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CmaCh13G009060 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGCGCGGGAAGATGGCAAGCACAGTCTCGTTCTCTTTGAGGACTTGTATCAAACAGTTTTCGGTCCTTTCGAAGCGAACGCCGTTCGATTTTCCGATCAGAACCAGATTTAAGCGATTCATCGTCACCTGCAATACTCCGAGACATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTCTTCGTCGACGCTCTTCTCGAATGGAACAAGGTACTTGGCCTCTCCCTTTCGTTGGTTTCATTTCCTGAAATTTTATTGGTATTTCTTCTTGTTAGCTTTAATTTGATGGCCGTATGGTTGAATTTTCATAGAAAATGAATCTTACGGCCGTTACGGAAGAAAGCGAAGTGATGGAAAGGCACGTTGAGGATTCTCTCGCGATTATACCTCCAATTCGGAATCTGTACTCGTCGCATTGTTCGACGATTCCATGCGACGGCATTAAACTTCTTGATGTTGGAACGGGGGCCGGACTTCCTGGATTGATTATAGCTATTGCTTGCCCAGGTCAACATAATCGATTATTATGATGATGAAAATGCATTATGTGCTCTAGGGATCATTCTTTGATATAACGTATATTGATTGCTTCCTTATCCTTTCTTTTCTTTTGGGGGTTTAACTTGGGCTATTTGGATGGACTAGAATGGCAAGTAACGTTGATGGAATCTATGAATAAGCGGTGCCTTTTCTTGGAGCATGCGGTCGGTCATACCGGTTTGACAAATGTTCATGTTGTGCGAGGAAGAGCAGAGGTACGTGGACATTAGCGTTTACGCAATTAAACACCCTGACGTAATTAGCCATTCAAGTTTGATTCTCTTGTCTTGATTAGTTCATATACTTAATGGTTACTATCTATTTTATTAAACAACGAACAAAATTTCTAGATTTTGCGATGTACCAATAGTATGTCTTCAAAAATGTGGAAGAGACACCTTTTTTGCATGAGTTGTGGTAATGAGATTCAACAGTTCCTGGAAACGGTCTCGATTTCATCATTATATTCACTGTATTGTGAATACTCGAAGAAGTTAAAGTTATAATGAGGGTTCCCCTCGAGATCAATTTTTATTTCCTATGAAGTATTTGATTTATTATTTGAGAGAGAAGGGGAAGAACACTTGCTCGTGGCTCCAAACTTTATTTGTATAACATTTAATGTGGCAGTGATATATCCTGATGTAGGGCAGAATCTGGGACACGATCTTTTCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAATTTTAGGTACCATCTAATTTGATATGCATAAGTTCTACGAATCTAAGTTGTTTTACTTTTGCTTATTATTTTTCACTGATATCTTTTCTTCAGCTGAATACTGTCTTCCTATGGTTCGTGTTGGGGGTTTGTTTTTAGCTGCCAAGGGCCATGACCCTCTTGTATGTTCTCTATCCTATCCATTAGCATTTTGAACGTCTACTCTCTGATTGTCTTGTCCTATTATTTTGGGACTGTATCCACTTCATTACCATCATTGATTCCGTTATTAATTGTTTTCTCGAGGTAGAGGCATTTGATGTGAAAATCTCCATTTCACTTCAATTTATTGTAGTTATTTGTTTTATTTTCCATACTTGAAAGTAGTCCTCATTTACAAATTATAATGCACAACAAGATATTATTTTTTATATGGGCAATCTGAAGTATTTGTACAGATGCTAAACAATATTGTAGTGAATAATATAAATATAAAGATCTTGTGGTTGTGGATAGGTGGTAATTGTACCTTTTTACCACCATTTAAAATAGACTCCTTTTGATTTAGATTTGACCTCTTGTATACTTCGTGATAATGATGCAATGAAGAATCTTGTTTCTAATTGTGGAGATTTCTTTGAGCTGAATTATTTTGAGTTGGCATATATCTAATTCATGTTGAGAAAGTTTATTTGCTTAAGTGGTACTCCTTTGGATTTTATATTTTATATAATCTTGTTGATTTTTGGTTTGTTTCCTTTTTTTTTTCTCTTTTGCAATTTTCGCATTGTCAGGAAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCTTCGTTACTGCAAATATGCCCTGGTGTGTTTGTCTTTCTGTTGGTTTTCCTGCAATGTCACAATCTCATGTGTACAGTAACAAAGTCAAAAGATTTGTGTGTAATTGAGGATTGCTTTATAGTACAGAGGTCTCTTCCTGAAAAGACACTCCCACTCTTAGCCCGTAGGAGTTGGTTTTCTAGATACTTATACTAAGTTATTCCCATGTGTACTTGAACTACAAGAAATATTCTGATGCTGACAATTTCTGCTACCGTATCTATATCAACGTGATGTATAAACTACTGAATTGGCCATTAAATATTTGGAATTTGCACCCATTCCAATGGATTTTGTCAAACTTATTTTGTTTTTGGCTTATGTTTTGCTTGCAAGAATTTGAATCTTTGTTCTAGTCTTTGGTTTGATTTATAGGATTATCTTTGATTCTCAGATATGGGTTGTTCGTCTAATTTGCACGTAGAACTTAACAAATTTGTATTATTCTTGTGGAAAAATCTTTTTCTCGAGCAAAATTTGATTTAAAATTATTTCCTTAACTGTACTAGATTATTTTATTTACAGTTCGATCCACAAAGTAATTCACCTTATGCTTTAAATTTAACTTTACCCCAACTCTATGATGTAATATTGTCTGAAGGTCCTTTTTTTTCTTATGCAGTGGAATCACATAGTCCATATGGGCAGCGAAATGCCGTTGTTTGTTTAAAAGAACGGCACACTCCCAGGAAGTATCCTCGTGATCCAGGTACACCAGCAAAAGCCCCGTTATAATCATCTGGGTGTTCAGTTTGGTTTCAATTCACGTGTTCGTCTCAACGTCAACGAGTTGTTTATTATGCAAAATGCTTCAGGTGTGTGAGTCTATGATAATCACCTGAAGATAGACACCCTGTTATTTGTTGTGCATATCAAACATCATTTCACCCCGAGTAATTCTTGTATGACATTTGGTTATTAAATTAGTATTCAAATTTATTTCCATTTTGGATTTATGTGTTGGTCTTTCGCCTCCCGCCATTACCCCACCAAATTCATCTCTTTCTCTACATTGACATATATAACTCCACCCTTGAAAAGGAAAGGATGATGAAATTTAGTACAACATTTACTTTTTCGCATGAACTCTTATTTTTCTAAGAGTAGTATAAAGTAAATCTGAGTTCTTGATAAAATTAGTGCTAAGGCGACAAAAATAACCATCATTATTTCATTGAGAGAGTGTCTAAAATATACTACTAGAGTTGATTTTTGGCTGCCATAATCCTTGTTGAGGCATGGGGAGTTGCTTTTTGGAATATTTTATAGGTAAAGACTTCTGATCATCCATAAGATGAACGTTTATTTGTCTTCCTCATAGCTTTTTATAGATGCGATGGTGTAAATGATTTGCCATCTAATCACTTTTCTCATGTCCAAGTTATCTATTATTGCACTGCACCACGGACAAAGGAACAGACCTTGCTGAACCCAACCTGGAAAGATTCGCCCAGTGGAAAAGTTTGATAAACCGTGTCGCCAGGTATTAAGAACATAAGCTGTACTTATAATTGCTGGATTAACTTGGTTTGAGTTTAAGTATATGATTAACCTTGTTAATATATAGAAATTTGGATGCAGTGTCTTATTCGATGACGATGTTTAGCTAGACTTCCAAGTTTTGAATTAATTAACACCACTCTCTTTAGTCAAAAGTAACGAGCTATTGTTTGAGATAATCTTGTTTATTTCAATCTTCATGCAAATATCTCCCAGTTTTAGGCGACAGGTTTGGTATGGAAGTGTCCATCCATTTTTCTTGTATTGTTTATTGAGACTTTTGGGTCTTATCATTTCTTTGGCGAGTGATTAATTAAGATATAATTGTGAATATTGCATTTCCGTCCTTGCATTCCAAGGCATTCGATTTTAGTTTTTATATAGTAAAAGTACGCATTTTTTTTTTCTAGATATAGTTGTATCCATTTCATTACTTCATTACTTATTCTATTTAAATAGTAAACTTTTATAGTTTCTTATTATTTAATATATGTTGTAGCTTCAAGCTAGAAGGTTATGAATTTTTTTCCTTCAATAGTTGTAGAGGTGAGGATGTAAATTTTCAATTTTAAGAGAATATATTTAACTTAACTTCTTTTCGTTAGATAGAATACCTCTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCAGGGAACAAATAATCTGTGGAAAACTAAAGGGAGGTTGGTATATAAAAAATGACCGTTTCCTAACCTCCCTCGACTTGTAAATCTGTAATATGCCAAGTAATAGGTAAAGTCTTTCGCGCTTGATTTTTATAACATGTTTCAGGTGAAGATATTTTCAATTGATCCTTATGATATTTGGCTGCCACGTTTGCATAGTACAATAACAACTCGTTAATTTTCTTTTACTTTTTTTTATTTCTTTTTTTTTGAAAAAGAAGCCATTAATGGCAGCTTCTCGTTCAATTATTTCATTTATATAAGTGTTTCGACTTATGTATGTTAAATTTACTAGGTATTAAGACATTTACTCGACGTAGAGGCCAGGTTAGAGGCCAGGTTTGAACTCTCCATCCTTATTTGTTGAACTTTTTTAAAAAAATCTCCGTCTTGCTATATTTTAAATTTAAAATTTGACTTTGATGTGAACGATTTGTTTAATTATATGGTTTTTTTTTTATAATTAATATGGTGTTTTTTTGAATTGAAGGGGTAGATGCTGGAAATTTTGACAATTGTAAGGATAAATTGTTATTATATGCATGAATGTCTGCAGCATTAATAATTTAATTATGGTCCATGCCATATATTAATTCTTGTTTTACCAATAGAAGCCCCACAATCCAACTAATTCTTGTTTGTAAAGAACTTATTTGCACAATTTTTTATGAATTCCACTGATACAAGAAAGGTATCATTTAAGGGGAAAAGTGCAAAAAAGATGTTGCAAAGAAG GAGCGCGGGAAGATGGCAAGCACAGTCTCGTTCTCTTTGAGGACTTGTATCAAACAGTTTTCGGTCCTTTCGAAGCGAACGCCGTTCGATTTTCCGATCAGAACCAGATTTAAGCGATTCATCGTCACCTGCAATACTCCGAGACATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTCTTCGTCGACGCTCTTCTCGAATGGAACAAGAAAATGAATCTTACGGCCGTTACGGAAGAAAGCGAAGTGATGGAAAGGCACGTTGAGGATTCTCTCGCGATTATACCTCCAATTCGGAATCTGTACTCGTCGCATTGTTCGACGATTCCATGCGACGGCATTAAACTTCTTGATGTTGGAACGGGGGCCGGACTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAATCTATGAATAAGCGGTGCCTTTTCTTGGAGCATGCGGTCGGTCATACCGGTTTGACAAATGTTCATGTTGTGCGAGGAAGAGCAGAGAATCTGGGACACGATCTTTTCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAATTTTAGCTGAATACTGTCTTCCTATGGTTCGTGTTGGGGGTTTGTTTTTAGCTGCCAAGGGCCATGACCCTCTTGAAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCTTCGTTACTGCAAATATGCCCTGTGGAATCACATAGTCCATATGGGCAGCGAAATGCCGTTGTTTGTTTAAAAGAACGGCACACTCCCAGGAAGTATCCTCGTGATCCAGGTATTAAGACATTTACTCGACGTAGAGGCCAGGTTAGAGGCCAGGGGTAGATGCTGGAAATTTTGACAATTGTAAGGATAAATTGTTATTATATGCATGAATGTCTGCAGCATTAATAATTTAATTATGGTCCATGCCATATATTAATTCTTGTTTTACCAATAGAAGCCCCACAATCCAACTAATTCTTGTTTGTAAAGAACTTATTTGCACAATTTTTTATGAATTCCACTGATACAAGAAAGGTATCATTTAAGGGGAAAAGTGCAAAAAAGATGTTGCAAAGAAG ATGGCAAGCACAGTCTCGTTCTCTTTGAGGACTTGTATCAAACAGTTTTCGGTCCTTTCGAAGCGAACGCCGTTCGATTTTCCGATCAGAACCAGATTTAAGCGATTCATCGTCACCTGCAATACTCCGAGACATCTCCATTTTGAAACCCTAACTTCCCGCCAAAAAGACCAGGTTCATCTCTTCGTCGACGCTCTTCTCGAATGGAACAAGAAAATGAATCTTACGGCCGTTACGGAAGAAAGCGAAGTGATGGAAAGGCACGTTGAGGATTCTCTCGCGATTATACCTCCAATTCGGAATCTGTACTCGTCGCATTGTTCGACGATTCCATGCGACGGCATTAAACTTCTTGATGTTGGAACGGGGGCCGGACTTCCTGGATTGATTATAGCTATTGCTTGCCCAGAATGGCAAGTAACGTTGATGGAATCTATGAATAAGCGGTGCCTTTTCTTGGAGCATGCGGTCGGTCATACCGGTTTGACAAATGTTCATGTTGTGCGAGGAAGAGCAGAGAATCTGGGACACGATCTTTTCTTACGAGAGAAATTTGATGTAGTAGTGGCTAGAGCTGTTGCAGAAATGAGAATTTTAGCTGAATACTGTCTTCCTATGGTTCGTGTTGGGGGTTTGTTTTTAGCTGCCAAGGGCCATGACCCTCTTGAAGAAGTCACAAATGCAGAAAAGGCAATTGAAATGATGGGTGCTTCGTTACTGCAAATATGCCCTGTGGAATCACATAGTCCATATGGGCAGCGAAATGCCGTTGTTTGTTTAAAAGAACGGCACACTCCCAGGAAGTATCCTCGTGATCCAGGTATTAAGACATTTACTCGACGTAGAGGCCAGGTTAGAGGCCAGGGGTAG MASTVSFSLRTCIKQFSVLSKRTPFDFPIRTRFKRFIVTCNTPRHLHFETLTSRQKDQVHLFVDALLEWNKKMNLTAVTEESEVMERHVEDSLAIIPPIRNLYSSHCSTIPCDGIKLLDVGTGAGLPGLIIAIACPEWQVTLMESMNKRCLFLEHAVGHTGLTNVHVVRGRAENLGHDLFLREKFDVVVARAVAEMRILAEYCLPMVRVGGLFLAAKGHDPLEEVTNAEKAIEMMGASLLQICPVESHSPYGQRNAVVCLKERHTPRKYPRDPGIKTFTRRRGQVRGQG Homology
BLAST of CmaCh13G009060 vs. ExPASy Swiss-Prot
Match: C0ZA63 (Ribosomal RNA small subunit methyltransferase G OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) OX=358681 GN=rsmG PE=3 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 1.6e-43 Identity = 92/227 (40.53%), Postives = 137/227 (60.35%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy Swiss-Prot
Match: A3DHY6 (Ribosomal RNA small subunit methyltransferase G OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=rsmG PE=3 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 1.8e-42 Identity = 95/226 (42.04%), Postives = 137/226 (60.62%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy Swiss-Prot
Match: A8MKR7 (Ribosomal RNA small subunit methyltransferase G OS=Alkaliphilus oremlandii (strain OhILAs) OX=350688 GN=rsmG PE=3 SV=1) HSP 1 Score: 173.7 bits (439), Expect = 3.0e-42 Identity = 95/224 (42.41%), Postives = 136/224 (60.71%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy Swiss-Prot
Match: A4J9R9 (Ribosomal RNA small subunit methyltransferase G OS=Desulfotomaculum reducens (strain MI-1) OX=349161 GN=rsmG PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 8.7e-42 Identity = 96/225 (42.67%), Postives = 132/225 (58.67%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy Swiss-Prot
Match: Q1WRS8 (Ribosomal RNA small subunit methyltransferase G OS=Lactobacillus salivarius (strain UCC118) OX=362948 GN=rsmG PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.5e-41 Identity = 91/225 (40.44%), Postives = 135/225 (60.00%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy TrEMBL
Match: A0A6J1KNI1 (uncharacterized protein LOC111495105 OS=Cucurbita maxima OX=3661 GN=LOC111495105 PE=3 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.1e-155 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy TrEMBL
Match: A0A6J1E6K7 (uncharacterized protein LOC111431267 OS=Cucurbita moschata OX=3662 GN=LOC111431267 PE=3 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 8.8e-154 Identity = 270/274 (98.54%), Postives = 272/274 (99.27%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy TrEMBL
Match: A0A0A0LW74 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045840 PE=3 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.6e-139 Identity = 250/274 (91.24%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy TrEMBL
Match: A0A5A7UNI8 (Ribosomal RNA small subunit methyltransferase G isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold80G00460 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.8e-138 Identity = 248/274 (90.51%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of CmaCh13G009060 vs. ExPASy TrEMBL
Match: A0A1S3AV93 (ribosomal RNA small subunit methyltransferase G isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483237 PE=3 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 8.8e-138 Identity = 247/277 (89.17%), Postives = 259/277 (93.50%), Query Frame = 0
BLAST of CmaCh13G009060 vs. NCBI nr
Match: XP_023000748.1 (uncharacterized protein LOC111495105 [Cucurbita maxima]) HSP 1 Score: 558.1 bits (1437), Expect = 4.3e-155 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
BLAST of CmaCh13G009060 vs. NCBI nr
Match: XP_022923607.1 (uncharacterized protein LOC111431267 [Cucurbita moschata] >KAG7019834.1 rsmG, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153 Identity = 270/274 (98.54%), Postives = 272/274 (99.27%), Query Frame = 0
BLAST of CmaCh13G009060 vs. NCBI nr
Match: KAG6584238.1 (hypothetical protein SDJN03_20170, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 550.8 bits (1418), Expect = 6.9e-153 Identity = 272/282 (96.45%), Postives = 274/282 (97.16%), Query Frame = 0
BLAST of CmaCh13G009060 vs. NCBI nr
Match: XP_023519008.1 (uncharacterized protein LOC111782483 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 540.0 bits (1390), Expect = 1.2e-149 Identity = 265/274 (96.72%), Postives = 267/274 (97.45%), Query Frame = 0
BLAST of CmaCh13G009060 vs. NCBI nr
Match: XP_031738668.1 (uncharacterized protein LOC101219448 [Cucumis sativus] >KGN64286.1 hypothetical protein Csa_013533 [Cucumis sativus]) HSP 1 Score: 505.4 bits (1300), Expect = 3.3e-139 Identity = 250/274 (91.24%), Postives = 256/274 (93.43%), Query Frame = 0
BLAST of CmaCh13G009060 vs. TAIR 10
Match: AT5G50110.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein ) HSP 1 Score: 336.7 bits (862), Expect = 1.9e-92 Identity = 155/227 (68.28%), Postives = 192/227 (84.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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