAGGACGCTGGGCCCCTAACGGAGGTGGATCATGAGATACCATATTGCTTATAAGGGTATGAAAACTTCTCTTTAGTAGACGAGTTTTAAAACCGTGAGGTTGACCATATGATACGTTACGGGCCAAAACGGATAATATTTGCTAGTGATGGGATTGGACTATTACAAATGGTATTAGAGCCAATCATCAGGCGGTGTGCCAGCGAAGACGCTGGGTGGACTCTTAAAGGAGGTGGTTCATGAGATACCACATTGCTTATAAGGGTATGGAAACCTCTTTCTAGTACACACGTTTTAAAACTGTGAGACTAACAATGATACGTTACGGGCTAAAGCGGACGATATTTGCTAGCGATGGGATTGGACTATTACAAATGGTATCAGAGCCAATCATCGGGGTGGTGCGCCAACGAGGACACTAGGCCCACAAGGGGATGGATTGTGAGATCTCATATCGGTTAGAGAGGGGAATGAAACATTCCTTATAAGAGCGTGGAAACCTCTCATAACAGACACGTTTTAAAACCGTGAGGCTGACCACGATATGTTAGGGGCCAAAGTGGACAATATTTGCTAGCGATGAGATTGGACTATTACAAATGGTATCAGAGTCAATCATCGGGCTGTGTGCCTGCGAGGACACTGGACCCACAAAGGGGTGGATTGTGAGATCCCACATGGGTTAGAGAAGGGAATGAAGCATTCCTTATAAGAGTGAGGAAACCTCTCCTAATAGACACGTTTTAAAACTGTGAGACTGACCACGATACGTTACGGGCCAAAGCAGACAATATCTGCTAGCGATGGGATTGGGCTATTACAAATGGTATCAAAGCCAATCATCGAGCGATGTGCCAGCGAGGACACTGGGCTTCTAAGCGGGTGGATTGTGAGATCACACGTCGGTTAGAGAAGTAATTCTTACCAAGAATGAGAGAGAGAATAATTAGTGTAGAATAATTTATGGTAATGATTATGAAAACATCCCCATGCATGAGATGATGATGCGTTTTGAAGAAGAGAAGAAGAAAGCGGTTTGTTTGTTGGGAAATGAAAAGCCTCTAAAAAGCTGCATTCCTTCCTTTCTGTCGGCTCTATAGCTGCCTCTTACCAAACTTTGGACATCATTTTGGGCTCCGCGCCTTTCCATACAATGTTTTGGATTTATGCCTTTCTTTTCCACACAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA

mRNA sequence

GCTTATGATAACCCTCATCATCGTCACGTCGCTTTTCACTCTCCGCTCCCCAAAACACACTAAAACCAACAACCCTCTCCCCAGAATTCCACGCCTATCCTTTCCTTTCCTTTCCTCTTCCTTCTTCTTCAATGGCGCCTATCTCACTTCCCTCTAAAGCCTCCATTTTTGCACTCCCTTTCACCTCCTCTTCCAAACCCATCAAGGCTTTTTAACACCTCTCCTTCCTTTAACCAATATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA

Coding sequence (CDS)

ATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA

Protein sequence

MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHMATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTKNWAPSSNCTTLPEESAPIQPPSSPCTT

Homology

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BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44
Identity = 118/207 (57.00%), Postives = 134/207 (64.73%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFT-PRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHH 60
           MW MGYN+ G     ADSF   R+LRPL+PR  S    TAAVN       TN       +
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTS--CPTAAVN-------TNS--DHRFN 60

Query: 61  MATVT---DQTKRE---LNNAP--PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120
           MA VT   +Q KRE   LN+ P  PPV+VSSRWNPTP+QLRVLEELYR+GTRTPSAD IQ
Sbjct: 61  MAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES----AITADHSAREPGILERKD 180
            ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQME+     + +  S       ++KD
Sbjct: 121 QITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKD 180

Query: 181 SGSGRTVYEEQTKNWAPSSNCTTLPEE 195
               +    EQ KNW  S  C T PE+
Sbjct: 181 PPGYKV---EQVKNWICSVGCDTQPEK 188

[Close]

BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 74/166 (44.58%), Postives = 92/166 (55.42%), Query Frame = 0


Query: 39  AAVNPPFNLIHTNDFFSQFHHMATVTDQTKRELNNAPP--PVVVSSRWNPTPEQLRVLEE 98
           +   PP  L H  D     HH        + +++      P   + RWNPTPEQ+  LEE
Sbjct: 16  STTQPPLLLTHC-DINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEE 75

Query: 99  LYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHS 158
           LYR GTRTP+ +QIQ I ++LR+YG+IEGKNVFYWFQNHKARER KRRR+   AI   H 
Sbjct: 76  LYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKPHK 135

Query: 159 AREPGILERKDSGSGRTVYEEQTKNWAPSSNCTTLPEESAPIQPPS 203
                  + KDS SG     +QTK   PS   T  P+    + P S
Sbjct: 136 -------DVKDSSSGGH-RVDQTK-LCPSFPHTNRPQPQHELDPAS 171

[Close]

BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23
Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 18  SFTPRRLRPLLPR--------PLSSLSSTAAVNPPFNLIHTNDFFSQFHHMATVTDQTKR 77
           S + +RLRPL P+        P SS   T+A     N I  +            T  TK 
Sbjct: 24  SLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQ-----------TGPTKF 83

Query: 78  ELNNAPPPVVVS----SRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEG 137
           E    PP  + +    +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL +YGKIEG
Sbjct: 84  EHKRDPPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEG 143

Query: 138 KNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRT 174
           KNVFYWFQNHKARERQK++R    +++   S    G+     +   RT
Sbjct: 144 KNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRT 180

[Close]

BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 77  PVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHK 136
           P   S+RW PTPEQL +LEE+YR G RTP+A +IQ ITA L  YG+IEGKNVFYWFQNHK
Sbjct: 2   PQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61

Query: 137 ARERQKRRRQM 148
           ARERQ+ RR++
Sbjct: 62  ARERQRLRRRL 72

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BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21
Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0


Query: 77  PVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHK 136
           P   S+RW PTPEQL +LEE+YR G RTP+A +IQ ITA L  YG+IEGKNVFYWFQNHK
Sbjct: 2   PQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHK 61

Query: 137 ARERQKRRRQM 148
           ARERQ+ RR++
Sbjct: 62  ARERQRLRRRL 72

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BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A6J1E6X5 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE=3 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFP DSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSA EPGILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAPEPGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQPPSSPCTT 208
           NWAPSSNCTTLPEESAPIQPP +PCTT
Sbjct: 181 NWAPSSNCTTLPEESAPIQPPPTPCTT 207

[Close]

BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A6J1KJ87 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3 SV=1)

HSP 1 Score: 406.4 bits (1043), Expect = 7.3e-110
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQ 200
           NWAPSSNCTTLPEESAPIQ
Sbjct: 181 NWAPSSNCTTLPEESAPIQ 199

[Close]

BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A1S4DS26 (WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=1)

HSP 1 Score: 317.8 bits (813), Expect = 3.4e-83
Identity = 166/208 (79.81%), Postives = 179/208 (86.06%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPAD-SFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHH 60
           MWMMGYNDA DLNFP+D SF  R+LRPL+PRPLSS SS++         HTNDFFSQFHH
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSS---------HTNDFFSQFHH 60

Query: 61  MAT-VTDQTKRELNN-----APPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120
           MAT V DQ+KRELNN     + PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI
Sbjct: 61  MATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120

Query: 121 TAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESA--ITADHSAREPGILERKDSGSG 180
           T+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+   TADHSAR+  +LERKDSGSG
Sbjct: 121 TSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSARDLDVLERKDSGSG 180

Query: 181 RTVYEEQTKNWAPSSNCTTLPEESAPIQ 200
           RTVYEEQTKNW PS+NC+TLPEES PIQ
Sbjct: 181 RTVYEEQTKNWVPSTNCSTLPEESVPIQ 199

[Close]

BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.9e-83
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPAD-SFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHH 60
           MWMMGYNDA DLNFP+D SF  R+LRPL+PRPLSS SS++         HTNDFFSQFHH
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSS---------HTNDFFSQFHH 60

Query: 61  MAT-VTDQTKRELNN-----APPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120
           MAT V DQ+KRELNN     + PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI
Sbjct: 61  MATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120

Query: 121 TAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESA--ITADHSAREPGILERKDSGSG 180
           T+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+   TADHS R+  +LERKDSGSG
Sbjct: 121 TSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSGSG 180

Query: 181 RTVYEEQTKNWAPSSNCTTLPEESAPIQ 200
           RTVYEEQTKNW PS+NC+TLPEES PIQ
Sbjct: 181 RTVYEEQTKNWVPSTNCSTLPEESVPIQ 199

[Close]

BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A2H4MXZ4 (Mutant WOX1 transcription factor OS=Cucumis sativus OX=3659 PE=3 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 9.9e-83
Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPAD-SFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHH 60
           MWMMGYNDA DLNFP+D SF  R+LRPL+PRPLSS SS++         HTNDFFSQFHH
Sbjct: 1   MWMMGYNDAQDLNFPSDNSFNSRKLRPLIPRPLSSSSSSS---------HTNDFFSQFHH 60

Query: 61  MAT-VTDQTKRELNN-----APPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120
           MAT V DQ+KRELNN     + PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI
Sbjct: 61  MATSVADQSKRELNNVLSPSSSPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHI 120

Query: 121 TAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESA--ITADHSAREPGILERKDSGSG 180
           T+QLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES+   TADHS R+  +LERKDSGSG
Sbjct: 121 TSQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESSAITTADHSTRDLDVLERKDSGSG 180

Query: 181 RTVYEEQTKNWAPSSNCTTLPEESAPIQ 200
           RTVYEEQTKNW PS+NC+TLPEES PIQ
Sbjct: 181 RTVYEEQTKNWVPSTNCSTLPEESVPIQ 199

[Close]

BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_022923717.1 (WUSCHEL-related homeobox 1-like [Cucurbita moschata])

HSP 1 Score: 414.5 bits (1064), Expect = 5.5e-112
Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFP DSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSA EPGILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAPEPGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQPPSSPCTT 208
           NWAPSSNCTTLPEESAPIQPP +PCTT
Sbjct: 181 NWAPSSNCTTLPEESAPIQPPPTPCTT 207

[Close]

BLAST of CmaCh13G009930 vs. NCBI nr
Match: KAG6584322.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-111
Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFP DSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQ KRELNNAPPPV+VSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQNKRELNNAPPPVLVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSARE GILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREAGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQPPSSPCTT 208
           NWAPSSNCTTLPEESAPIQPP +PCTT
Sbjct: 181 NWAPSSNCTTLPEESAPIQPPPTPCTT 207

[Close]

BLAST of CmaCh13G009930 vs. NCBI nr
Match: KAG7019913.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-111
Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFP DSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPTDSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQ KRELNNAPPPV+VSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQNKRELNNAPPPVLVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSARE GILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREAGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQPPSSPCTT 208
           NWAPSSNCTTLPEESAPIQPP +PCTT
Sbjct: 181 NWAPSSNCTTLPEESAPIQPPPTPCTT 207

[Close]

BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_023001656.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima])

HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQ 200
           NWAPSSNCTTLPEESAPIQ
Sbjct: 181 NWAPSSNCTTLPEESAPIQ 199

[Close]

BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_023519654.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 395.2 bits (1014), Expect = 3.5e-106
Identity = 197/207 (95.17%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHM 60
           MWMMGYNDAGDL   +DSFTPRRLRPLLPRPLSSLSSTA VNPPFNLIHTNDFFSQFHHM
Sbjct: 1   MWMMGYNDAGDL---SDSFTPRRLRPLLPRPLSSLSSTAPVNPPFNLIHTNDFFSQFHHM 60

Query: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120
           ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY
Sbjct: 61  ATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRY 120

Query: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTK 180
           GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHS RE GILERKDSGSGRTVYEEQTK
Sbjct: 121 GKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSTREAGILERKDSGSGRTVYEEQTK 180

Query: 181 NWAPSSNCTTLPEESAPIQPPSSPCTT 208
           NWAPSSNCTTLPEESA IQPP +PCTT
Sbjct: 181 NWAPSSNCTTLPEESATIQPPPTPCTT 204

[Close]

BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 118/207 (57.00%), Postives = 134/207 (64.73%), Query Frame = 0


Query: 1   MWMMGYNDAGDLNFPADSFT-PRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHH 60
           MW MGYN+ G     ADSF   R+LRPL+PR  S    TAAVN       TN       +
Sbjct: 1   MWTMGYNEGG-----ADSFNGGRKLRPLIPRLTS--CPTAAVN-------TNS--DHRFN 60

Query: 61  MATVT---DQTKRE---LNNAP--PPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQ 120
           MA VT   +Q KRE   LN+ P  PPV+VSSRWNPTP+QLRVLEELYR+GTRTPSAD IQ
Sbjct: 61  MAVVTMTAEQNKRELMMLNSEPQHPPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQ 120

Query: 121 HITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMES----AITADHSAREPGILERKD 180
            ITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQME+     + +  S       ++KD
Sbjct: 121 QITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMETGHEETVLSTASLVSNHGFDKKD 180

Query: 181 SGSGRTVYEEQTKNWAPSSNCTTLPEE 195
               +    EQ KNW  S  C T PE+
Sbjct: 181 PPGYKV---EQVKNWICSVGCDTQPEK 188

[Close]

BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 7.6e-27
Identity = 74/166 (44.58%), Postives = 92/166 (55.42%), Query Frame = 0


Query: 39  AAVNPPFNLIHTNDFFSQFHHMATVTDQTKRELNNAPP--PVVVSSRWNPTPEQLRVLEE 98
           +   PP  L H  D     HH        + +++      P   + RWNPTPEQ+  LEE
Sbjct: 16  STTQPPLLLTHC-DINGNDHHQLITASSGEHDIDERKNNIPAAATLRWNPTPEQITTLEE 75

Query: 99  LYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHS 158
           LYR GTRTP+ +QIQ I ++LR+YG+IEGKNVFYWFQNHKARER KRRR+   AI   H 
Sbjct: 76  LYRSGTRTPTTEQIQQIASKLRKYGRIEGKNVFYWFQNHKARERLKRRRREGGAIIKPHK 135

Query: 159 AREPGILERKDSGSGRTVYEEQTKNWAPSSNCTTLPEESAPIQPPS 203
                  + KDS SG     +QTK   PS   T  P+    + P S
Sbjct: 136 -------DVKDSSSGGH-RVDQTK-LCPSFPHTNRPQPQHELDPAS 171

[Close]

BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24
Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0


Query: 18  SFTPRRLRPLLPR--------PLSSLSSTAAVNPPFNLIHTNDFFSQFHHMATVTDQTKR 77
           S + +RLRPL P+        P SS   T+A     N I  +            T  TK 
Sbjct: 24  SLSCKRLRPLAPKLSGSPPSPPSSSSGVTSATFDLKNFIRPDQ-----------TGPTKF 83

Query: 78  ELNNAPPPVVVS----SRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEG 137
           E    PP  + +    +RWNPT EQ+ +LE LY+ G RTP+A QI+HIT QL +YGKIEG
Sbjct: 84  EHKRDPPHQLETHPGGTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEG 143

Query: 138 KNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRT 174
           KNVFYWFQNHKARERQK++R    +++   S    G+     +   RT
Sbjct: 144 KNVFYWFQNHKARERQKQKRNNLISLSCQSSFTTTGVFNPSVTMKTRT 180

[Close]

BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22
Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 79  VVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKAR 138
           V S+RW PTPEQL +LEE+YR G RTP+A QIQ ITA L  YG+IEGKNVFYWFQNHKAR
Sbjct: 4   VASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHKAR 63

Query: 139 ERQKRRRQM 148
           +RQK R+++
Sbjct: 64  DRQKLRKKL 72

[Close]

BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 )

HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22
Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 81  SSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARER 140
           SSRWNPT +Q+ +LE LY+ G RTPSADQIQ IT +LR YG IEGKNVFYWFQNHKAR+R
Sbjct: 12  SSRWNPTKDQITLLENLYKEGIRTPSADQIQQITGRLRAYGHIEGKNVFYWFQNHKARQR 71

Query: 141 QKRRRQ 147
           QK++++
Sbjct: 72  QKQKQE 77

The following BLAST results are available for this feature:

BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6X7K0	1.8e-44	57.00	WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2	[more]
Q9ZVF5	1.1e-25	44.58	WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2	[more]
Q6X7J9	2.2e-23	42.26	WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1	[more]
Q70UV1	1.6e-21	69.01	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
Q6S3I3	1.6e-21	69.01	WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1	[more]

BLAST of CmaCh13G009930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6X5	2.7e-112	98.07	WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE...	[more]
A0A6J1KJ87	7.3e-110	100.00	WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3...	[more]
A0A1S4DS26	3.4e-83	79.81	WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=...	[more]
A0A0A0LVV6	9.9e-83	79.33	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE...	[more]
A0A2H4MXZ4	9.9e-83	79.33	Mutant WOX1 transcription factor OS=Cucumis sativus OX=3659 PE=3 SV=1	[more]

BLAST of CmaCh13G009930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923717.1	5.5e-112	98.07	WUSCHEL-related homeobox 1-like [Cucurbita moschata]	[more]
KAG6584322.1	6.1e-111	97.10	WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7019913.1	6.1e-111	97.10	WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023001656.1	1.5e-109	100.00	WUSCHEL-related homeobox 1-like [Cucurbita maxima]	[more]
XP_023519654.1	3.5e-106	95.17	WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh13G009930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18010.1	1.3e-45	57.00	WUSCHEL related homeobox 1	[more]
AT2G01500.1	7.6e-27	44.58	Homeodomain-like superfamily protein	[more]
AT1G46480.1	1.6e-24	42.26	WUSCHEL related homeobox 4	[more]
AT2G28610.1	1.5e-22	71.01	Homeodomain-like superfamily protein	[more]
AT5G59340.1	1.9e-22	71.21	WUSCHEL related homeobox 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 79..146 e-value: 1.6E-5 score: 34.4
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 82..141 e-value: 5.3E-20 score: 71.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 87..142 score: 10.997032
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 83..143 e-value: 4.04597E-7 score: 43.7713
None	No IPR available	GENE3D	1.10.10.60		coord: 81..148 e-value: 2.3E-10 score: 42.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 143..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 139..207
None	No IPR available	PANTHER	PTHR45940:SF13	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 54..164
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 54..164
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 81..148

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G009930.1	CmaCh13G009930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity