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CmaCh13G009740 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTAACCCTTCTTTACTTTCTCTCTCCTCTTTCTCTCTCCTCTTCTTCTTCTTCTTCATCATCTTCTTCTTTCTTCATAACACAAAAACCTAACAAAACCCACATCGAAAGCCCTCAGCTTTTGAAATTTGTATATATCAAAAAAGAAAAAAAAAAAAGTAAAGATGTTGGAGAAAGGCATTCTTGTTCCTGATCTATCACTTCAAATTAGCCCTCCCATAACTGAACCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTCGACACTGAGCTTTCTCTCTCCAACAATTCAACCGTGGCGGTCGACGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCAACATATTTGAACCAAAACCAACCGTCGCCATCGCCGTCGTCGTCGCTGCAGCCTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCGGTTGGGAGGTATAATGGGATAACAATGGAGGCCTTGAGAAATCACCAGCTGAATCAGAATCAGAATCAAAATCAGTTTGGTTTTCAAAATCATCAAAGCCTTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCAAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGTATTCTCTCATTCCATCTCCTTTTTTCTTTCTCCTCTCCATCTCGATCTCCGTTAACTATCAAACTATGGCTCGAATTTGATGACATTAGCCATATGTATCACAATAATTAGTGTCTTATCTACTTATTTATAGATCGAACCCCAATAAATTTGATTGTTTTTACACGATCAGGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGTCATTTACAGGTAATTTCATTGAAAACCCACAATTTATTTCAGGATTTTAATCGAAACCCACAACTTATTTCAGGATTTTAATTGAAACCCACAACTTATTTCAGGATTTTAATTGAAACCCACAACTTATTTCAGGATTTTAATCGAAACCCACAACTTATTTCAGGATTTTAATTAAAACCCACAACTTATTTTAGGATTTTAATTGAAACCCACAATTTATTTCAGGATTTTAATCGAAACCCATAATTTATTTCAGGATTTTAAACGAAACCCATTTGATATCTCTCCTTCTTCCCTGCAAAAAAGCTTCTTTTTTTTTTTTTTTTTGGTTCTCTCTTTCTCTCTCTATCTCAGTGAAGAGGAATCCCTGTGGCACAGTTACCAAAGAAGAGAGAAATGAATGAATGATTCAGAAGCTGAAGAAAGTCTGTATTTAGTTCACAAAACAGGACAATTTCTTGTTTTAGAGAGAGAAAGAAGAGAGAGAAAATGGCATCATTTCTCAATAATAGAACCATTTCCCCAAATTTACTTTCCACACCAAACAAAAACAATACAAATCCCCATTTCAAAGCCTCTACTTCACTTTATTTTAGAGTTCCATAATAACCAAATCATTTCATTTCACCTCTCATTTCCAAATGGGTCACTCAAAAAGTTTTGATCTTTAAATGTTTGGTAATTTTCATTATTCAGACACAAAACCACACATGTTTTTCTCTTTTGTTCTTAACCCTTTTCTTGTCTTCTTTTTCAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGGTAACAAATTCCAAATCCTTACCAATCTCAAAACAAATTCTTCTTAACTCTTAATTAAACAACATAATGCTCATTTTCTAGGTTTCAAACAACCTAGGAAACATGTTTGCCTTAAAAATAATCATTAAAATTTGATGGGTTTTTTTTTTTTTTTTTTTTAATGGATGAACTATGAATCAGAAGGGTCTGGCGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGGTTAATAATCTCTCTCTTTCTCTCTCTACATTAATTTTTGTTGGTCTTTTATGTCTGTTGGGTTAGTACTATATGTTTTTTTTTATTGGGTTGGTAAAAAAAATTCAAATTTTCTATAAAGAGCTACCCTTTGTTGTAACAGCTTTACTTTCCCTCCTTTCCTTTTTTCTCTTACCACTTTTCTTTGAACCCCTTTGACTAAATATTGATGTTCGTTCATTATGTTTGTGATTTGTAAACAGTTCTGTGTTTGGTTTTTGTAAAAAGTTAGTGGGTAGCATGAAATTGTAGGTTTCCCAGCTCCTATAGGTTTAATGTATCCTTTTCAGTGTCATTTTCGAGCCTATAAGATAACCGTCCAAACTCAACGTTAGTACATATTGTCCGTTTTGACTGGTTACGTATCGTCGTCAGCCTTACGATTTTAAATCACGTCTGCTAGGGAGAGGTTTCTACACCCTTGTAAAAAAATGTTTCGTTTCTCTCTTCCACCGATGTGAGATCTCACCATCCACCCCCTTTGGGAGTTTGGCGTTCTCGCTGAAACATCACCCTATGTTTGACTTTATACCATTTATAATAGCTTAAGCCCACCACTAGAAGATATTATCCACTTCAACCCGTTTGCTGAACTCAACCAAAAATTAGTGTCTTAGCTACAGTGTCAATAACATCAACTAGCGGTGGGTTTGAATGGTTTCAGATCGTCCACCGTAACTCTACCAAAAATTAACTCATCTCGTAGAAGAAGTGGGTTTTTCTACCATGATAGGTTAAATTTTCACTTTAACCAGAAGTGCAGTCTTTTGCTAGGCCATTTCCTTTTAAATTAATGAATAATCAGCTTTAATATATAGTCTCACATGCTAGCATTACCCAAACAGAAAAGCATAGGTTAAGAAATTTGGATTTCATTTACTGTATACTTATAGTATAATATAATTATTGTATTCAAATGCTTCATTATCATCACATTAATTTAATGTTTCAGAAGAGCATGGGAGAAAGGCTCTCCAACAAGAGCTAATGTGTTTGGATCAGAAAATCAACCACAGGTATAAACTCTCTTTCAATAGTATATTTCATGTAATTTACTCGGTATATCATATGATAAGTCAAAGAAGCTCAATTAGAATCACTGTGCTAAGAACCACGAACCCCCACAATGGTATGATCTTATCCATTCTATGCATAACCTCTCATTCTCGTGGTTTTGCTTTGAGTAGTTTCACAAAAGACCTCGTACCAATGAAAATAGTGTTGTCGTGGGATTATGTCTCTCAATAACCCTAAACCGTTTAATTTTTTTTTTCCAGGAATGCTATGAATTAGGTCATTCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAAATCCAACCTTAAAACCTCA CACTTAACCCTTCTTTACTTTCTCTCTCCTCTTTCTCTCTCCTCTTCTTCTTCTTCTTCATCATCTTCTTCTTTCTTCATAACACAAAAACCTAACAAAACCCACATCGAAAGCCCTCAGCTTTTGAAATTTGTATATATCAAAAAAGAAAAAAAAAAAAGTAAAGATGTTGGAGAAAGGCATTCTTGTTCCTGATCTATCACTTCAAATTAGCCCTCCCATAACTGAACCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTCGACACTGAGCTTTCTCTCTCCAACAATTCAACCGTGGCGGTCGACGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCAACATATTTGAACCAAAACCAACCGTCGCCATCGCCGTCGTCGTCGCTGCAGCCTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCGGTTGGGAGGTATAATGGGATAACAATGGAGGCCTTGAGAAATCACCAGCTGAATCAGAATCAGAATCAAAATCAGTTTGGTTTTCAAAATCATCAAAGCCTTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCAAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGTCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGAAGGGTCTGGCGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGAAGAGCATGGGAGAAAGGCTCTCCAACAAGAGCTAATGTGTTTGGATCAGAAAATCAACCACAGGAATGCTATGAATTAGGTCATTCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAAATCCAACCTTAAAACCTCA ATGTTGGAGAAAGGCATTCTTGTTCCTGATCTATCACTTCAAATTAGCCCTCCCATAACTGAACCATCTTCTTCATTTCATATTTGGAAGCAACCTCAAGTACCTCAAGTCGACACTGAGCTTTCTCTCTCCAACAATTCAACCGTGGCGGTCGACGTTTCCCCGGATCGGTTCCAACCCATTAGAGGAATCCCACTTTACAGTAATGGGTTGTTGTCTTCTTCAACATATTTGAACCAAAACCAACCGTCGCCATCGCCGTCGTCGTCGCTGCAGCCTCCTTTGAATTCTAGGGCGTTTCATCAACAGCCTCCGGTTGGGAGGTATAATGGGATAACAATGGAGGCCTTGAGAAATCACCAGCTGAATCAGAATCAGAATCAAAATCAGTTTGGTTTTCAAAATCATCAAAGCCTTCAATTTGGGGTTTCGGATTTTTCTTGTAATAATAGATCGAGATTGTTCATGCCAAGGATTCAAAGCCGACGAAATGCTAGGGCTCCAAGGATGCGTTGGACTTCCTCTCTTCATGCTCGTTTCATTCGTGCTGTTGAGCTCCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGCTGGAGCTAATGGATGTGAAGGATCTCACTCTAGCTCATGTGAAGAGTCATTTACAGATGTATCGTACTGTTAAAAACACCGACAAACAAACAGCTTCTTCTGAAGGGTCTGGCGAAGAAGATTTCTTGCCTGCAACGCCAACCCCACACCATGAAGCGAGCTGTTTGCTCAATCATAGAAGAGGGTTTAGTGCATCTTTGGAGGCTGATGTTAATGGATCAGCACCTTCCATTAATAACCACTGTAACTCTTCAAGAAGAGCATGGGAGAAAGGCTCTCCAACAAGAGCTAATGTGTTTGGATCAGAAAATCAACCACAGGAATGCTATGAATTAGGTCATTCGGGGTTGAATCTAAACGACAGTCCAAGCAAGGATTTGTGTTCGAGACACAATTGGGACAACTAA MLEKGILVPDLSLQISPPITEPSSSFHIWKQPQVPQVDTELSLSNNSTVAVDVSPDRFQPIRGIPLYSNGLLSSSTYLNQNQPSPSPSSSLQPPLNSRAFHQQPPVGRYNGITMEALRNHQLNQNQNQNQFGFQNHQSLQFGVSDFSCNNRSRLFMPRIQSRRNARAPRMRWTSSLHARFIRAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKQTASSEGSGEEDFLPATPTPHHEASCLLNHRRGFSASLEADVNGSAPSINNHCNSSRRAWEKGSPTRANVFGSENQPQECYELGHSGLNLNDSPSKDLCSRHNWDN Homology
BLAST of CmaCh13G009740 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 8.3e-36 Identity = 110/244 (45.08%), Postives = 139/244 (56.97%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy Swiss-Prot
Match: Q9C616 (Probable transcription factor KAN2 OS=Arabidopsis thaliana OX=3702 GN=KAN2 PE=2 SV=1) HSP 1 Score: 137.9 bits (346), Expect = 2.1e-31 Identity = 89/174 (51.15%), Postives = 105/174 (60.34%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy Swiss-Prot
Match: Q0J235 (Probable transcription factor RL9 OS=Oryza sativa subsp. japonica OX=39947 GN=RL9 PE=2 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 4.7e-31 Identity = 99/226 (43.81%), Postives = 122/226 (53.98%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy Swiss-Prot
Match: Q941I2 (Probable transcription factor KAN3 OS=Arabidopsis thaliana OX=3702 GN=KAN3 PE=2 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 3.1e-27 Identity = 81/181 (44.75%), Postives = 100/181 (55.25%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.5e-24 Identity = 79/164 (48.17%), Postives = 97/164 (59.15%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy TrEMBL
Match: A0A6J1KJM5 (transcription repressor KAN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 670.2 bits (1728), Expect = 4.4e-189 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy TrEMBL
Match: A0A6J1KRL3 (transcription repressor KAN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 663.7 bits (1711), Expect = 4.1e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy TrEMBL
Match: A0A6J1KHN0 (transcription repressor KAN1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111495831 PE=4 SV=1) HSP 1 Score: 663.7 bits (1711), Expect = 4.1e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy TrEMBL
Match: A0A6J1E6V5 (transcription repressor KAN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431329 PE=4 SV=1) HSP 1 Score: 634.8 bits (1636), Expect = 2.0e-178 Identity = 321/337 (95.25%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CmaCh13G009740 vs. ExPASy TrEMBL
Match: A0A6J1E751 (transcription repressor KAN1-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111431329 PE=4 SV=1) HSP 1 Score: 628.2 bits (1619), Expect = 1.9e-176 Identity = 320/337 (94.96%), Postives = 323/337 (95.85%), Query Frame = 0
BLAST of CmaCh13G009740 vs. NCBI nr
Match: XP_023001796.1 (transcription repressor KAN1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 670.2 bits (1728), Expect = 9.0e-189 Identity = 333/333 (100.00%), Postives = 333/333 (100.00%), Query Frame = 0
BLAST of CmaCh13G009740 vs. NCBI nr
Match: XP_023001797.1 (transcription repressor KAN1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 663.7 bits (1711), Expect = 8.4e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmaCh13G009740 vs. NCBI nr
Match: XP_023001798.1 (transcription repressor KAN1-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 663.7 bits (1711), Expect = 8.4e-187 Identity = 332/333 (99.70%), Postives = 332/333 (99.70%), Query Frame = 0
BLAST of CmaCh13G009740 vs. NCBI nr
Match: XP_022923697.1 (transcription repressor KAN1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 634.8 bits (1636), Expect = 4.2e-178 Identity = 321/337 (95.25%), Postives = 324/337 (96.14%), Query Frame = 0
BLAST of CmaCh13G009740 vs. NCBI nr
Match: XP_022923699.1 (transcription repressor KAN1-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 628.2 bits (1619), Expect = 3.9e-176 Identity = 320/337 (94.96%), Postives = 323/337 (95.85%), Query Frame = 0
BLAST of CmaCh13G009740 vs. TAIR 10
Match: AT5G16560.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 152.5 bits (384), Expect = 5.9e-37 Identity = 110/244 (45.08%), Postives = 139/244 (56.97%), Query Frame = 0
BLAST of CmaCh13G009740 vs. TAIR 10
Match: AT1G32240.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 137.9 bits (346), Expect = 1.5e-32 Identity = 89/174 (51.15%), Postives = 105/174 (60.34%), Query Frame = 0
BLAST of CmaCh13G009740 vs. TAIR 10
Match: AT4G17695.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 124.0 bits (310), Expect = 2.2e-28 Identity = 81/181 (44.75%), Postives = 100/181 (55.25%), Query Frame = 0
BLAST of CmaCh13G009740 vs. TAIR 10
Match: AT5G42630.1 (Homeodomain-like superfamily protein ) HSP 1 Score: 115.2 bits (287), Expect = 1.0e-25 Identity = 79/164 (48.17%), Postives = 97/164 (59.15%), Query Frame = 0
BLAST of CmaCh13G009740 vs. TAIR 10
Match: AT5G42630.2 (Homeodomain-like superfamily protein ) HSP 1 Score: 115.2 bits (287), Expect = 1.0e-25 Identity = 79/164 (48.17%), Postives = 97/164 (59.15%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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