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CmaCh13G009930 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GCTTATGATAACCCTCATCATCGTCACGTCGCTTTTCACTCTCCGCTCCCCAAAACACACTAAAACCAACAACCCTCTCCCCAGAATTCCACGCCTATCCTTTCCTTTCCTTTCCTCTTCCTTCTTCTTCAATGGCGCCTATCTCACTTCCCTCTAAAGCCTCCATTTTTGCACTCCCTTTCACCTCCTCTTCCAAACCCATCAAGGCTTTTTAACACCTCTCCTTCCTTTAACCAATATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGGTATCTTCTAATTCTCTCTCTTTTTCTACTTTTTGTTTCTTCTATTTTTCATGTGTTCATGTGTGGTTGTAGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGTCCGATCCCCTTACTACCCATCTCTTTGTAATCAACAAAATTCAAAAACATAAATTTACCAAATTTAATCCCTATTTTCATAATTTTTTCTATTTATTTTCACGGAAAATTAGAGCGACAATTCATCGATTCTATTACAATTCATAAGAAAAATATAATATAAAGTGTGAAACCAATTTAAAATTGGATAGCATTTTTACGAATTAAATGAACATCTCTTAACACAATTAGACGGAATATTTTTGGTAGGACAATGATTCCCTTTTTGAATTTTTTTTTGGGTTGTTCTAAACATTCTATTTGTTTGTTGAGATGTAAAGTCGTCGTCTTTTTTGTTTTACCTTTTGTGAACAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGTCTCTATTTTCTTTCTCTCACCTTCTTTCTTTATTTCCTCTTCCTTTTCCCAATACTATACTAATTGGTTCGAGAGAGGAACCGAACATTTCTTACAAGGGTGTGAAAACCTCTTTCTAACAATCACATTTTAAAACTGTGAAACTAATGACAATATTTGCTAACGATGAGTTTGGGCTCTTACAAATGGTATTAGAGCGAGTCACCAAGTTGTGTGTCAGCGAGGACGCTGGGCCCCTAACGGAGGTGGATCATGAGATACCATATTGCTTATAAGGGTATGAAAACTTCTCTTTAGTAGACGAGTTTTAAAACCGTGAGGTTGACCATATGATACGTTACGGGCCAAAACGGATAATATTTGCTAGTGATGGGATTGGACTATTACAAATGGTATTAGAGCCAATCATCAGGCGGTGTGCCAGCGAAGACGCTGGGTGGACTCTTAAAGGAGGTGGTTCATGAGATACCACATTGCTTATAAGGGTATGGAAACCTCTTTCTAGTACACACGTTTTAAAACTGTGAGACTAACAATGATACGTTACGGGCTAAAGCGGACGATATTTGCTAGCGATGGGATTGGACTATTACAAATGGTATCAGAGCCAATCATCGGGGTGGTGCGCCAACGAGGACACTAGGCCCACAAGGGGATGGATTGTGAGATCTCATATCGGTTAGAGAGGGGAATGAAACATTCCTTATAAGAGCGTGGAAACCTCTCATAACAGACACGTTTTAAAACCGTGAGGCTGACCACGATATGTTAGGGGCCAAAGTGGACAATATTTGCTAGCGATGAGATTGGACTATTACAAATGGTATCAGAGTCAATCATCGGGCTGTGTGCCTGCGAGGACACTGGACCCACAAAGGGGTGGATTGTGAGATCCCACATGGGTTAGAGAAGGGAATGAAGCATTCCTTATAAGAGTGAGGAAACCTCTCCTAATAGACACGTTTTAAAACTGTGAGACTGACCACGATACGTTACGGGCCAAAGCAGACAATATCTGCTAGCGATGGGATTGGGCTATTACAAATGGTATCAAAGCCAATCATCGAGCGATGTGCCAGCGAGGACACTGGGCTTCTAAGCGGGTGGATTGTGAGATCACACGTCGGTTAGAGAAGTAATTCTTACCAAGAATGAGAGAGAGAATAATTAGTGTAGAATAATTTATGGTAATGATTATGAAAACATCCCCATGCATGAGATGATGATGCGTTTTGAAGAAGAGAAGAAGAAAGCGGTTTGTTTGTTGGGAAATGAAAAGCCTCTAAAAAGCTGCATTCCTTCCTTTCTGTCGGCTCTATAGCTGCCTCTTACCAAACTTTGGACATCATTTTGGGCTCCGCGCCTTTCCATACAATGTTTTGGATTTATGCCTTTCTTTTCCACACAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA GCTTATGATAACCCTCATCATCGTCACGTCGCTTTTCACTCTCCGCTCCCCAAAACACACTAAAACCAACAACCCTCTCCCCAGAATTCCACGCCTATCCTTTCCTTTCCTTTCCTCTTCCTTCTTCTTCAATGGCGCCTATCTCACTTCCCTCTAAAGCCTCCATTTTTGCACTCCCTTTCACCTCCTCTTCCAAACCCATCAAGGCTTTTTAACACCTCTCCTTCCTTTAACCAATATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA ATGTGGATGATGGGTTACAATGACGCCGGAGATTTGAACTTCCCCGCCGATTCCTTCACTCCTCGCCGCCTTAGGCCTCTCCTTCCTCGCCCTCTCTCTTCTCTTTCCTCCACCGCCGCCGTTAATCCTCCTTTCAACCTTATCCACACCAACGATTTCTTCTCCCAATTTCACCACATGGCCACCGTGACTGATCAGACCAAGAGAGAGTTGAACAACGCGCCACCGCCCGTCGTCGTCAGCTCGCGGTGGAACCCTACGCCGGAGCAGTTGAGAGTGCTGGAAGAATTGTATCGGCGGGGGACTCGAACTCCCTCCGCCGATCAAATTCAACATATCACTGCTCAGCTTCGTCGGTATGGTAAGATTGAAGGTAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGCCAGAAACGACGTCGTCAGATGGAATCCGCCATCACCGCCGACCACTCCGCTCGTGAACCCGGAATCCTTGAAAGGAAAGATTCAGGGTCGGGTAGGACAGTGTATGAAGAACAGACCAAAAACTGGGCACCCTCTTCCAACTGCACAACACTTCCGGAGGAATCTGCTCCAATTCAACCACCGTCAAGCCCTTGCACCACATAA MWMMGYNDAGDLNFPADSFTPRRLRPLLPRPLSSLSSTAAVNPPFNLIHTNDFFSQFHHMATVTDQTKRELNNAPPPVVVSSRWNPTPEQLRVLEELYRRGTRTPSADQIQHITAQLRRYGKIEGKNVFYWFQNHKARERQKRRRQMESAITADHSAREPGILERKDSGSGRTVYEEQTKNWAPSSNCTTLPEESAPIQPPSSPCTT Homology
BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6X7K0 (WUSCHEL-related homeobox 1 OS=Arabidopsis thaliana OX=3702 GN=WOX1 PE=2 SV=2) HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44 Identity = 118/207 (57.00%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q9ZVF5 (WUSCHEL-related homeobox 6 OS=Arabidopsis thaliana OX=3702 GN=WOX6 PE=2 SV=2) HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25 Identity = 74/166 (44.58%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6X7J9 (WUSCHEL-related homeobox 4 OS=Arabidopsis thaliana OX=3702 GN=WOX4 PE=1 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.2e-23 Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 1.6e-21 Identity = 49/71 (69.01%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A6J1E6X5 (WUSCHEL-related homeobox 1-like OS=Cucurbita moschata OX=3662 GN=LOC111431341 PE=3 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 2.7e-112 Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A6J1KJ87 (WUSCHEL-related homeobox 1-like OS=Cucurbita maxima OX=3661 GN=LOC111495730 PE=3 SV=1) HSP 1 Score: 406.4 bits (1043), Expect = 7.3e-110 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A1S4DS26 (WUSCHEL-related homeobox 1-like OS=Cucumis melo OX=3656 GN=LOC103501753 PE=3 SV=1) HSP 1 Score: 317.8 bits (813), Expect = 3.4e-83 Identity = 166/208 (79.81%), Postives = 179/208 (86.06%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A0A0LVV6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G042780 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.9e-83 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of CmaCh13G009930 vs. ExPASy TrEMBL
Match: A0A2H4MXZ4 (Mutant WOX1 transcription factor OS=Cucumis sativus OX=3659 PE=3 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 9.9e-83 Identity = 165/208 (79.33%), Postives = 178/208 (85.58%), Query Frame = 0
BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_022923717.1 (WUSCHEL-related homeobox 1-like [Cucurbita moschata]) HSP 1 Score: 414.5 bits (1064), Expect = 5.5e-112 Identity = 203/207 (98.07%), Postives = 204/207 (98.55%), Query Frame = 0
BLAST of CmaCh13G009930 vs. NCBI nr
Match: KAG6584322.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-111 Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of CmaCh13G009930 vs. NCBI nr
Match: KAG7019913.1 (WUSCHEL-related homeobox 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-111 Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0
BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_023001656.1 (WUSCHEL-related homeobox 1-like [Cucurbita maxima]) HSP 1 Score: 406.4 bits (1043), Expect = 1.5e-109 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh13G009930 vs. NCBI nr
Match: XP_023519654.1 (WUSCHEL-related homeobox 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 395.2 bits (1014), Expect = 3.5e-106 Identity = 197/207 (95.17%), Postives = 199/207 (96.14%), Query Frame = 0
BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 ) HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45 Identity = 118/207 (57.00%), Postives = 134/207 (64.73%), Query Frame = 0
BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT2G01500.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 118.2 bits (295), Expect = 7.6e-27 Identity = 74/166 (44.58%), Postives = 92/166 (55.42%), Query Frame = 0
BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 ) HSP 1 Score: 110.5 bits (275), Expect = 1.6e-24 Identity = 71/168 (42.26%), Postives = 92/168 (54.76%), Query Frame = 0
BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 104.0 bits (258), Expect = 1.5e-22 Identity = 49/69 (71.01%), Postives = 58/69 (84.06%), Query Frame = 0
BLAST of CmaCh13G009930 vs. TAIR 10
Match: AT5G59340.1 (WUSCHEL related homeobox 2 ) HSP 1 Score: 103.6 bits (257), Expect = 1.9e-22 Identity = 47/66 (71.21%), Postives = 57/66 (86.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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