CmaCh13G003040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATCGGCGTACTAGTAATTGTATGGTTGAGAAATATCCGCCGGGATACAACAACGTATTGGACCTGAATATGTTGGTCCTTTGGGAGTTCTTCAAGCTTTAGCAGATGGCACAAAACTACTTTTTAAAGAAAATCTGCTTCCATCTAGAGGTGATACGCGTTTATTCAGTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGATTATTGTATATAAATTGA ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATCGGCGTACTAGTAATTGTATGGTTGAGAAATATCCGCCGGGATACAACAACTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGATTATTGTATATAAATTGA ATGATAATTGATACATCACAAGTCCAAGATATCAATTCTTTTTCGAGATTGGAATTCTTAAAAGAAGTCTATGGAATTCTATGGGTGCTTGTCCCTATTTTGACTACTGTATTGGGAATCACAATCGGCGTACTAGTAATTGTATGGTTGAGAAATATCCGCCGGGATACAACAACTATCGGACCATCCATAGCAGTCATATCAATTTTACTAAGCTATTCAGTAATTCCTTTTGGTTATCGATTATTGTATATAAATTGA MIIDTSQVQDINSFSRLEFLKEVYGILWVLVPILTTVLGITIGVLVIVWLRNIRRDTTTIGPSIAVISILLSYSVIPFGYRLLYIN Homology
BLAST of CmaCh13G003040 vs. ExPASy Swiss-Prot
Match: Q2QD36 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhA PE=3 SV=1) HSP 1 Score: 112.8 bits (281), Expect = 1.9e-24 Identity = 74/123 (60.16%), Postives = 77/123 (62.60%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy Swiss-Prot
Match: Q1KXQ8 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Helianthus annuus OX=4232 GN=ndhA PE=3 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 7.4e-21 Identity = 67/123 (54.47%), Postives = 73/123 (59.35%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy Swiss-Prot
Match: Q06R75 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Jasminum nudiflorum OX=126431 GN=ndhA PE=3 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.8e-20 Identity = 64/123 (52.03%), Postives = 74/123 (60.16%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy Swiss-Prot
Match: Q0G9G4 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Liriodendron tulipifera OX=3415 GN=ndhA PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19 Identity = 64/123 (52.03%), Postives = 72/123 (58.54%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy Swiss-Prot
Match: Q0ZIW3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhA PE=3 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.1e-19 Identity = 64/123 (52.03%), Postives = 71/123 (57.72%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy TrEMBL
Match: A0A1P8LE62 (NADH-quinone oxidoreductase subunit H OS=Citrullus mucosospermus OX=519315 GN=ndhA PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy TrEMBL
Match: A0A2Z2CG87 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Coccinia grandis OX=387127 GN=ndhA PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy TrEMBL
Match: A0A346QNK2 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Hodgsonia macrocarpa OX=2184935 GN=ndhA PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy TrEMBL
Match: A0A6H0EQZ3 (NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic OS=Luffa aegyptiaca OX=3670 GN=ndhA PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. ExPASy TrEMBL
Match: A0A1P8LDV6 (NADH-quinone oxidoreductase subunit H OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ndhA PE=3 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. NCBI nr
Match: QZL38650.1 (NADH dehydrogenase subunit A [Citrullus naudinianus]) HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. NCBI nr
Match: YP_009525240.1 (NADH-plastoquinone oxidoreductase subunit 1 [Hodgsonia macrocarpa] >AXR94518.1 NADH-plastoquinone oxidoreductase subunit 1 [Hodgsonia macrocarpa] >AXR94603.1 NADH-plastoquinone oxidoreductase subunit 1 [Hodgsonia macrocarpa] >AXR94687.1 NADH-plastoquinone oxidoreductase subunit 1 [Hodgsonia macrocarpa] >AXR94772.1 NADH-plastoquinone oxidoreductase subunit 1 [Hodgsonia macrocarpa]) HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. NCBI nr
Match: YP_009326045.1 (NADH dehydrogenase subunit 1 [Citrullus lanatus] >YP_009348087.1 NADH dehydrogenase subunit 1 [Citrullus mucosospermus] >YP_009420850.1 NADH dehydrogenase subunit 1 [Citrullus colocynthis] >YP_009431612.1 NADH dehydrogenase subunit 1 [Citrullus amarus] >YP_009431698.1 NADH dehydrogenase subunit 1 [Citrullus rehmii] >APW82518.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris] >QZL38738.1 NADH dehydrogenase subunit A [Citrullus ecirrhosus] >APD52537.1 NADH dehydrogenase subunit 1 [Citrullus lanatus] >APW82603.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris] >APW82688.1 NADH dehydrogenase subunit 1 [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. NCBI nr
Match: YP_009456202.1 (NADH dehydrogenase subunit 1 [Lagenaria siceraria] >AUJ21967.1 NADH dehydrogenase subunit 1 [Lagenaria siceraria] >QNM38587.1 NADH-plastoquinone oxidoreductase subunit 1 [Lagenaria siceraria var. microcarpa]) HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. NCBI nr
Match: YP_009317441.1 (NADH dehydrogenase subunit 1 [Coccinia grandis] >YP_009753306.1 NADH dehydrogenase subunit A [Nothoalsomitra suberosa] >QIT04104.1 NADH dehydrogenase subunit A [Luffa aegyptiaca] >QKX48530.1 NADH-plastoquinone oxidoreductase subunit 1 [Luffa acutangula] >AOX48719.1 NADH dehydrogenase subunit 1 [Coccinia grandis] >AOX48804.1 NADH dehydrogenase subunit 1 [Coccinia grandis] >QIT06378.1 NADH dehydrogenase subunit A [Nothoalsomitra suberosa]) HSP 1 Score: 116.7 bits (291), Expect = 9.9e-23 Identity = 76/123 (61.79%), Postives = 78/123 (63.41%), Query Frame = 0
BLAST of CmaCh13G003040 vs. TAIR 10
Match: ATCG01100.1 (NADH dehydrogenase family protein ) HSP 1 Score: 77.8 bits (190), Expect = 4.7e-15 Identity = 57/123 (46.34%), Postives = 66/123 (53.66%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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