CmaCh13G003940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G003940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	agamous-like MADS-box protein AGL80
Location	Cma_Chr13: 4498887 .. 4502691 (-)
RNA-Seq Expression	CmaCh13G003940
Synteny	CmaCh13G003940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTCTGTGGGATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTTGTTGGGCTCGAGAGGGTTCTTGCTAAGTTCAAAAGCCTATCGGAGATGGAGCAATGCAATAAGATGGTGAATCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGAGAGAAACGCGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCACCACGAGATCTCAATATCATTGATTTGTATGATCTTGTGTGGTTGGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACTGAACCGCAGGTCGTGTCGGCAGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGAAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGGTGCATTTTGGTCGAACAATGGCTCTCCTTGAAAAGGAATTGTGTTGGGGTTGGTCTTTAAATTTTTAAGCTTAGATTCCGAAAGAGGGTGAAGAACCTTTTCTCATCTCTCTTCGTCAATAAATAATTGATCGGGTGTTAATTGGGTTGTACGGGTTTATGTTCTTACATTTTTTGTAATGACCGTAGATTTCTACTTACCTGAGTTGCTACGATCATCATAGCGTGATCATTTCTTTGCGCAAATAAACGTTTGAACTTCTTCATGAGACATAAAGTTCATCTTAAAACACTATTACGTACTTTGTTTGAAAACATCTTTAAAATGGCACAACGGAATAAATAAACATTTAAATAAAAAACATCATATTTTGCCGTAAGTCTAAGAAAATAAATGCAACTACCATATGCATGTGTCATGGTCTCTAGTTGTGATGTCGTCGTCAACTACACAGAGATGTCTTGCCTTTACGTGAAATAGAAGTAGCACGTGGCTTGAGTATTTTTAGAAATACTCGGTAAGTGACCGTACTATTGGGGTTAGATGCAATCACATACCATCATGAGTGGGACTTATCATAATCAGTCTATATTCGTTAGGCAACTATCCTAAATGGGTTAATTGGATGTGTATTTATTAATCTACACATGGTCCACACGGTCCACACGTACAAGTATGGACCCACCAGTCAATTCACACACCTTCTAGGCCACTTTTTTGTCGGGCGAGCATTCTCTAGTAGTTGTTTATGTCGGATACCCATTAGGAATAACGACCGTTGTAGCAACATTATGATAAACATAATAATCATTTCCTGCGTCATAATATACGCGTCTGTATCATAGTAAGGGGTATCTCCAAATGCATGAACACACAATGATGCATGAGGTCTTAACATTTTTTCTTTTCCATTATCATATATGACAATCCCTCTATCGTTTTCCTTCATATCATATCATTATCATAACATTTCCATACATGAAACTGGGGTCGTGCATCATATCATATCTCAAATACATCATCAAACACATCGTATCATAACATTCACATATCATATCATATTTATATCGTTTCATAAATATTTCACACGCGTCCAGCATATGACACATGCAAAACCACGAGGCACGTGTCATCACACAACATCCATTTTAACTAAACTCATAGTAAGACTACATACTTGAATGACCTTAGCCGAAGTTCTATCTAACTCCAAATTAGCTTACTTTCGTCCCTCCAATTTGTACTCACTTATGTCAAAATGGTTCACTCTTTTTGTCTAACATACCATGCATTAGATACTATGATTTCATAATATATTTAATTGTTCTTGGTATTTAATTTTCTAACTCACCTAAACTTAAGAAAATTGATGAAAACAATACCGCTACTACATGCATGACATGACTATCATATGTAGAAATTGTTCAAAACATTTTATGTTTAAAAATTGTCATGAGTTTAAAAAAACCGTGCAAACGTAGTAAAAATATAATTGAAGTAGTAAAGAAAACATCCCGTATCAAGGTTCAAAGATGAAATTACGATTAAACCATCTTAACAGTGGAACTATGGCACAAATACGAAAAACTATCTGGCGTGACCTCATCTAGCATCGTTGTCATTCGTACATGGGGTCGTTGCTCAGTATTTAAAAATACACCATAAATAATTCTAGTATCGAAATCAAAAAATGCAATCACATGCAACGTGTTCATACTAATGGAACGTAGTTTAATATGGGGAATTAAAATATACCAAGGAGGATAAGAATTCAATTAATTAAGTTTCATCTGAAGCTGTCAATACACAACACACCAAAACCCATTTCTTAATTTTTGAGAAAGAAGGTGAAACTGCCATGATCTTCAGCCCCTTCAATTCCTAACCTGACCTCTGGCCCTCCGCCGTGGGGCTCCAGAGGGTTGTCTCCAAGTTCAAAAGCCTGTCGGAGATGGAGCAATGCAATAAGATGGTCAACCAAGAGGCATTCCTTCACGACCGCATCGCCAAAGCCGCCGAGCAACTCGAGAAGTAGTAGACGGAGAACCGTGAGAAGGAGATTGTTAGACTCATGTTTCAAAGCCTCATCGTGGGAGTGACTATGCTACAAGATCTTAATGTCATTTATTCAATGTAACAACCATAATCACTATTAATAGATATTGTTCTCTTCGAACTTTCTCTCATGACAGAGAGGTTTTTGCATTCTTATAAATAATGTTTTGTTCTCCTCACAAACTAATAATGTTTTGTTCTCCTCACAAACTGATGTAGGATCTCACAATCCACCCCCTTTCGGGATCCAGCGTTCTTACTGGCACACCGCCTCATGTCCACTCCTCTTTGGGGCTCAACCTTCTTGCCGGCACATCGTCTGGTGTCGAGCTCTAATATTATTTGTAACAGTTATCTTTAGACTTTCCCTTTCAAGCTTCCCCCAAGGTTTCATTCGGTCCACAACCAATGTGGGATATCAAAATTTAATTCTCTAGTTTAAGATAGTTAATGTGTTGGCTCTTGATTTTTTGAACCTATGAGTGATCAACAACAAATAAACTTACGGTTGGAATGTATATGGACTATGGTTGGATAAATTAATTGATGCTTACGTGTGATTATTAATTATATTCTAATAATTTTTTTGTGATGCTTGTATTCCCTATTTGTTGATCATGTTTGCTAAGTTAATAGGATCACTTTTATGTCATCTAGATACCATAATGTAGATAAGCACGAATAAAATACCCTAAAAACTTAAGTACACCTGTCATAATAAGTATAGAAGTATAATGTGGATCATCTCATTGAACCATGATTCTTAAAACGGACCCTCATGCATGTCGAATATCACTCGAGTACAAATTACTCCTCCAGCATGTTACATACAAACACGTTGCTATATTATTATAGGCCCCTCCTTTCCTTTCCGTTGATTTTCAGCAGCGTGAGCATATGTCAATCCATACTCAAGCCTAGGGGTACGTAAACAAGTACAAGCCGTCATGTCATATATGTCACAGCGGTTTTCTCATCCGAAATTTTATTCGAACTTTTTTTAATTATGAAGTATAACTGTGAGATTACTCAAAGAAGACCTTGATGAATGCTTTTATTCAAGAAAATCAGTCAATTCACAGCTAGCAAAGGCAATGGAAGGGTGCCATATGCAAGCTGAACAGAGAAAATGA

mRNA sequence

ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTCTGTGGGATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTTGTTGGGCTCGAGAGGGTTCTTGCTAAGTTCAAAAGCCTATCGGAGATGGAGCAATGCAATAAGATGGTGAATCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGAGAGAAACGCGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCACCACGAGATCTCAATATCATTGATTTGTATGATCTTGTGTGGTTGGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACTGAACCGCAGGTCGTGTCGGCAGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGAAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGCCCCTTCAATTCCTAACCTGACCTCTGGCCCTCCGCCGTGGGGCTCCAGAGGGTTGTCTCCAAGTTCAAAAGCCTGTCGGAGATGGAGCAATGCAATAAGATGGTCAACCAAGAGGCATTCCTTCACGACCGCATCGCCAAAGCCGCCGAGCAACTCGAGAAGTAGTAGACGGAGAACCGTGAGAAGGAGATTTATAACTGTGAGATTACTCAAAGAAGACCTTGATGAATGCTTTTATTCAAGAAAATCAGTCAATTCACAGCTAGCAAAGGCAATGGAAGGGTGCCATATGCAAGCTGAACAGAGAAAATGA

Coding sequence (CDS)

ATGACAAGAAAGAAGGTGAAGCTGACATACATAACAAATGATGCAGCAAGAAAAGCCACATTCAAGAAGAGGAAGAAGGGCTTAATGAAGAAGCTCACCGAGCTCACCACACTCTGTGGGATCGAGGCGTGCGCCATAATTTTCAGTCCCTTCAATTCTCAACCCGATCTCTGGCCCTCTGTTGTTGGGCTCGAGAGGGTTCTTGCTAAGTTCAAAAGCCTATCGGAGATGGAGCAATGCAATAAGATGGTGAATCAAGAGACCTTCCTCCGTGACCGCATAGCTAAAGCGACTGACCAACTCAAGAAGTTGCAAAGAGAGAAACGCGAGAAGGAGATCACAAGACTCATGTTTGAAAGCCTCGTGGCTGGAGCGACTCCACCACGAGATCTCAATATCATTGATTTGTATGATCTTGTGTGGTTGGTTGATGAGACAATGACTGATGTTTGTAAGAGGATTGAGTTGCTTACGACAACTATGACTGAACCGCAGGTCGTGTCGGCAGTCGAGCCGTCGTGGTTCATGGAGATGATGAGTCATGAAGCCTATGATGATCAAATGGGATTCAAGATTTGGGATGATGTGATTCAACTTCCAAATGATGATAACCATGCCCCTTCAATTCCTAACCTGACCTCTGGCCCTCCGCCGTGGGGCTCCAGAGGGTTGTCTCCAAGTTCAAAAGCCTGTCGGAGATGGAGCAATGCAATAAGATGGTCAACCAAGAGGCATTCCTTCACGACCGCATCGCCAAAGCCGCCGAGCAACTCGAGAAGTAGTAGACGGAGAACCGTGAGAAGGAGATTTATAACTGTGAGATTACTCAAAGAAGACCTTGATGAATGCTTTTATTCAAGAAAATCAGTCAATTCACAGCTAGCAAAGGCAATGGAAGGGTGCCATATGCAAGCTGAACAGAGAAAATGA

Protein sequence

MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMSHEAYDDQMGFKIWDDVIQLPNDDNHAPSIPNLTSGPPPWGSRGLSPSSKACRRWSNAIRWSTKRHSFTTASPKPPSNSRSSRRRTVRRRFITVRLLKEDLDECFYSRKSVNSQLAKAMEGCHMQAEQRK

Homology

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BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot
Match: Q9FJK3 (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=1 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 2.2e-43
Identity = 90/163 (55.21%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI+ND++RKATFKKRKKGLMKK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
             G++RV+++F++L EM+Q  KMV+QE FL+ RIAKAT+ L++ +++ RE E+T +MF+ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTE 164
           L+ G      LNI+DL DL +++++ + DV +RIE+L  + TE
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTE 162

[Close]

BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot
Match: Q7XJK8 (MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 PE=1 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 7.2e-34
Identity = 82/179 (45.81%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           ++K+KL+ I N  +RK TF KRKKG+ KKLTEL TLCG+EACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLV 122
           G+E V++KF  LS +++  KMV+QETF+  RIAK  +QL+KL+ E    +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELL------TTTMTEPQVVSAVEPSWF 176
            G T   +L+  DL DL   +D+ +  + +RIE+L      ++++  P V +A  P  F
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAAPVGF 179

[Close]

BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot
Match: O80805 (MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.1e-31
Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           R K+KL++I ND+ RK TF KRKKG++KK  EL TLCG++ACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLV 122
           G+E V++KF   S +++  KMV+QETFLR RIAK T++L+KL+ E R  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELL 158
            G      L+  DL DL   +++ +  V +R+E+L
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEIL 155

[Close]

BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot
Match: Q7XJK5 (Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 4.2e-26
Identity = 67/152 (44.08%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 4   KKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVG 63
           KKVKL+ I N+ +RK +F KRK G+ KKL EL+TLCG++ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFMKRKNGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLVA 123
            ++V +KF  +    +  KM++QET L +RI KA +QLK L  E RE ++ R MF+  V 
Sbjct: 62  AKKVASKFLEMPRTARTRKMMDQETHLMERITKAKEQLKNLAAENRELQVRRFMFD-CVE 121

Query: 124 GATPPRDLNIIDLYDLVWLVDETMTDVCKRIE 156
           G       +  DL DL+  ++  +  +  RIE
Sbjct: 122 GKMSQYRYDAKDLQDLLSCMNLYLDQLNGRIE 152

[Close]

BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot
Match: Q7XJK6 (Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.4e-26
Identity = 66/152 (43.42%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 4   KKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVVG 63
           KKVKL+ I N+ +RK +F KRK G+ KKL EL+TLCG++ACA+I+SPF   P+ WPS  G
Sbjct: 2   KKVKLSLIANERSRKTSFIKRKDGIFKKLHELSTLCGVQACALIYSPFIPVPESWPSREG 61

Query: 64  LERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLVA 123
            ++V ++F  +    +  KM++QET+L +RI KA +QLK L  E RE ++ R MF+  V 
Sbjct: 62  AKKVASRFLEMPPTARTKKMMDQETYLMERITKAKEQLKNLAAENRELQVRRFMFD-CVE 121

Query: 124 GATPPRDLNIIDLYDLVWLVDETMTDVCKRIE 156
           G       +  DL DL   ++  +  +  RIE
Sbjct: 122 GKMSQYHYDAKDLQDLQSCINLYLDQLNGRIE 152

[Close]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL
Match: A0A6J1KLQ8 (agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.9e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           HEAYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL
Match: A0A6J1EG77 (agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC111434044 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.3e-106
Identity = 200/205 (97.56%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRE REKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVW VDETMTDVCKRIELLTTTMTEP V SAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           H AYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL
Match: A0A0A0LVU5 (MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 4.2e-77
Identity = 158/209 (75.60%), Postives = 176/209 (84.21%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITR+MF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+ELLT   +    V+  EPSWFMEM++
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSR--VATNEPSWFMEMVN 180

Query: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNH 206
             A D D MGF I DDVIQLP+   DDNH
Sbjct: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNH 207

[Close]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL
Match: A0A5A7UEU7 (Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold302G001350 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 156/209 (74.64%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITRLMF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180

Query: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNH 206
               D D MGF I DDVIQLP+    DNH
Sbjct: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNH 208

[Close]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL
Match: A0A1S3C968 (agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 156/209 (74.64%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITRLMF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRLMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+E LT   +   V +  EPSWFMEM++
Sbjct: 121 LVAGATPPPDLNVIDLNDLGWLVDQKMADIGKRMESLTVNRSSSHVATN-EPSWFMEMVN 180

Query: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNH 206
               D D MGF I DDVIQLP+    DNH
Sbjct: 181 QGGNDEDHMGFNIGDDVIQLPSFGEYDNH 208

[Close]

BLAST of CmaCh13G003940 vs. NCBI nr
Match: XP_023001635.1 (agamous-like MADS-box protein AGL80 [Cucurbita maxima])

HSP 1 Score: 405.6 bits (1041), Expect = 3.8e-109
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           HEAYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. NCBI nr
Match: XP_023520234.1 (agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 398.3 bits (1022), Expect = 6.1e-107
Identity = 201/205 (98.05%), Postives = 202/205 (98.54%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           +VGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRE REKEITRLMFES
Sbjct: 61  IVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEP VVSAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPPVVSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           H AYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. NCBI nr
Match: XP_022927107.1 (agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG7019390.1 Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.4 bits (1012), Expect = 8.8e-106
Identity = 200/205 (97.56%), Postives = 200/205 (97.56%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRE REKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPPRDLNIIDLYDLVW VDETMTDVCKRIELLTTTMTEP V SAVEPSWFMEMMS
Sbjct: 121 LVAGATPPRDLNIIDLYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           H AYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. NCBI nr
Match: KAG6583750.1 (Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391.3 bits (1004), Expect = 7.5e-105
Identity = 198/205 (96.59%), Postives = 199/205 (97.07%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS
Sbjct: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
           VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRE REKEITRLMFES
Sbjct: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQRENREKEITRLMFES 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LV GATPPRDLNII+LYDLVW VDETMTDVCKRIELLTTTMTEP V SAVEPSWFMEMMS
Sbjct: 121 LVVGATPPRDLNIIELYDLVWFVDETMTDVCKRIELLTTTMTEPPVGSAVEPSWFMEMMS 180

Query: 181 HEAYDDQMGFKIWDDVIQLPNDDNH 206
           H AYDDQMGFKIWDDVIQLPNDDNH
Sbjct: 181 HGAYDDQMGFKIWDDVIQLPNDDNH 205

[Close]

BLAST of CmaCh13G003940 vs. NCBI nr
Match: KAE8652877.1 (hypothetical protein Csa_013025 [Cucumis sativus])

HSP 1 Score: 300.4 bits (768), Expect = 1.7e-77
Identity = 160/213 (75.12%), Postives = 178/213 (83.57%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YITNDA+RKATFKKRKKGL+KKL ELTTLCGIEACAIIF+P NSQPDLWPS
Sbjct: 1   MTRKKVKLAYITNDASRKATFKKRKKGLLKKLAELTTLCGIEACAIIFNPSNSQPDLWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
            +GL++VL+KFKSL EMEQC KMVNQETFLRDRIAKA DQLKKLQRE REKEITR+MF+S
Sbjct: 61  TLGLQKVLSKFKSLPEMEQCKKMVNQETFLRDRIAKAADQLKKLQRENREKEITRVMFQS 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQVVSAVEPSWFMEMMS 180
           LVAGATPP DLN+IDL DL WLVD+ M D+ KR+ELLT   +    V+  EPSWFMEM++
Sbjct: 121 LVAGATPPLDLNVIDLNDLGWLVDQKMADIGKRMELLTVNRSSR--VATNEPSWFMEMVN 180

Query: 181 HEAYD-DQMGFKIWDDVIQLPN---DDNHAPSI 210
             A D D MGF I DDVIQLP+   DDNH  SI
Sbjct: 181 QGANDEDHMGFNIGDDVIQLPSFGEDDNHDSSI 211

[Close]

BLAST of CmaCh13G003940 vs. TAIR 10
Match: AT5G48670.1 (AGAMOUS-like 80 )

HSP 1 Score: 177.6 bits (449), Expect = 1.6e-44
Identity = 90/163 (55.21%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKKVKL YI+ND++RKATFKKRKKGLMKK+ EL+TLCGI ACAII+SP+++ P++WPS
Sbjct: 1   MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
             G++RV+++F++L EM+Q  KMV+QE FL+ RIAKAT+ L++ +++ RE E+T +MF+ 
Sbjct: 61  NSGVQRVVSEFRTLPEMDQHKKMVDQEGFLKQRIAKATETLRRQRKDSRELEMTEVMFQC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTE 164
           L+ G      LNI+DL DL +++++ + DV +RIE+L  + TE
Sbjct: 121 LI-GNMEMFHLNIVDLNDLGYMIEQYLKDVNRRIEILRNSGTE 162

[Close]

BLAST of CmaCh13G003940 vs. TAIR 10
Match: AT1G65300.1 (AGAMOUS-like 38 )

HSP 1 Score: 146.0 bits (367), Expect = 5.1e-35
Identity = 82/179 (45.81%), Postives = 118/179 (65.92%), Query Frame = 0


Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           ++K+KL+ I N  +RK TF KRKKG+ KKLTEL TLCG+EACA+++SPFNS P+ WPS  
Sbjct: 2   KRKMKLSLIENSVSRKTTFTKRKKGMTKKLTELVTLCGVEACAVVYSPFNSIPEAWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLV 122
           G+E V++KF  LS +++  KMV+QETF+  RIAK  +QL+KL+ E    +I  LMF  L 
Sbjct: 62  GVEDVVSKFMELSVLDRTKKMVDQETFISQRIAKEKEQLQKLRDENHNSQIRELMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELL------TTTMTEPQVVSAVEPSWF 176
            G T   +L+  DL DL   +D+ +  + +RIE+L      ++++  P V +A  P  F
Sbjct: 122 KGETNVYNLDGRDLQDLSLYIDKYLNGLTRRIEILIENGESSSSLPLPIVANAAAPVGF 179

[Close]

BLAST of CmaCh13G003940 vs. TAIR 10
Match: AT5G26630.1 (MADS-box transcription factor family protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.3e-33
Identity = 82/200 (41.00%), Postives = 127/200 (63.50%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTR+KVK+T+I N+ ARK+TFKKRKKGL+KK  EL  LCG+   A++ SP+   P++WPS
Sbjct: 1   MTRQKVKMTFIENETARKSTFKKRKKGLLKKAQELGILCGVPIFAVVNSPYELNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
                +V++++K++S M++  KMVNQETFL+ RI KAT+  KKL++E +E E+  +MF+ 
Sbjct: 61  REAANQVVSQWKTMSVMDKTKKMVNQETFLQQRITKATESWKKLRKENKELEMKNIMFDC 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELLTTTMTEPQ--VVSAVEPSWFMEM 180
           L +G T    +   +L D  +++++ + DV +RIE+L     EP   +V    P+    M
Sbjct: 121 L-SGKTLVSSIEKTELRDFGYVIEQQLKDVNRRIEILKRN-NEPSSALVPVAAPTTSSVM 180

Query: 181 MSHEAYDDQMGF--KIWDDV 197
              E     +GF  K+ D +
Sbjct: 181 PVVEMGSSSVGFYDKVRDQI 198

[Close]

BLAST of CmaCh13G003940 vs. TAIR 10
Match: AT1G65330.1 (MADS-box transcription factor family protein )

HSP 1 Score: 138.7 bits (348), Expect = 8.1e-33
Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 3   RKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPSVV 62
           R K+KL++I ND+ RK TF KRKKG++KK  EL TLCG++ACA+I SP+NS  + WPS  
Sbjct: 2   RGKMKLSFIENDSVRKTTFTKRKKGMLKKFNELVTLCGVDACAVIRSPYNSIQEPWPSRE 61

Query: 63  GLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFESLV 122
           G+E V++KF   S +++  KMV+QETFLR RIAK T++L+KL+ E R  +I  LMF  L 
Sbjct: 62  GVEEVMSKFMEFSVLDRTKKMVDQETFLRQRIAKETERLQKLRDENRNSQIRDLMFGCL- 121

Query: 123 AGATPPRDLNIIDLYDLVWLVDETMTDVCKRIELL 158
            G      L+  DL DL   +++ +  V +R+E+L
Sbjct: 122 KGEVDVSHLHGRDLLDLNVFLNKYLNGVIRRVEIL 155

[Close]

BLAST of CmaCh13G003940 vs. TAIR 10
Match: AT3G05860.1 (MADS-box transcription factor family protein )

HSP 1 Score: 125.6 bits (314), Expect = 7.1e-29
Identity = 66/150 (44.00%), Postives = 101/150 (67.33%), Query Frame = 0


Query: 1   MTRKKVKLTYITNDAARKATFKKRKKGLMKKLTELTTLCGIEACAIIFSPFNSQPDLWPS 60
           MTRKK+ L+YITN++ RKATF KRKKGL+KK+ EL+ LCGIEACA+I+SPFNS P++WPS
Sbjct: 1   MTRKKLNLSYITNESMRKATFNKRKKGLVKKIHELSVLCGIEACAVIYSPFNSNPEVWPS 60

Query: 61  VVGLERVLAKFKSLSEMEQCNKMVNQETFLRDRIAKATDQLKKLQREKREKEITRLMFES 120
              ++ V+  F+ L+++EQ  KMV+ E F+R  I+K  +   K   +  E+ +   MF+ 
Sbjct: 61  NSEVKNVMENFEMLTKLEQEKKMVSHEGFIRQNISKTMESNNKKMIDNAERTMKEAMFQ- 120

Query: 121 LVAGATPPRDLNIIDLYDLVWLVDETMTDV 151
           L++G     +L   +  DL   +D+ + ++
Sbjct: 121 LLSGKGEKLNLTDRNREDLCKYIDQYLKEL 149

The following BLAST results are available for this feature:

BLAST of CmaCh13G003940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJK3	2.2e-43	55.21	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana OX=3702 GN=AGL80 PE=...	[more]
Q7XJK8	7.2e-34	45.81	MADS-box transcription factor PHERES 2 OS=Arabidopsis thaliana OX=3702 GN=PHE2 P...	[more]
O80805	1.1e-31	48.39	MADS-box transcription factor PHERES 1 OS=Arabidopsis thaliana OX=3702 GN=PHE1 P...	[more]
Q7XJK5	4.2e-26	44.08	Agamous-like MADS-box protein AGL90 OS=Arabidopsis thaliana OX=3702 GN=AGL90 PE=...	[more]
Q7XJK6	9.4e-26	43.42	Agamous-like MADS-box protein AGL36 OS=Arabidopsis thaliana OX=3702 GN=AGL36 PE=...	[more]

BLAST of CmaCh13G003940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KLQ8	1.9e-109	100.00	agamous-like MADS-box protein AGL80 OS=Cucurbita maxima OX=3661 GN=LOC111495707 ...	[more]
A0A6J1EG77	4.3e-106	97.56	agamous-like MADS-box protein AGL80 OS=Cucurbita moschata OX=3662 GN=LOC11143404...	[more]
A0A0A0LVU5	4.2e-77	75.60	MADS-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G191680 PE...	[more]
A0A5A7UEU7	1.3e-75	74.64	Agamous-like MADS-box protein AGL80 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C968	1.3e-75	74.64	agamous-like MADS-box protein AGL80 OS=Cucumis melo OX=3656 GN=LOC103498216 PE=4...	[more]

BLAST of CmaCh13G003940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001635.1	3.8e-109	100.00	agamous-like MADS-box protein AGL80 [Cucurbita maxima]	[more]
XP_023520234.1	6.1e-107	98.05	agamous-like MADS-box protein AGL80 [Cucurbita pepo subsp. pepo]	[more]
XP_022927107.1	8.8e-106	97.56	agamous-like MADS-box protein AGL80 [Cucurbita moschata] >KAG7019390.1 Agamous-l...	[more]
KAG6583750.1	7.5e-105	96.59	Agamous-like MADS-box protein AGL80, partial [Cucurbita argyrosperma subsp. soro...	[more]
KAE8652877.1	1.7e-77	75.12	hypothetical protein Csa_013025 [Cucumis sativus]	[more]

BLAST of CmaCh13G003940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48670.1	1.6e-44	55.21	AGAMOUS-like 80	[more]
AT1G65300.1	5.1e-35	45.81	AGAMOUS-like 38	[more]
AT5G26630.1	1.3e-33	41.00	MADS-box transcription factor family protein	[more]
AT1G65330.1	8.1e-33	48.39	MADS-box transcription factor family protein	[more]
AT3G05860.1	7.1e-29	44.00	MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..264
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 245..259
None	No IPR available	PANTHER	PTHR48019:SF17	AGAMOUS-LIKE MADS-BOX PROTEIN AGL80	coord: 1..174
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..174
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 39.73 coord: 23..38 score: 57.74 coord: 38..59 score: 27.22
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 4.3E-24 score: 96.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 11..50 e-value: 2.2E-17 score: 62.3
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..49 score: 17.394756
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..115 e-value: 4.6E-17 score: 63.9
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..95
IPR033897	MADS SRF-like	CDD	cd00266	MADS_SRF_like	coord: 2..85 e-value: 4.8022E-18 score: 75.3743

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G003940.1	CmaCh13G003940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0000987	cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding