CmaCh13G003650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G003650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	leucine-rich repeat extensin-like protein 3 isoform X1
Location	Cma_Chr13: 4178803 .. 4180268 (+)
RNA-Seq Expression	CmaCh13G003650
Synteny	CmaCh13G003650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGTTACCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGATTCAGATGCCATTTGGGTCTATTTCATAGCCCTTCCTTTTCATTTCCTCTGTTTTTAGTGCTGCAGCCGACGGTTTTCCAAAACAGAGCATCCATGGCGGACGCCAAGGTCATTTCTCTCTGTTTTTGAGTTTCTTGTCTCTGTTTTGCTTATTCTGAGAGAGTTTAATTGTTTATGCAGAAGGTTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAAAAAGTTCTCTGCAAATTTCCTCGTCAGTTCTTTCTCCATTTCTACTGTTCTTCTGTTCTTCACTCTCTTTTTCCAAATTGATTTTGTTTCTTTGAACGCCAGAAATTCGGGACCAGATTTATGATGAGAAACAGAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCGCCGGCTAAGCCTGACCCTCCGCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACGCACCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGACCCTCCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGAACCTCCACCACAGAAAAAGGCCGACCCACCAGCACCCAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCACCACCGCCAGCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTCTGCCGCCGGCTCAACCCGAACCGTTCCCTGTTAACATGTGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTATGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGAAATACGTGGCAGTTTGTGAATGGTGGTGATTAATGCTCATGTGCCTTTCACGGTCATGATAATAAGGAAGTTGGAGCTGAATTGCATTACAAGGCACTTAATGTTAAATGTTGGTTATTGGGTTTTGTATAATTCAAGTTCTTGTCAAATATAAGTGTTGGGATTTATGACCCATTTAATTTTAATAAAGTGAATTATCATTGAGTCAACTCGTCAGGTTGACTCCCAAGTGTTCGGTTCGGTCATCTCTTTAATAATAAATAAGTTAAATTTGATTTGATTTCTAT

mRNA sequence

TGGTTACCAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGATTCAGATGCCATTTGGGTCTATTTCATAGCCCTTCCTTTTCATTTCCTCTGTTTTTAGTGCTGCAGCCGACGGTTTTCCAAAACAGAGCATCCATGGCGGACGCCAAGAAGGTTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAAAAAGTTCTCTGCAAATTTCCTCAAATTCGGGACCAGATTTATGATGAGAAACAGAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCGCCGGCTAAGCCTGACCCTCCGCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACGCACCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGACCCTCCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGAACCTCCACCACAGAAAAAGGCCGACCCACCAGCACCCAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCACCACCGCCAGCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTCTGCCGCCGGCTCAACCCGAACCGTTCCCTGTTAACATGTGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTATGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGAAATACGTGGCAGTTTGTGAATGGTGGTGATTAATGCTCATGTGCCTTTCACGGTCATGATAATAAGGAAGTTGGAGCTGAATTGCATTACAAGGCACTTAATGTTAAATGTTGGTTATTGGGTTTTGTATAATTCAAGTTCTTGTCAAATATAAGTGTTGGGATTTATGACCCATTTAATTTTAATAAAGTGAATTATCATTGAGTCAACTCGTCAGGTTGACTCCCAAGTGTTCGGTTCGGTCATCTCTTTAATAATAAATAAGTTAAATTTGATTTGATTTCTAT

Coding sequence (CDS)

ATGGCGGACGCCAAGAAGGTTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAAAAAGTTCTCTGCAAATTTCCTCAAATTCGGGACCAGATTTATGATGAGAAACAGAACCTTGTGATTATCAAAGTGGTTTGTTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCGCCGGCTAAGCCTGACCCTCCGCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACGCACCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGACCCTCCACCACCGAAAAAGGCCGACCCACCGCCACCCAAGGCCGAACCTCCACCACAGAAAAAGGCCGACCCACCAGCACCCAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCTCCGCCGCCCAAAAAGGCCGACCCACCACCGCCAGCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTCTGCCGCCGGCTCAACCCGAACCGTTCCCTGTTAACATGTGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTATGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGA

Protein sequence

MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPPPPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADPPPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM

Homology

[Close]

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL
Match: A0A6J1I6S0 (leucine-rich repeat extensin-like protein 3 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 295

[Close]

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL
Match: A0A6J1IC87 (leucine-rich repeat extensin-like protein 3 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.3e-149
Identity = 294/295 (99.66%), Postives = 294/295 (99.66%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADA KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADA-KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 294

[Close]

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL
Match: A0A6J1EI38 (leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.2e-143
Identity = 286/303 (94.39%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD-PPPAKPDPPPPKKADPPPPKADP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD PPPAKPDPPPPKKADPPPPKADP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 PPPK-------KADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADP 180
           PPPK       KAD PPPKKADPPPPKADPPPPKKADPPPPKA+PPP KKADPP PKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGM 240
           PPPKKADPPPPKKADPPP  KADPPPPKKVDP+PPAQPEPFPVN+CVPVPGYPPAYPIGM
Sbjct: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240

Query: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 296
           CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC
Sbjct: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 300

[Close]

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL
Match: A0A6J1IDR1 (leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111471668 PE=4 SV=1)

HSP 1 Score: 513.5 bits (1321), Expect = 6.0e-142
Identity = 280/295 (94.92%), Postives = 280/295 (94.92%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPP               PKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPP---------------PKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 280

[Close]

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL
Match: A0A6J1EIF2 (leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 7.9e-142
Identity = 287/311 (92.28%), Postives = 290/311 (93.25%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD-PPPAKPDPPPPKKADPPPPKADP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD PPPAKPDPPPPKKADPPPPKADP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 PPPK-------KADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADP 180
           PPPK       KAD PPPKKADPPPPKADPPPPKKADPPPPKA+PPP KKADPP PKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPP--------AKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGY 240
           PPPKKADPPPPKKADPPPP         KADPPPPKKVDP+PPAQPEPFPVN+CVPVPGY
Sbjct: 181 PPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGY 240

Query: 241 PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL 296
           PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL
Sbjct: 241 PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL 300

[Close]

BLAST of CmaCh13G003650 vs. NCBI nr
Match: XP_022973157.1 (leucine-rich repeat extensin-like protein 3 isoform X1 [Cucurbita maxima])

HSP 1 Score: 545.4 bits (1404), Expect = 3.0e-151
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 295

[Close]

BLAST of CmaCh13G003650 vs. NCBI nr
Match: XP_022973158.1 (leucine-rich repeat extensin-like protein 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 538.9 bits (1387), Expect = 2.8e-149
Identity = 294/295 (99.66%), Postives = 294/295 (99.66%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADA KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADA-KVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 294

[Close]

BLAST of CmaCh13G003650 vs. NCBI nr
Match: XP_022927591.1 (leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata])

HSP 1 Score: 517.3 bits (1331), Expect = 8.6e-143
Identity = 286/303 (94.39%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD-PPPAKPDPPPPKKADPPPPKADP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD PPPAKPDPPPPKKADPPPPKADP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 PPPK-------KADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADP 180
           PPPK       KAD PPPKKADPPPPKADPPPPKKADPPPPKA+PPP KKADPP PKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGM 240
           PPPKKADPPPPKKADPPP  KADPPPPKKVDP+PPAQPEPFPVN+CVPVPGYPPAYPIGM
Sbjct: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240

Query: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 296
           CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC
Sbjct: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 300

[Close]

BLAST of CmaCh13G003650 vs. NCBI nr
Match: XP_022973159.1 (leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 513.5 bits (1321), Expect = 1.2e-141
Identity = 280/295 (94.92%), Postives = 280/295 (94.92%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPP 120

Query: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADPPPPKKADP 180
           PPKKADAPPPKKADPPPPKADPPPPKKADPPP               PKADPPPPKKADP
Sbjct: 121 PPKKADAPPPKKADPPPPKADPPPPKKADPPP---------------PKADPPPPKKADP 180

Query: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240
           PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG
Sbjct: 181 PPPKKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEG 240

Query: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 296
           QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 QGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 280

[Close]

BLAST of CmaCh13G003650 vs. NCBI nr
Match: XP_022927589.1 (leucine-rich repeat extensin-like protein 3 isoform X4 [Cucurbita moschata])

HSP 1 Score: 513.1 bits (1320), Expect = 1.6e-141
Identity = 287/311 (92.28%), Postives = 290/311 (93.25%), Query Frame = 0


Query: 1   MADAKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKK VVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD-PPPAKPDPPPPKKADPPPPKADP 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKAD PPPAKPDPPPPKKADPPPPKADP
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 PPPK-------KADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADP 180
           PPPK       KAD PPPKKADPPPPKADPPPPKKADPPPPKA+PPP KKADPP PKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPP--------AKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGY 240
           PPPKKADPPPPKKADPPPP         KADPPPPKKVDP+PPAQPEPFPVN+CVPVPGY
Sbjct: 181 PPPKKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGY 240

Query: 241 PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL 296
           PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL
Sbjct: 241 PPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYL 300

[Close]

BLAST of CmaCh13G003650 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 5.8e-28
Identity = 125/300 (41.67%), Postives = 159/300 (53.00%), Query Frame = 0


Query: 5   KKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64
           +KV +M LKVDL C +CYKKVKKVLCKFPQIRDQ++DEK N+VIIKVVCC+PE++ DK+C
Sbjct: 7   EKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLC 66

Query: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPPPPKK 124
            KG G IK+IEI     PP  +P  PP K  D  P  P+ P            +P  PK+
Sbjct: 67  SKGGGSIKTIEIVEPPKPPQPQPQQPPQKPKDAQPKAPEKP-----------KEPEKPKQ 126

Query: 125 ADAPPPKKADPPPPKADPPPPKKADPPPPKAEPPPQKKADPPAPKADP-PPPKKADPPPP 184
               P K  +P  PK  P  PK+    P K + P    A  PAP A P P P  A  P P
Sbjct: 127 ----PEKLKEPEKPK-QPEKPKE----PEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAP 186

Query: 185 KKADPPPPAKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYPIGMCCSQCYEGQGG 244
           K+  PPP A         +  +P  QP                     MCC   Y+G  G
Sbjct: 187 KQPGPPPQA---------IPMMPQGQP--------------------AMCCGPYYDGY-G 246

Query: 245 GPCYSGFGRPGPCCDGCASGRPIYDSYGGG--------RPCYVSHCEYLNEENASGCSVM 296
           GP ++G+G P    +    GRP+Y+S+GGG        R C+V+ C+Y +EEN   CS+M
Sbjct: 247 GPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 254

[Close]

BLAST of CmaCh13G003650 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 3.3e-15
Identity = 63/126 (50.00%), Postives = 82/126 (65.08%), Query Frame = 0


Query: 4   AKKVVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKI 63
           A+KVV+M LKVDL C +CYKKVKK + KFPQI D+++DEK N +IIKVVC +PE+L +K+
Sbjct: 2   AEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKL 61

Query: 64  CCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPAKPDPPPPKKADPPPPKADPPPPK 123
           C KG G IKSI I   +PP P +P P PP+K    P  P P P +   P   +  P P  
Sbjct: 62  CYKGDGSIKSIVI--LEPPKPPQPQPQPPQK----PTAPAPAPAQAQAPALVRPAPVPVL 121

Query: 124 KADAPP 130
            + + P
Sbjct: 122 VSSSAP 121

[Close]

BLAST of CmaCh13G003650 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 1.6e-14
Identity = 102/271 (37.64%), Postives = 134/271 (49.45%), Query Frame = 0


Query: 34  QIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPK 93
           +IRDQ++DEK N+VIIKVVCC+PE++ DK+C KG G IK+IEI     PP  +P  PP K
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEIVEPPKPPQPQPQQPPQK 74

Query: 94  KADPPPAKPDPPPPKKADPPPPKADPPPPKKADAPPPKKADPPPPKADPPPPKKADPPPP 153
             D  P  P+ P            +P  PK+    P K  +P  PK  P  PK+    P 
Sbjct: 75  PKDAQPKAPEKP-----------KEPEKPKQ----PEKLKEPEKPK-QPEKPKE----PE 134

Query: 154 KAEPPPQKKADPPAPKADP-PPPKKADPPPPKKADPPPPAKADPPPPKKVDPLPPAQPEP 213
           K + P    A  PAP A P P P  A  P PK+  PPP A         +  +P  QP  
Sbjct: 135 KTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQA---------IPMMPQGQP-- 194

Query: 214 FPVNMCVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGG 273
                              MCC   Y+G  GGP ++G+G P    +    GRP+Y+S+GG
Sbjct: 195 ------------------AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGG 233

Query: 274 G--------RPCYVSHCEYLNEENASGCSVM 296
           G        R C+V+ C+Y +EEN   CS+M
Sbjct: 255 GCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 233

[Close]

BLAST of CmaCh13G003650 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 46.2 bits (108), Expect = 5.2e-05
Identity = 78/158 (49.37%), Postives = 89/158 (56.33%), Query Frame = 0


Query: 77  KPADPPPPKKPDPPPPKKADPPP-AKPDPPPPKKADPPP-PKADPPPPKKADAPPPKKAD 136
           KP+ PP   K  PPPPK + PPP  K  PPPPK + PPP PK  PPPPK +  PP  K  
Sbjct: 105 KPSPPPRTPKKSPPPPKPSSPPPIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKS 164

Query: 137 PPPPKADPPPPKKADPPP-PKAEP--PPQKKADPPAPKADPPPPKKADPPPPKKADPPPP 196
           PPPPK  P PPK + PPP PK  P  PP+  + PP+PK  PPPPK + P PPK + PPP 
Sbjct: 165 PPPPKPSPSPPKPSTPPPTPKKSPPSPPKPSSPPPSPKKSPPPPKPS-PSPPKPSTPPPT 224

Query: 197 AKADPPPPKKVDPLPPAQPEPFPVNMCVPVPGYPPAYP 230
            K  PPPPK   P P   P     +   P P   P  P
Sbjct: 225 PKKSPPPPKPSQPPPKPSPPRRKPSPPTPKPSTTPPSP 261

The following BLAST results are available for this feature:

BLAST of CmaCh13G003650 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G003650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6S0	1.4e-151	100.00	leucine-rich repeat extensin-like protein 3 isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1IC87	1.3e-149	99.66	leucine-rich repeat extensin-like protein 3 isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EI38	4.2e-143	94.39	leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=...	[more]
A0A6J1IDR1	6.0e-142	94.92	leucine-rich repeat extensin-like protein 3 isoform X3 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EIF2	7.9e-142	92.28	leucine-rich repeat extensin-like protein 3 isoform X4 OS=Cucurbita moschata OX=...	[more]

BLAST of CmaCh13G003650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022973157.1	3.0e-151	100.00	leucine-rich repeat extensin-like protein 3 isoform X1 [Cucurbita maxima]	[more]
XP_022973158.1	2.8e-149	99.66	leucine-rich repeat extensin-like protein 3 isoform X2 [Cucurbita maxima]	[more]
XP_022927591.1	8.6e-143	94.39	leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata]	[more]
XP_022973159.1	1.2e-141	94.92	leucine-rich repeat extensin-like protein 3 isoform X3 [Cucurbita maxima]	[more]
XP_022927589.1	1.6e-141	92.28	leucine-rich repeat extensin-like protein 3 isoform X4 [Cucurbita moschata]	[more]

BLAST of CmaCh13G003650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	5.8e-28	41.67	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	3.3e-15	50.00	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	1.6e-14	37.64	Heavy metal transport/detoxification superfamily protein	[more]
AT1G44191.1	5.2e-05	49.37	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..124
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..208
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..208
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 157..295
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 4..165
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 4..165 coord: 157..295
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 9..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G003650.1	CmaCh13G003650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding