CmaCh13G006640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G006640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr13: 6196891 .. 6197160 (-)
RNA-Seq Expression	CmaCh13G006640
Synteny	CmaCh13G006640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCTCACCAAATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

mRNA sequence

ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCTCACCAAATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

Coding sequence (CDS)

ATGAAACTGGAGGGCGGTAGAAGGTTGGAGCGGATGAATGCGTACGGTAAAAAGCAATGCTTGAATTTGTTCTGGAGGGTGAGGGCGGCTTTAAAGAAGGCTATCAAGAATGGAAGCAACCGACAACTCAAACTCAAGTTTCAGTATGATCCCAGTAGCTATGCTCTTAATTTTGACGATGGCCTCACCAAATATGAACTTCAGCACTGTGCCAATGTTTACAATTCCGCCATGCGGGCTTATGTTCTTTGGGGGAAATCTGAGTCATGA

Protein sequence

MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGLTKYELQHCANVYNSAMRAYVLWGKSES

Homology

[Close]

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 3.9e-28
Identity = 68/98 (69.39%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MK+EG R LERMNAYGKKQC +LFW+V+AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 60

Query: 61 GLT----------KYELQHCANVYNSAMRAYVLWGKSE 89
          G +          K+E+Q+C NVYNSAM  YVLW KSE
Sbjct: 61 GHSEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 4.3e-27
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1   MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
           MK+EG R LERMNAYGKKQC +LFW+++AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 83

Query: 61  GLT----------KYELQHCANVYNSAMRAYVLWGKSE 89
           G +          K+E+Q+C NVYNSA   YVLW KSE
Sbjct: 84  GHSKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL
Match: I1MED1 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDG------ 67
          RLE +NAYGKK+C +LFWRVRAALKKA+KNG  +  +LKFQYDPSSYALNFDDG      
Sbjct: 6  RLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 -LTKYELQHCANVYNSAMRAYVLWGKS 88
           +    L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWVKT 89

[Close]

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL
Match: A0A445GQG1 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040194 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 5.9e-16
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 8  RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDG------ 67
          RLE +NAYGKK+C +LFWRVRAALKKA+KNG  +  +LKFQYDPSSYALNFDDG      
Sbjct: 6  RLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 65

Query: 68 -LTKYELQHCANVYNSAMRAYVLWGKS 88
           +    L    +++N+ +  YVLW K+
Sbjct: 66 FIGDARLMELTDIHNNTL-VYVLWVKT 89

[Close]

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL
Match: A0A151T7K4 (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_017585 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 1.3e-15
Identity = 48/90 (53.33%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 9  LERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDGLTK---- 68
          +E +NAYGKK+C +LFWRVRAALKKA+ NG N + +L FQYDPSSYALNFDDG       
Sbjct: 4  VEWVNAYGKKRCRSLFWRVRAALKKALNNGGNHRQRLNFQYDPSSYALNFDDGCCHASKK 63

Query: 69 -------YELQHCANVYNSAMRAYVLWGKS 88
                  EL    N  N+    YVLW K+
Sbjct: 64 FIGDARLLELTDIINNNNTTTFVYVLWLKT 93

[Close]

BLAST of CmaCh13G006640 vs. NCBI nr
Match: KAG6584014.1 (hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180.3 bits (456), Expect = 7.5e-42
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MKLEGGRRLER NAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD
Sbjct: 1  MKLEGGRRLERTNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60

Query: 61 GLTKYELQHCANVYNSAMRAYVLWGKSES 90
          G T+YELQHCANVYNSAMRAYVLWGKSES
Sbjct: 61 GRTRYELQHCANVYNSAMRAYVLWGKSES 89

[Close]

BLAST of CmaCh13G006640 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 8.1e-28
Identity = 68/98 (69.39%), Postives = 77/98 (78.57%), Query Frame = 0


Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MK+EG R LERMNAYGKKQC +LFW+V+AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 1  MKMEGSRSLERMNAYGKKQCRSLFWKVKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 60

Query: 61 GLT----------KYELQHCANVYNSAMRAYVLWGKSE 89
          G +          K+E+Q+C NVYNSAM  YVLW KSE
Sbjct: 61 GHSEIREDNVDAYKFEVQYCGNVYNSAMWVYVLWVKSE 96

[Close]

BLAST of CmaCh13G006640 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 130.2 bits (326), Expect = 9.0e-27
Identity = 66/98 (67.35%), Postives = 76/98 (77.55%), Query Frame = 0


Query: 1   MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
           MK+EG R LERMNAYGKKQC +LFW+++AALKKAIKNG+ RQ  LKFQYDPSSYALNFDD
Sbjct: 24  MKMEGSRSLERMNAYGKKQCRSLFWKMKAALKKAIKNGNKRQ--LKFQYDPSSYALNFDD 83

Query: 61  GLT----------KYELQHCANVYNSAMRAYVLWGKSE 89
           G +          K+E+Q+C NVYNSA   YVLW KSE
Sbjct: 84  GHSKIREDNVEAYKFEVQYCGNVYNSATWVYVLWVKSE 119

[Close]

BLAST of CmaCh13G006640 vs. NCBI nr
Match: KAG6573243.1 (hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.1 bits (248), Expect = 9.9e-18
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          MKL+G   L RMNAYGK+QC++LFWRVRAALKKAIKNGS R   L+FQYDPSSYALNFDD
Sbjct: 1  MKLKGSIGLARMNAYGKRQCMSLFWRVRAALKKAIKNGSKR--PLRFQYDPSSYALNFDD 60

Query: 61 GLTK 65
          G TK
Sbjct: 61 GHTK 62

[Close]

BLAST of CmaCh13G006640 vs. NCBI nr
Match: KAG4955890.1 (hypothetical protein JHK85_042270 [Glycine max])

HSP 1 Score: 93.2 bits (230), Expect = 1.2e-15
Identity = 49/87 (56.32%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 8   RLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDDG------ 67
           RLE +NAYGKK+C +LFWRVRAALKKA+KNG  +  +LKFQYDPSSYALNFDDG      
Sbjct: 44  RLEWVNAYGKKRCRSLFWRVRAALKKALKNGGKQ--RLKFQYDPSSYALNFDDGCCAAKK 103

Query: 68  -LTKYELQHCANVYNSAMRAYVLWGKS 88
            +    L    +++N+ +  YVLW K+
Sbjct: 104 FIGDARLMELTDIHNNTL-VYVLWVKT 127

[Close]

BLAST of CmaCh13G006640 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 1.2e-05
Identity = 29/62 (46.77%), Postives = 40/62 (64.52%), Query Frame = 0


Query: 1  MKLEGGRRLERMNAYGKKQCLNLFWRVRAALKKAIKNGSNRQLKLKFQYDPSSYALNFDD 60
          M+LE   R E +N Y KK    +F R++AA+KK     + ++ +  FQYDP SYALNFDD
Sbjct: 1  MRLED--RFEAVNQYRKK----MFRRMKAAVKK-----TKKKKQTMFQYDPWSYALNFDD 51

Query: 61 GL 63
          G+
Sbjct: 61 GV 51

The following BLAST results are available for this feature:

BLAST of CmaCh13G006640 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G006640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXB8	3.9e-28	69.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1	[more]
A0A5D3DSE1	4.3e-27	67.35	Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis ...	[more]
I1MED1	5.9e-16	56.32	Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_15G069900 PE=4 SV=1	[more]
A0A445GQG1	5.9e-16	56.32	Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_040194 PE=4 SV=1	[more]
A0A151T7K4	1.3e-15	53.33	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_017585 PE=4 SV=1	[more]

BLAST of CmaCh13G006640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6584014.1	7.5e-42	96.63	hypothetical protein SDJN03_19946, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KGN64641.1	8.1e-28	69.39	hypothetical protein Csa_013386 [Cucumis sativus]	[more]
KAA0056955.1	9.0e-27	67.35	putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis me...	[more]
KAG6573243.1	9.9e-18	78.13	hypothetical protein SDJN03_27130, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG4955890.1	1.2e-15	56.32	hypothetical protein JHK85_042270 [Glycine max]	[more]

BLAST of CmaCh13G006640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11112.1	1.2e-05	46.77	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34538	EXPRESSED PROTEIN	coord: 7..71
None	No IPR available	PANTHER	PTHR34538:SF10	OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATED	coord: 7..71

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G006640.1	CmaCh13G006640.1	mRNA