CmaCh13G005870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G005870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cupin type-1 domain-containing protein
Location	Cma_Chr13: 5842244 .. 5842762 (+)
RNA-Seq Expression	CmaCh13G005870
Synteny	CmaCh13G005870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAAAATGCCGCCGGCGCCACCGTCACCTCCGACGCCGGTCGTCCAAAAACCCACTGAAAACGACTTCGTTGAGCTTCCCGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGATGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGTGGCGGGTTCGGGTCAATCATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGAGGCAGAGGAGAGAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAAATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCAGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATTCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACTGTTAGATGA

mRNA sequence

ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAAAATGCCGCCGGCGCCACCGTCACCTCCGACGCCGGTCGTCCAAAAACCCACTGAAAACGACTTCGTTGAGCTTCCCGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGATGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGTGGCGGGTTCGGGTCAATCATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGAGGCAGAGGAGAGAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAAATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCAGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATTCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACTGTTAGATGA

Coding sequence (CDS)

ATGGAAGACCAGCAGGTTCTACAGAATTTGGATTCTCTCTGGTTCTTCGCCACTGTATTCTCAAACAAAATGCCGCCGGCGCCACCGTCACCTCCGACGCCGGTCGTCCAAAAACCCACTGAAAACGACTTCGTTGAGCTTCCCGGAGGAGAAATTGCGACACCCATTTTTCAAAATCAGCAAAATGTTGGGGATGAGAGGAATATTGTAGACGAGAAGACGAATGAAACCGGTGGCGGGTTCGGGTCAATCATAACAGAGGAGAGGAGAAAAAGCAGAGGAAGAAGATGGGGGTGTTTGAGGCAGAGGAGAGAGATTGTCGGAGAGATGGATCTGAGTGATGCTGTGAAGGAAATTTGTGAATGTTGGTTGCTTGAACAGAGAATTGGCGGCGGGAATCAGTACCAGAGAGGGAGGAGGAAGATGAAGAAGAAGAAGATTCCTCCGTTTGAAGATAGTATGGCCATGAAAGAGCACATCAGATCCTGGGCTTATGCAGTGGCCTGTACTGTTAGATGA

Protein sequence

MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQQNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEICECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR

Homology

[Close]

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL
Match: A0A6J1KF61 (uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 9.4e-95
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC
Sbjct: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 172

[Close]

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL
Match: A0A6J1EGY0 (uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC111434099 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 153/172 (88.95%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN+ PP       PVVQKPT++DFVE PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQYQRG RKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

[Close]

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL
Match: A0A5A7UQZ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G002450 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.0e-41
Identity = 100/175 (57.14%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           ME QQV +N DSLWFF+TVFSN+ P        PVV+KP +NDFVE  G EIATPI +N+
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTP--------PVVEKPIQNDFVEPLGEEIATPITRNE 60

Query: 61  QN-VGDERNIVDEKTNETGGGFGSIITEERRKSRGRR-WGCLRQRREIVGEMDLSDAVKE 120
           +N VG+E+ +  E+           + E+RRK+RGRR WG  ++R+ +VGE+DLS AVKE
Sbjct: 61  ENDVGEEKEMETEE-----------MEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKE 120

Query: 121 ICECWLLE-QRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ICECW  E  RIGGG          K KK+P FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ICECWSFEVMRIGGGK---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL
Match: A0A1S3B8X4 (uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 6.0e-41
Identity = 100/175 (57.14%), Postives = 121/175 (69.14%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           ME QQV +N DSLWFF+TVFSN+ P        PVV+KP +NDFVE  G EIATPI +N+
Sbjct: 1   MEGQQVFENFDSLWFFSTVFSNRTP--------PVVEKPIQNDFVEPLGEEIATPITRNE 60

Query: 61  QN-VGDERNIVDEKTNETGGGFGSIITEERRKSRGRR-WGCLRQRREIVGEMDLSDAVKE 120
           +N VG+E+ +  E+           + E+RRK+RGRR WG  ++R+ +VGE+DLS AVKE
Sbjct: 61  ENDVGEEKEMETEE-----------MEEKRRKNRGRRSWGLEQRRKFVVGEIDLSYAVKE 120

Query: 121 ICECWLLE-QRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ICECW  E  RIGGG          K KK+P FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ICECWSFEVMRIGGGK---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL
Match: A0A0A0LX63 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 3.3e-39
Identity = 100/174 (57.47%), Postives = 117/174 (67.24%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           ME QQVL+N DSLWFFATVFSN+ P        PVV KP +NDFV   G EIATPI +N+
Sbjct: 1   MEGQQVLENFDSLWFFATVFSNRTP--------PVVGKPIQNDFVGSLGEEIATPITRNE 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSR-GRRWGCLRQRREIVGEMDLSDAVKEI 120
           +N     N+ + K  ET         E+RRK+R GR WG  ++++ IVGE+DLS AVKEI
Sbjct: 61  EN-----NVCEAKEMET-----EEREEKRRKNRGGRSWGLEQRKKFIVGEIDLSYAVKEI 120

Query: 121 CECWLLEQ-RIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           CECW  E+ RIGGG          K KK+P FEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 CECWSFEEMRIGGGE---------KTKKMPSFEDSMAMKEHIRSWAYAVACTVR 147

[Close]

BLAST of CmaCh13G005870 vs. NCBI nr
Match: XP_023000977.1 (uncharacterized protein LOC111495257 [Cucurbita maxima])

HSP 1 Score: 355.9 bits (912), Expect = 1.9e-94
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC
Sbjct: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 172

[Close]

BLAST of CmaCh13G005870 vs. NCBI nr
Match: XP_023520136.1 (uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.0 bits (837), Expect = 9.6e-86
Identity = 157/172 (91.28%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN+ PP PP PP PVVQKPT+NDFVE PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPPPPPPPPPPVVQKPTQNDFVEPPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQYQRGRRKMKKKK+PPFEDSMAMKEHIRSWA+AVAC VR
Sbjct: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKMPPFEDSMAMKEHIRSWAFAVACIVR 172

[Close]

BLAST of CmaCh13G005870 vs. NCBI nr
Match: KAG6583945.1 (hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 156/172 (90.70%), Postives = 162/172 (94.19%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN+ P  PP PP PVVQKPT+NDF E PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTP--PPPPPPPVVQKPTQNDFDEPPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQY+RGRRKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 170

[Close]

BLAST of CmaCh13G005870 vs. NCBI nr
Match: KAG7019562.1 (hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 154/172 (89.53%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN+ P     PP PVVQKPT++DFVE PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTP-----PPPPVVQKPTQHDFVEPPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQY+RGRRKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYRRGRRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 167

[Close]

BLAST of CmaCh13G005870 vs. NCBI nr
Match: XP_022927166.1 (uncharacterized protein LOC111434099 [Cucurbita moschata])

HSP 1 Score: 311.6 bits (797), Expect = 4.2e-81
Identity = 153/172 (88.95%), Postives = 159/172 (92.44%), Query Frame = 0


Query: 1   MEDQQVLQNLDSLWFFATVFSNKMPPAPPSPPTPVVQKPTENDFVELPGGEIATPIFQNQ 60
           MEDQQVLQNLDSLWFFATVFSN+ PP       PVVQKPT++DFVE PGGEIATPIFQNQ
Sbjct: 1   MEDQQVLQNLDSLWFFATVFSNRTPP-------PVVQKPTQHDFVEPPGGEIATPIFQNQ 60

Query: 61  QNVGDERNIVDEKTNETGGGFGSIITEERRKSRGRRWGCLRQRREIVGEMDLSDAVKEIC 120
           QNVG+ERNIVDEKTNETGGG G IITEERRKSRGRRWGCL QRR+IVGEMDLSDAVKEIC
Sbjct: 61  QNVGEERNIVDEKTNETGGGLGLIITEERRKSRGRRWGCLGQRRKIVGEMDLSDAVKEIC 120

Query: 121 ECWLLEQRIGGGNQYQRGRRKMKKKKIPPFEDSMAMKEHIRSWAYAVACTVR 173
           ECWLLEQRIGGGNQYQRG RKMKKKK+PPFEDSMAMKEHIRSWAYAVACTVR
Sbjct: 121 ECWLLEQRIGGGNQYQRGGRKMKKKKMPPFEDSMAMKEHIRSWAYAVACTVR 165

The following BLAST results are available for this feature:

BLAST of CmaCh13G005870 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G005870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KF61	9.4e-95	100.00	uncharacterized protein LOC111495257 OS=Cucurbita maxima OX=3661 GN=LOC111495257...	[more]
A0A6J1EGY0	2.0e-81	88.95	uncharacterized protein LOC111434099 OS=Cucurbita moschata OX=3662 GN=LOC1114340...	[more]
A0A5A7UQZ2	6.0e-41	57.14	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3B8X4	6.0e-41	57.14	uncharacterized protein LOC103487056 OS=Cucumis melo OX=3656 GN=LOC103487056 PE=...	[more]
A0A0A0LX63	3.3e-39	57.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G470250 PE=4 SV=1	[more]

BLAST of CmaCh13G005870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000977.1	1.9e-94	100.00	uncharacterized protein LOC111495257 [Cucurbita maxima]	[more]
XP_023520136.1	9.6e-86	91.28	uncharacterized protein LOC111783440 [Cucurbita pepo subsp. pepo]	[more]
KAG6583945.1	1.5e-83	90.70	hypothetical protein SDJN03_19877, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7019562.1	3.8e-82	89.53	hypothetical protein SDJN02_18523, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022927166.1	4.2e-81	88.95	uncharacterized protein LOC111434099 [Cucurbita moschata]	[more]

BLAST of CmaCh13G005870 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33785	FAMILY NOT NAMED	coord: 1..172
None	No IPR available	PANTHER	PTHR33785:SF8	SUBFAMILY NOT NAMED	coord: 1..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G005870.1	CmaCh13G005870.1	mRNA