CmaCh13G006590 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G006590
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	TIR domain-containing protein
Location	Cma_Chr13: 6180160 .. 6180814 (+)
RNA-Seq Expression	CmaCh13G006590
Synteny	CmaCh13G006590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACGTTATTTTTCAGCTCTCCCCAGAAACCACCTAATCCCCTCCACAATCCTCACTCGTTGCAACCACATCCGATCGATGTCGCAGCGGTGCGATGTTTTCATAAATTACCGTGGCGTCGACACCCGAGGGAGCATCGCTGGCTTGCTCTATGACCATTTTGCTAGAATAGGGCTCCGCCCATTCTTAGACAGCGCCAACATGAAACCAGGAGACAAGCTTTTTGGGGAGATTGAGGAAAGTATTAGGAGTTGTAAGGTGGGAATTGCGGTGTTTTCGCCGCGTTATTGTCGGTCTTATTTTTGTTTGCATGAACTTGCTCTAATGGTGGAGAACAAAAAGAAGATCATACCGATATTCGTCGACGTTCGGCCGTCTGAACTTCATGTCGAATTGAACCGAAACTGTCCCGAAAAAGAGATGGAGAGGTTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCAGTAACGGGTAATTATTTCTCCATAAAATCGTCGCGTAATTTGTACCCAAAAGCACTCATGTTGTGTGATTATCTTGTTAGGGATTGGTCGGAGCTGCTCAGAAAAGCTTCAACCGCCGTCATTGATAATCTGGTCGCCGGAGAAGCCGTAGAGATGCCGGGAAATTAA

mRNA sequence

ATGCAACGTTATTTTTCAGCTCTCCCCAGAAACCACCTAATCCCCTCCACAATCCTCACTCGTTGCAACCACATCCGATCGATGTCGCAGCGGTGCGATGTTTTCATAAATTACCGTGGCGTCGACACCCGAGGGAGCATCGCTGGCTTGCTCTATGACCATTTTGCTAGAATAGGGCTCCGCCCATTCTTAGACAGCGCCAACATGAAACCAGGAGACAAGCTTTTTGGGGAGATTGAGGAAAGTATTAGGAGTTGTAAGGTGGGAATTGCGGTGTTTTCGCCGCGTTATTGTCGGTCTTATTTTTGTTTGCATGAACTTGCTCTAATGGTGGAGAACAAAAAGAAGATCATACCGATATTCGTCGACGTTCGGCCGTCTGAACTTCATGTCGAATTGAACCGAAACTGTCCCGAAAAAGAGATGGAGAGGTTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCAGTAACGGGGATTGGTCGGAGCTGCTCAGAAAAGCTTCAACCGCCGTCATTGATAATCTGGTCGCCGGAGAAGCCGTAGAGATGCCGGGAAATTAA

Coding sequence (CDS)

ATGCAACGTTATTTTTCAGCTCTCCCCAGAAACCACCTAATCCCCTCCACAATCCTCACTCGTTGCAACCACATCCGATCGATGTCGCAGCGGTGCGATGTTTTCATAAATTACCGTGGCGTCGACACCCGAGGGAGCATCGCTGGCTTGCTCTATGACCATTTTGCTAGAATAGGGCTCCGCCCATTCTTAGACAGCGCCAACATGAAACCAGGAGACAAGCTTTTTGGGGAGATTGAGGAAAGTATTAGGAGTTGTAAGGTGGGAATTGCGGTGTTTTCGCCGCGTTATTGTCGGTCTTATTTTTGTTTGCATGAACTTGCTCTAATGGTGGAGAACAAAAAGAAGATCATACCGATATTCGTCGACGTTCGGCCGTCTGAACTTCATGTCGAATTGAACCGAAACTGTCCCGAAAAAGAGATGGAGAGGTTCAATTGGGCACTTGGAGAAGCCAAATACACCGTTGGACTCACTTTCGACTCCAGTAACGGGGATTGGTCGGAGCTGCTCAGAAAAGCTTCAACCGCCGTCATTGATAATCTGGTCGCCGGAGAAGCCGTAGAGATGCCGGGAAATTAA

Protein sequence

MQRYFSALPRNHLIPSTILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN

Homology

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BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot
Match: I1GTC2 (TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 81/163 (49.69%), Postives = 117/163 (71.78%), Query Frame = 0


Query: 31  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 90
           R +VFIN+RGVDT+ ++A LLYD  A+ GLR FLD+ +M+PGD+L   I  +IR C V +
Sbjct: 52  RYEVFINHRGVDTKRTVARLLYDRLAQAGLRGFLDNMSMRPGDRLEERIGSAIRECTVAV 111

Query: 91  AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSEL----HVELNRNCPEKEMERFN 150
           A+FSP YC S +CL ELA++VE++K IIPIF D++PS+L     V  +     +++ERF 
Sbjct: 112 AIFSPSYCDSEYCLRELAMLVESRKAIIPIFYDIKPSDLLLPQAVADSEVYLPRDLERFK 171

Query: 151 WALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVE 190
           +AL EAK+TVG+T+DS+ GD +EL+  A+ AV+ N+   E V+
Sbjct: 172 FALREAKHTVGITYDSATGDMAELVSAAADAVMYNMEKMETVQ 214

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BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot
Match: A0A290U7C4 (Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.7e-12
Identity = 34/99 (34.34%), Postives = 56/99 (56.57%), Query Frame = 0


Query: 33  DVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAV 92
           DVF+++RG DTR +  G L++     G+  F+D   +K G  +  E+ ++I   +  + V
Sbjct: 13  DVFLSFRGEDTRKTFVGHLFNALIEKGIHTFMDDKELKRGKSISSELMKAIGESRFAVVV 72

Query: 93  FSPRYCRSYFCLHELALMVENKKK----IIPIFVDVRPS 128
           FS  Y  S +CL EL  ++E  +K    ++P+F DV PS
Sbjct: 73  FSKNYASSTWCLEELVKILEIHEKFELIVVPVFYDVDPS 111

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BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot
Match: Q40392 (TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.8e-11
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 33  DVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAV 92
           DVF+++RG DTR +    LY+     G++ F D   ++ G  + GE+ ++I   +  I V
Sbjct: 13  DVFLSFRGEDTRKTFTSHLYEVLNDKGIKTFQDDKRLEYGATIPGELCKAIEESQFAIVV 72

Query: 93  FSPRYCRSYFCLHELALMVENKKK----IIPIFVDVRPSEL 130
           FS  Y  S +CL+EL  ++E K +    +IPIF DV PS +
Sbjct: 73  FSENYATSRWCLNELVKIMECKTRFKQTVIPIFYDVDPSHV 113

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BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot
Match: Q9SSN3 (Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR PE=1 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-11
Identity = 44/161 (27.33%), Postives = 75/161 (46.58%), Query Frame = 0


Query: 33  DVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAV 92
           DVF+++RG DTR +    LY    R  +R F D   ++ G +   E++  I   +  + V
Sbjct: 10  DVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVVV 69

Query: 93  FSPRYCRSYFCLHELALMVENKKK----IIPIFVDVRPSELHVE-----------LNRNC 152
            S  Y  S +CL EL  +++ +KK    ++PIF  V P+ +  +            +R  
Sbjct: 70  VSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASRED 129

Query: 153 PEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAV 179
           PEK ++   W      +   L+ D S  D S+L+ K +  +
Sbjct: 130 PEKVLK---WRQALTNF-AQLSGDCSGDDDSKLVDKIANEI 166

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BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot
Match: F4KIF3 (Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.0e-10
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = 0


Query: 34  VFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAVF 93
           VFIN+RGV+ R +    L     R G+  F+D+ + + G +L   + E I   ++ +A+F
Sbjct: 19  VFINFRGVELRKNFVSHLEKGLKRKGINAFIDT-DEEMGQEL-SVLLERIEGSRIALAIF 78

Query: 94  SPRYCRSYFCLHELALMVENKKK----IIPIFVDVRP----------SELHVELNRNCPE 153
           SPRY  S +CL ELA M E  ++    +IPIF  V+P           +   EL ++  +
Sbjct: 79  SPRYTESKWCLKELAKMKERTEQKELVVIPIFYKVQPVTVKELKGDFGDKFRELVKSTDK 138

Query: 154 KEMERFNWALGEAKYTVGLTFDSSNGD 167
           K  + +  AL    +  G+  D  + +
Sbjct: 139 KTKKEWKEALQYVPFLTGIVLDEKSDE 163

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BLAST of CmaCh13G006590 vs. ExPASy TrEMBL
Match: A0A6J1KH70 (toll/interleukin-1 receptor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111495714 PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 6.0e-90
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 31  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 90
           RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI
Sbjct: 17  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 76

Query: 91  AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG 150
           AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG
Sbjct: 77  AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG 136

Query: 151 EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 194
           EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN
Sbjct: 137 EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 179

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BLAST of CmaCh13G006590 vs. ExPASy TrEMBL
Match: A0A6J1EH47 (toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111434063 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 3.9e-89
Identity = 162/166 (97.59%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 28  MSQRCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCK 87
           MSQRCDVFINYRGVDTR SIAGLLYDHF RIGLRPFLDSANMKPGDKLFGEIEESIRSCK
Sbjct: 1   MSQRCDVFINYRGVDTRRSIAGLLYDHFTRIGLRPFLDSANMKPGDKLFGEIEESIRSCK 60

Query: 88  VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNW 147
           VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVE NRNCPEKEMERFNW
Sbjct: 61  VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVEFNRNCPEKEMERFNW 120

Query: 148 ALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 194
           ALGEAKYTVGLTFDS NGDWSELLRKASTAVIDNLVAGEAVEMPGN
Sbjct: 121 ALGEAKYTVGLTFDSINGDWSELLRKASTAVIDNLVAGEAVEMPGN 166

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BLAST of CmaCh13G006590 vs. ExPASy TrEMBL
Match: A0A5D3DRR9 (Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00490 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.1e-83
Identity = 153/195 (78.46%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   MQRYFSALPRNHLIPST-ILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIG 60
           MQRYFS + +N+L  S+ IL+R N IRS+S++CDVFIN+RGVDT+ +IAGLL+DHF+RIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LRPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIP 120
           LRPFLDS +MKPGDKLFGEIEE IRSCKVG+AVFSPRYC SYFCLHELALMVENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVI 180
           IFVDVRPS+L VE N +CP+KE++RFNWALGEAKYTVGLTFD+ NGDWSELLRKAS AVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLVAGE-AVEMPGN 194
           DNL+ GE A EMP N
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of CmaCh13G006590 vs. ExPASy TrEMBL
Match: A0A1S3BG53 (disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.1e-83
Identity = 153/195 (78.46%), Postives = 175/195 (89.74%), Query Frame = 0


Query: 1   MQRYFSALPRNHLIPST-ILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIG 60
           MQRYFS + +N+L  S+ IL+R N IRS+S++CDVFIN+RGVDT+ +IAGLL+DHF+RIG
Sbjct: 1   MQRYFSTVAKNYLTSSSKILSRRNDIRSLSRQCDVFINHRGVDTKRNIAGLLHDHFSRIG 60

Query: 61  LRPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIP 120
           LRPFLDS +MKPGDKLFGEIEE IRSCKVG+AVFSPRYC SYFCLHELALMVENKKKIIP
Sbjct: 61  LRPFLDSKSMKPGDKLFGEIEEGIRSCKVGLAVFSPRYCESYFCLHELALMVENKKKIIP 120

Query: 121 IFVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVI 180
           IFVDVRPS+L VE N +CP+KE++RFNWALGEAKYTVGLTFD+ NGDWSELLRKAS AVI
Sbjct: 121 IFVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVI 180

Query: 181 DNLVAGE-AVEMPGN 194
           DNL+ GE A EMP N
Sbjct: 181 DNLIVGEGAGEMPDN 195

[Close]

BLAST of CmaCh13G006590 vs. ExPASy TrEMBL
Match: A0A0A0LV24 (TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.7e-81
Identity = 149/194 (76.80%), Postives = 171/194 (88.14%), Query Frame = 0


Query: 1   MQRYFSALPRNHLIPSTILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIGL 60
           MQRYFS + +++L  S IL+R N+IRS+S++CDVFIN+RG DT+ +IAGLL+DHF+RIGL
Sbjct: 1   MQRYFSTVAKSYLTSSKILSRRNNIRSISRQCDVFINHRGADTKRNIAGLLHDHFSRIGL 60

Query: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIPI 120
             FLDS +MKPGDKLFGEIEE IRSCKVGIAVFSPRYC SYFCLHELALM+ENKKKIIPI
Sbjct: 61  HSFLDSKSMKPGDKLFGEIEEGIRSCKVGIAVFSPRYCESYFCLHELALMMENKKKIIPI 120

Query: 121 FVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVID 180
           FVDVRPS+L VE N +CP+KE++RFNWALGEAKYTVGLTFD+ NGDWSELLRKAS AVID
Sbjct: 121 FVDVRPSQLRVEYNYSCPKKELQRFNWALGEAKYTVGLTFDTVNGDWSELLRKASNAVID 180

Query: 181 NL-VAGEAVEMPGN 194
           NL V G A EMP N
Sbjct: 181 NLIVGGGAGEMPDN 194

[Close]

BLAST of CmaCh13G006590 vs. NCBI nr
Match: KAG7019631.1 (TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381.7 bits (979), Expect = 3.7e-102
Identity = 183/193 (94.82%), Postives = 187/193 (96.89%), Query Frame = 0


Query: 1   MQRYFSALPRNHLIPSTILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIGL 60
           MQRYFS+LPRNHL+PSTILTR NH+RSMSQRCDVFINYRGVDTR SIAGLLYDHF RIGL
Sbjct: 1   MQRYFSSLPRNHLVPSTILTRRNHVRSMSQRCDVFINYRGVDTRPSIAGLLYDHFTRIGL 60

Query: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIPI 120
           RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYC+SYFCLHELALMVENKKKIIPI
Sbjct: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCQSYFCLHELALMVENKKKIIPI 120

Query: 121 FVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVID 180
           FVDVRPSEL VE NRNCPEKEMERFNWALGEAKYTVGLTFDS NGDWSELLRKASTAVID
Sbjct: 121 FVDVRPSELRVEFNRNCPEKEMERFNWALGEAKYTVGLTFDSINGDWSELLRKASTAVID 180

Query: 181 NLVAGEAVEMPGN 194
           NLVAGEAVEMPGN
Sbjct: 181 NLVAGEAVEMPGN 193

[Close]

BLAST of CmaCh13G006590 vs. NCBI nr
Match: KAG6584009.1 (TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 378.6 bits (971), Expect = 3.1e-101
Identity = 181/193 (93.78%), Postives = 186/193 (96.37%), Query Frame = 0


Query: 1   MQRYFSALPRNHLIPSTILTRCNHIRSMSQRCDVFINYRGVDTRGSIAGLLYDHFARIGL 60
           MQRYFS+LPRNHL+PSTILTR NH+ SMSQRCDVFINYRGVDTR SIAGLLYDHF RIGL
Sbjct: 1   MQRYFSSLPRNHLVPSTILTRRNHVGSMSQRCDVFINYRGVDTRPSIAGLLYDHFTRIGL 60

Query: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCRSYFCLHELALMVENKKKIIPI 120
           RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYC+SYFCLHELALMVENKKKIIPI
Sbjct: 61  RPFLDSANMKPGDKLFGEIEESIRSCKVGIAVFSPRYCQSYFCLHELALMVENKKKIIPI 120

Query: 121 FVDVRPSELHVELNRNCPEKEMERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVID 180
           FVDVRPSEL VE NRNCPEKEMERFNWALGEAKYTVGLTFDS NGDWSELLRKASTAV+D
Sbjct: 121 FVDVRPSELRVEFNRNCPEKEMERFNWALGEAKYTVGLTFDSINGDWSELLRKASTAVVD 180

Query: 181 NLVAGEAVEMPGN 194
           NLVAGEAVEMPGN
Sbjct: 181 NLVAGEAVEMPGN 193

[Close]

BLAST of CmaCh13G006590 vs. NCBI nr
Match: XP_023001642.1 (toll/interleukin-1 receptor-like protein, partial [Cucurbita maxima])

HSP 1 Score: 340.1 bits (871), Expect = 1.2e-89
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 31  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 90
           RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI
Sbjct: 17  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 76

Query: 91  AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG 150
           AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG
Sbjct: 77  AVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALG 136

Query: 151 EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 194
           EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN
Sbjct: 137 EAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 179

[Close]

BLAST of CmaCh13G006590 vs. NCBI nr
Match: XP_022927124.1 (toll/interleukin-1 receptor-like protein [Cucurbita moschata])

HSP 1 Score: 337.4 bits (864), Expect = 8.0e-89
Identity = 162/166 (97.59%), Postives = 162/166 (97.59%), Query Frame = 0


Query: 28  MSQRCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCK 87
           MSQRCDVFINYRGVDTR SIAGLLYDHF RIGLRPFLDSANMKPGDKLFGEIEESIRSCK
Sbjct: 1   MSQRCDVFINYRGVDTRRSIAGLLYDHFTRIGLRPFLDSANMKPGDKLFGEIEESIRSCK 60

Query: 88  VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNW 147
           VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVE NRNCPEKEMERFNW
Sbjct: 61  VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVEFNRNCPEKEMERFNW 120

Query: 148 ALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 194
           ALGEAKYTVGLTFDS NGDWSELLRKASTAVIDNLVAGEAVEMPGN
Sbjct: 121 ALGEAKYTVGLTFDSINGDWSELLRKASTAVIDNLVAGEAVEMPGN 166

[Close]

BLAST of CmaCh13G006590 vs. NCBI nr
Match: XP_023520219.1 (TMV resistance protein N-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 332.8 bits (852), Expect = 2.0e-87
Identity = 160/166 (96.39%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 28  MSQRCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCK 87
           MSQRCDVFINYRGVDTR SIAGLLYDHF RIGLRPFLDSANMKPGDKLFGEIEESIRSCK
Sbjct: 1   MSQRCDVFINYRGVDTRRSIAGLLYDHFTRIGLRPFLDSANMKPGDKLFGEIEESIRSCK 60

Query: 88  VGIAVFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNW 147
           VGIAVFSPRYC+SYFCLHELALMVENKKKIIPIFVDVRPSEL VE NRNCPEKEMERFNW
Sbjct: 61  VGIAVFSPRYCQSYFCLHELALMVENKKKIIPIFVDVRPSELRVEFNRNCPEKEMERFNW 120

Query: 148 ALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEAVEMPGN 194
           ALGEAKYTVGLTFDS NGDWSELLRKASTAVIDNLVAGEAVEMPGN
Sbjct: 121 ALGEAKYTVGLTFDSINGDWSELLRKASTAVIDNLVAGEAVEMPGN 166

[Close]

BLAST of CmaCh13G006590 vs. TAIR 10
Match: AT1G61105.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 209.9 bits (533), Expect = 1.8e-54
Identity = 100/155 (64.52%), Postives = 124/155 (80.00%), Query Frame = 0


Query: 32  CDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIA 91
           CD+FIN+RG+DT+ +I+GLLYD F R  L  FLDS ++KPGD+LF EI+ +I++C VGIA
Sbjct: 29  CDIFINHRGIDTKKTISGLLYDCFTRQRLTAFLDSKSLKPGDRLFVEIDMAIKACGVGIA 88

Query: 92  VFSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNRNCPEKEMERFNWALGE 151
           VFSPRYC SYFCLHELAL+V+NKK++IPIF DV+PSEL V+ ++  P  E+ RF  AL E
Sbjct: 89  VFSPRYCDSYFCLHELALLVKNKKRVIPIFCDVKPSELCVKDDKTRPAAEIRRFQLALEE 148

Query: 152 AKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGE 187
           AKYTVGLTFD+SNGDWSE L  AS AV  NL+  E
Sbjct: 149 AKYTVGLTFDTSNGDWSEFLAMASDAVTKNLLEVE 183

[Close]

BLAST of CmaCh13G006590 vs. TAIR 10
Match: AT1G52900.1 (Toll-Interleukin-Resistance (TIR) domain family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.2e-47
Identity = 89/156 (57.05%), Postives = 115/156 (73.72%), Query Frame = 0


Query: 33  DVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAV 92
           DVFIN+RG DT+ +IA LLYD+     LRPFLDS NMKPGDKLF  I  +I + KV + V
Sbjct: 39  DVFINHRGSDTKRNIATLLYDNLKSRNLRPFLDSKNMKPGDKLFDHINNAILTSKVAVTV 98

Query: 93  FSPRYCRSYFCLHELALMVENKKKIIPIFVDVRPSELHVELNR-NCPEKEMERFNWALGE 152
           FSP YC SYFCLHELAL++E++K++IPIF D++PS+L V + R  C + E++RF WAL E
Sbjct: 99  FSPNYCDSYFCLHELALIMESRKRVIPIFCDIKPSQLDVMIERVTCSDDEIQRFRWALQE 158

Query: 153 AKYTVGLTFDSSNGDWSELLRKASTAVIDNLVAGEA 188
           AK  VGLTFDS  G+ SE++  AS  +++ LV  EA
Sbjct: 159 AKDIVGLTFDSYKGNLSEVVTVASDVIVERLVELEA 194

[Close]

BLAST of CmaCh13G006590 vs. TAIR 10
Match: AT5G17680.1 (disease resistance protein (TIR-NBS-LRR class), putative )

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-15
Identity = 48/162 (29.63%), Postives = 88/162 (54.32%), Query Frame = 0


Query: 31  RCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGI 90
           + DVF+++RG D R +    L+  F R+G++ F D  +++ G  +  E+ ++I+  +  I
Sbjct: 17  KTDVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAI 76

Query: 91  AVFSPRYCRSYFCLHELALMVE-NKKKIIPIFVDVRPSELH-------VELNRNCPEKEM 150
            V S  Y  S +CL EL  ++E NK  I+PIF +V PS++         ++  +  ++++
Sbjct: 77  VVVSRNYAASSWCLDELLKIMECNKDTIVPIFYEVDPSDVRRQRGSFGEDVESHSDKEKV 136

Query: 151 ERFNWALGEAKYTVGLTFDSSNGDWSELLRKASTAVIDNLVA 185
            ++  AL +     G   DS N D S+L++K    + D LV+
Sbjct: 137 GKWKEALKKLAAISG--EDSRNWDDSKLIKKIVKDISDKLVS 176

[Close]

BLAST of CmaCh13G006590 vs. TAIR 10
Match: AT1G17615.1 (Disease resistance protein (TIR-NBS class) )

HSP 1 Score: 75.9 bits (185), Expect = 4.0e-14
Identity = 32/110 (29.09%), Postives = 64/110 (58.18%), Query Frame = 0


Query: 30  QRCDVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVG 89
           Q+ DVF+++RG DTR +    LY     +G+R F D   ++ G ++  ++  +I + K+ 
Sbjct: 13  QKFDVFLSFRGKDTRRTFISFLYKELIEMGIRTFKDDVELQSGRRIASDLLAAIENSKIA 72

Query: 90  IAVFSPRYCRSYFCLHELALMVENKKK----IIPIFVDVRPSELHVELNR 136
           + + S  Y  S +CL EL ++++ +KK    ++PIF +V P+ +  ++ +
Sbjct: 73  VVIISKNYSASPWCLQELVMIMDVEKKGSIIVMPIFYNVEPAHVRRQIEQ 122

[Close]

BLAST of CmaCh13G006590 vs. TAIR 10
Match: AT5G48770.1 (Disease resistance protein (TIR-NBS-LRR class) family )

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 36/101 (35.64%), Postives = 57/101 (56.44%), Query Frame = 0


Query: 33  DVFINYRGVDTRGSIAGLLYDHFARIGLRPFLDSANMKPGDKLFGEIEESIRSCKVGIAV 92
           DVF+++RG DTR +I   LY      G+  F D  +++ GD +   +  +I   K  + V
Sbjct: 15  DVFLSFRGEDTRRTIVSHLYAALGAKGIITFKDDQDLEVGDHISSHLRRAIEGSKFAVVV 74

Query: 93  FSPRYCRSYFCLHELALMVE----NKKKIIPIFVDVRPSEL 130
            S RY  S +CL EL L++E     K K++P+F +V PS++
Sbjct: 75  LSERYTTSRWCLMELQLIMELYNLGKLKVLPLFYEVDPSDV 115

The following BLAST results are available for this feature:

BLAST of CmaCh13G006590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
I1GTC2	7.1e-40	49.69	TIR-only protein OS=Brachypodium distachyon OX=15368 GN=BRADI_1g24377v3 PE=1 SV=...	[more]
A0A290U7C4	3.7e-12	34.34	Disease resistance protein Roq1 OS=Nicotiana benthamiana OX=4100 GN=ROQ1 PE=1 SV...	[more]
Q40392	1.8e-11	36.63	TMV resistance protein N OS=Nicotiana glutinosa OX=35889 GN=N PE=1 SV=1	[more]
Q9SSN3	5.3e-11	27.33	Toll/interleukin-1 receptor-like protein OS=Arabidopsis thaliana OX=3702 GN=TIR ...	[more]
F4KIF3	2.0e-10	29.93	Disease resistance-like protein CSA1 OS=Arabidopsis thaliana OX=3702 GN=CSA1 PE=...	[more]

BLAST of CmaCh13G006590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KH70	6.0e-90	100.00	toll/interleukin-1 receptor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1EH47	3.9e-89	97.59	toll/interleukin-1 receptor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5D3DRR9	7.1e-83	78.46	Disease resistance-like protein CSA1 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3BG53	7.1e-83	78.46	disease resistance-like protein CSA1 OS=Cucumis melo OX=3656 GN=LOC103489293 PE=...	[more]
A0A0A0LV24	8.7e-81	76.80	TIR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G073070 PE=4 SV...	[more]

BLAST of CmaCh13G006590 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7019631.1	3.7e-102	94.82	TMV resistance protein N, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6584009.1	3.1e-101	93.78	TIR-only protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023001642.1	1.2e-89	100.00	toll/interleukin-1 receptor-like protein, partial [Cucurbita maxima]	[more]
XP_022927124.1	8.0e-89	97.59	toll/interleukin-1 receptor-like protein [Cucurbita moschata]	[more]
XP_023520219.1	2.0e-87	96.39	TMV resistance protein N-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh13G006590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G61105.1	1.8e-54	64.52	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT1G52900.1	6.2e-47	57.05	Toll-Interleukin-Resistance (TIR) domain family protein	[more]
AT5G17680.1	1.3e-15	29.63	disease resistance protein (TIR-NBS-LRR class), putative	[more]
AT1G17615.1	4.0e-14	29.09	Disease resistance protein (TIR-NBS class)	[more]
AT5G48770.1	3.4e-13	35.64	Disease resistance protein (TIR-NBS-LRR class) family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	SMART	SM00255	till_3	coord: 31..164 e-value: 2.5E-20 score: 83.5
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PFAM	PF13676	TIR_2	coord: 34..126 e-value: 5.2E-17 score: 62.6
IPR000157	Toll/interleukin-1 receptor homology (TIR) domain	PROSITE	PS50104	TIR	coord: 30..156 score: 23.137253
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	GENE3D	3.40.50.10140		coord: 26..185 e-value: 1.1E-30 score: 108.5
IPR035897	Toll/interleukin-1 receptor homology (TIR) domain superfamily	SUPERFAMILY	52200	Toll/Interleukin receptor TIR domain	coord: 26..130
None	No IPR available	PANTHER	PTHR31008:SF19	TOLL-INTERLEUKIN-RESISTANCE (TIR) DOMAIN FAMILY PROTEIN	coord: 27..185
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 27..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G006590.1	CmaCh13G006590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003953	NAD+ nucleosidase activity