CmaCh13G002840 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCGTTATCCCAAGAAAAACGAACTGAACAACAACGCAGTTCCAGTTGGAGCGCTGATTCAGAGCAATGAATTTGGTTTCTGCGCGCACTCAAAATCCCCTTCGATGCGCTTCCCTTTCGATTTTACCCTCCTCCTTTAACCTCCCTTCCCACTTTCCCTCTCCTCTGCTTCTCAAGCCCTATGCTCCCGATTCCAAACTCTATTCTGCAAAACTAGCGACTACTAATGGCGACGGTCGTCGCAATTTCAGATCGCCTGTCGTTGTCAAGGCTTCAATAACTTCAGGCTACGGCCCAGAGATTGGAGAGAATCTGGGCGATGTTCGCATTTTTACTGCTGCTGGTGAGCCAGTTTTGTTCAAGGATCTCTGGGATCAGACTGAGGTACAACCATTGGCTCTTGTGTGTTTATTTACTGATTATTTCTCTGTCACTTTCTTTTTTTTGGTGCTTTTGTTTACATATAGGTGATGTTCTTTGGCTAATTGATTCTGATGATGGATGTGTGTTTAATTGATCAATGAACTGAAATCTCTAATATGAAAAAGAAGATTTAAGAATCAAACATGAAATTCTATCATGTACACGAGTTTTTATTGTCATTTTGCATAATTTAAAATGACCCAAATCAGAAGAAGCTATAAACATGGTTTGTTGGTAATTTATTTGGCTTCCTGAACTTTGATGTTTCTTTCCTTCTAACTATAGAGAAAAGTGAGCTCAACAATAATTCTAGCACCCTTATAAAAATTGTTTTGTTCTTCTCCCAATCGGTGTGGGATCTCACAATCCACCTGCCTTCAGGCCCAGTGTCATTGCTGGCACTCATTCCCTTCTCCAACCCCAATCCACCCCCTTCGAAGCCCAGCGTCCTTGCTGGTACACCACCTCATGTCGACCTCCTTCGAGGTTCATCCTTCTCACTGGCACATCGCTTGGTGTTTGGCTCTGGTACCAATTGAAACGGCTCAAGCCCACCGCTAGCAGATATTTTCCTCTTTGGGCTGACTTCCCCTCAAGATATTTAAAACGCATATGCTAGGGAGAGGTTTCCACATCCTTATAAAGAATGCTTCGTTCTCCACCCCAACCGATGTAGGATCTCACGTTGCATATTCTTTTCCCGGACTCCTATCATAGGTTTTAGGTCATCTCTTTTTCTTTCCTCATGGTTTATTCTTTCCACTGAACTAAAAAAGGGTTCATTCTTTCAATGCCTTACAACAAAGATAGGAAAGTTTCTAAATTGAATAATTAGCGACATTAGTATAATAACTGGACCCACTTTTTTTTTTTTTGCCTGAGACAAATTATTGGGGTTCAATTATCGAGTTTCCAAATCCGAATGCAATTTGTTTTCTGTTCTTTCGATCATCTTTGTTTCCTAACGACCAGAGCAAATTGTTAAAAGATTTCCCATATCTTAAATGACTTATGCATATGGATCTTTGCACAAGATTGCATTGTATTTCTGTTCTACAAGTACTTTTTATTCTGTTCCTTTGATTGCATAGGTGTTTTATTTCTCGGTTACAAATTTAGTCTCTGTTACTTTAACGTGCATGGGTGAAATGCAAATTCTTTTTCTAGCTCTTCATGGTAGAATAAATATCAAAAAGTGTATAATTCGTGATGAACATATATAGAGAGGTCAATAGTGTTACATTTATTGACGGTCCTAATTTGATACGTTATAAGTTATAGATTTGAATCTCTACTATTTTTCTTTACAGAATATTCTTTAAAAAATGATATTCGACTATATTTGATTGGTGTTTACCTAGGGAATAGCTGTTGTTGCCCTTTTGAGGCATTTTGGATGCTTTTGCTGGTAAGTCATCAAATTGGACCATTCATTTGCAAATTTGAAATTTTTGGTGAGTTGACAGTTGCTTGCTCTTGTTCTAGTTGGGAACTTGCTTCCACTTTAAAAGAATCCAAAGCAAGATTTGATTCATCTGGTGTTAAACTAATAGCCGTAGGCATTGGAACTCCGAATAAAGCACGTATCCTAGCTGAGCGGGTATCGATTTTCCTTATGTAAATTATCACTTTAATTGTCCATGGCTGCATCCTTTTCTCTATTAATGTCATTTCATTTTTTAAGATTTATCTAATAATTATTCGATTTAGATTAGATGCTCTAAATCAAAACACATCGAATTTGGATATTGTTTATAATATGAAGGATCTAATAACATCAATAAAACGTGGCTAAATTACAAGTTTGGTCTCACATCAATTAAACTTGTCTATTTAATTTCTGTACTTTATAGAGTTTTTCTAATAGGTTCATAACTTTTAAGATTGCATCAACCTCGTCTCTATATTTTAATAGTTTCTAATAAGTCATTGTTGTTAAGATGTTACTCTGCATTAGTTTCTAATGAGTTCTTTAATTTTTAAGTTTGTACGTAATGTAACGGCTCAAGCTTACCGCTAGCAAATATTGTCTTTTTGAATTTTTTCTTTCAAAGGTTTTAAAACGTGTCTACTAGGGAGAGGTTTTCACACCCTTATAAGAATGTTTCGTTCTCCTCCCTAACTGATGTGGGATCTCACATTTTTAAACTAATAAAGTAAACAATAAAGATTTATTAGGTTATTTTAAGATATTTGTAGACCTAGCTTATACATTATAAAAATTTCAACAATTATTGTATCTCTTTTGGTTTCTCTGTCCTGCCTTTCATGGTAATAACATTGCTTCTTAATTCTTCAAATTCCAGTTGCCTTTTCCAATGGATTGCCTTTACGCTGATCCTGATAGAAAGGTAATCCGATGCTACAAATGTCTATGCCATTATTACGTCTCTTTTTTCCTTTATTTTTTCGGAAAGGTTCCTTTTTTAGGCTACCCCGGAAACAAATCCAGTGGAGACGGGGTGGGGCCTGTAGCTCAGAGGATTAGAGCACGTGGCTACCAACCACGGTGTCAGAGGTTCGAATCCCTCCTCACCCACAACCAGCCAAAAAGGGAATGATTTTTCCCTCTGAGGTTAGGAAAATCATGATCGGGATAGCAGACCCAAAGCTATAGAACTTGGGTGTGGGTCTTCCGTTGAAATGGAATGGCCTAAGTTCAATAATCTGAAGTGGAGATCAGAGCATTTTACCTTTAAAATAAATGTGTCTTTTAACTTCATTAGGTGTTTTGATGTTTGTCACGCTAATCATAATATGTTCATGCAGGCATATGATTTACTAGGTTTATACTATGGCTTTGGTCGTACATTCTTTAATCCAGCTAGTGTAAACTTTCTCCTTCCATCTACTTTATGATCATTTAACAGAATTTATTTGCATGCTTTTTTTTTTTTAATTTTAATTTTTTCATCCCTCCGGTCGTCAATGTTTTTAGACTAAGGTATTTTCAAAGTCGAGATTTACGACCTTGCGAGAAGCCATGAAAAACTATACTCTTGAAGCTACCCCAGATGATAGAAGCAGCGTATTACAACAGGTTTTTTTCTTGTGTTTTGTTCATATGAAAAACACTTTTTTGATCTTCAGTTTGTGGAAACTTTTTCATATTTCATGTTTGTTTGATTAGGGAGGGATGCTTGTTTTCAAAGGCAAGCAACTGTTGTATGCTCGAAAAGATGAAGGTACCGGGGACCATGCTCCGTTAGATGAAATCTACGACGTCTGTTGTCGAGTCCTGACCTGAATCTTCACTCATAACGTGTGGATATTTGATTGGTACGTTGTTTCTTTTAATCTCTTAGCAAAGCATACCAGGAGAGAAAAAAATGTGCTGGTGTTGTAGATACTAAATCTTGATACTTTAATGCTCAATAGAGATATTCCAATGATATAAATTATATGAACATAGTATAAAATATAAATAAACATGAACTTAACTCGCCATTATTCACATATGATAGATTCAAATATCGGGTTAGAAAATGTAATCGAATGCAATATGGTTCATGATTAGTGCGACTAACTTTTCGTGATTGTTCCTTGAACTTTTATTTTTTCTTGTTTTTTTTTATTAGGATTGGATGCACAATACTACTCTACTCACAGTTCATGCATGTGCACATGAATCTAGTAGGTGGGCTCGTGTATGTACCTCTTAGGTCTGACTATGGGCTAATGCATGCTCACGCGTCGGAAGTCAATGAAAAGGAGTGCCTATAATATTGTGGTATACATGTTCGTATGTAACATACAAAATAAGTAATTCATGTTTGTGACATGATGTATGAGGTCCTATGTTTAAAATCATGGTAAAGTAAAATGACGCACATACTACTTCCGTACTTTTCATTACATGAATTTCGAATGAGATGTGCTTACATCTTGTGAATGTTTGATTAATC TGCCGTTATCCCAAGAAAAACGAACTGAACAACAACGCAGTTCCAGTTGGAGCGCTGATTCAGAGCAATGAATTTGGTTTCTGCGCGCACTCAAAATCCCCTTCGATGCGCTTCCCTTTCGATTTTACCCTCCTCCTTTAACCTCCCTTCCCACTTTCCCTCTCCTCTGCTTCTCAAGCCCTATGCTCCCGATTCCAAACTCTATTCTGCAAAACTAGCGACTACTAATGGCGACGGTCGTCGCAATTTCAGATCGCCTGTCGTTGTCAAGGCTTCAATAACTTCAGGCTACGGCCCAGAGATTGGAGAGAATCTGGGCGATGTTCGCATTTTTACTGCTGCTGGTGAGCCAGTTTTGTTCAAGGATCTCTGGGATCAGACTGAGGGAATAGCTGTTGTTGCCCTTTTGAGGCATTTTGGATGCTTTTGCTGTTGGGAACTTGCTTCCACTTTAAAAGAATCCAAAGCAAGATTTGATTCATCTGGTGTTAAACTAATAGCCGTAGGCATTGGAACTCCGAATAAAGCACGTATCCTAGCTGAGCGGTTGCCTTTTCCAATGGATTGCCTTTACGCTGATCCTGATAGAAAGGCATATGATTTACTAGGTTTATACTATGGCTTTGGTCGTACATTCTTTAATCCAGCTAGTACTAAGGTATTTTCAAAGTCGAGATTTACGACCTTGCGAGAAGCCATGAAAAACTATACTCTTGAAGCTACCCCAGATGATAGAAGCAGCGTATTACAACAGGGAGGGATGCTTGTTTTCAAAGGCAAGCAACTGTTGTATGCTCGAAAAGATGAAGGTACCGGGGACCATGCTCCGTTAGATGAAATCTACGACGTCTGTTGTCGAGTCCTGACCTGAATCTTCACTCATAACGTGTGGATATTTGATTGGATTGGATGCACAATACTACTCTACTCACAGTTCATGCATGTGCACATGAATCTAGTAGGTGGGCTCGTGTATGTACCTCTTAGGTCTGACTATGGGCTAATGCATGCTCACGCGTCGGAAGTCAATGAAAAGGAGTGCCTATAATATTGTGGTATACATGTTCGTATGTAACATACAAAATAAGTAATTCATGTTTGTGACATGATGTATGAGGTCCTATGTTTAAAATCATGGTAAAGTAAAATGACGCACATACTACTTCCGTACTTTTCATTACATGAATTTCGAATGAGATGTGCTTACATCTTGTGAATGTTTGATTAATC ATGAATTTGGTTTCTGCGCGCACTCAAAATCCCCTTCGATGCGCTTCCCTTTCGATTTTACCCTCCTCCTTTAACCTCCCTTCCCACTTTCCCTCTCCTCTGCTTCTCAAGCCCTATGCTCCCGATTCCAAACTCTATTCTGCAAAACTAGCGACTACTAATGGCGACGGTCGTCGCAATTTCAGATCGCCTGTCGTTGTCAAGGCTTCAATAACTTCAGGCTACGGCCCAGAGATTGGAGAGAATCTGGGCGATGTTCGCATTTTTACTGCTGCTGGTGAGCCAGTTTTGTTCAAGGATCTCTGGGATCAGACTGAGGGAATAGCTGTTGTTGCCCTTTTGAGGCATTTTGGATGCTTTTGCTGTTGGGAACTTGCTTCCACTTTAAAAGAATCCAAAGCAAGATTTGATTCATCTGGTGTTAAACTAATAGCCGTAGGCATTGGAACTCCGAATAAAGCACGTATCCTAGCTGAGCGGTTGCCTTTTCCAATGGATTGCCTTTACGCTGATCCTGATAGAAAGGCATATGATTTACTAGGTTTATACTATGGCTTTGGTCGTACATTCTTTAATCCAGCTAGTACTAAGGTATTTTCAAAGTCGAGATTTACGACCTTGCGAGAAGCCATGAAAAACTATACTCTTGAAGCTACCCCAGATGATAGAAGCAGCGTATTACAACAGGGAGGGATGCTTGTTTTCAAAGGCAAGCAACTGTTGTATGCTCGAAAAGATGAAGGTACCGGGGACCATGCTCCGTTAGATGAAATCTACGACGTCTGTTGTCGAGTCCTGACCTGA MNLVSARTQNPLRCASLSILPSSFNLPSHFPSPLLLKPYAPDSKLYSAKLATTNGDGRRNFRSPVVVKASITSGYGPEIGENLGDVRIFTAAGEPVLFKDLWDQTEGIAVVALLRHFGCFCCWELASTLKESKARFDSSGVKLIAVGIGTPNKARILAERLPFPMDCLYADPDRKAYDLLGLYYGFGRTFFNPASTKVFSKSRFTTLREAMKNYTLEATPDDRSSVLQQGGMLVFKGKQLLYARKDEGTGDHAPLDEIYDVCCRVLT Homology
BLAST of CmaCh13G002840 vs. ExPASy Swiss-Prot
Match: Q58CY6 (Prostamide/prostaglandin F synthase OS=Bos taurus OX=9913 GN=PRXL2B PE=2 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07 Identity = 54/171 (31.58%), Postives = 75/171 (43.86%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy Swiss-Prot
Match: A9CQL8 (Prostamide/prostaglandin F synthase OS=Sus scrofa OX=9823 GN=PRXL2B PE=1 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.3e-07 Identity = 55/177 (31.07%), Postives = 75/177 (42.37%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy Swiss-Prot
Match: Q5R7S9 (Prostamide/prostaglandin F synthase OS=Pongo abelii OX=9601 GN=PRXL2B PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.5e-06 Identity = 51/174 (29.31%), Postives = 73/174 (41.95%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy Swiss-Prot
Match: Q8TBF2 (Prostamide/prostaglandin F synthase OS=Homo sapiens OX=9606 GN=PRXL2B PE=1 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 9.3e-06 Identity = 51/174 (29.31%), Postives = 72/174 (41.38%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy Swiss-Prot
Match: Q9DB60 (Prostamide/prostaglandin F synthase OS=Mus musculus OX=10090 GN=Prxl2b PE=1 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05 Identity = 49/171 (28.65%), Postives = 72/171 (42.11%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy TrEMBL
Match: A0A6J1I579 (prostamide/prostaglandin F synthase OS=Cucurbita maxima OX=3661 GN=LOC111469330 PE=4 SV=1) HSP 1 Score: 548.9 bits (1413), Expect = 1.2e-152 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy TrEMBL
Match: A0A6J1ETX1 (prostamide/prostaglandin F synthase OS=Cucurbita moschata OX=3662 GN=LOC111436511 PE=4 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 9.6e-147 Identity = 258/267 (96.63%), Postives = 261/267 (97.75%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy TrEMBL
Match: A0A1S4E1M8 (prostamide/prostaglandin F synthase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497363 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.5e-119 Identity = 213/267 (79.78%), Postives = 230/267 (86.14%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy TrEMBL
Match: A0A5D3BK60 (Prostamide/prostaglandin F synthase isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00840 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 8.5e-119 Identity = 213/267 (79.78%), Postives = 230/267 (86.14%), Query Frame = 0
BLAST of CmaCh13G002840 vs. ExPASy TrEMBL
Match: A0A0A0LJF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G279270 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.2e-118 Identity = 214/265 (80.75%), Postives = 227/265 (85.66%), Query Frame = 0
BLAST of CmaCh13G002840 vs. NCBI nr
Match: XP_022970334.1 (prostamide/prostaglandin F synthase [Cucurbita maxima]) HSP 1 Score: 548.9 bits (1413), Expect = 2.4e-152 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of CmaCh13G002840 vs. NCBI nr
Match: XP_022930043.1 (prostamide/prostaglandin F synthase [Cucurbita moschata] >XP_022930044.1 prostamide/prostaglandin F synthase [Cucurbita moschata] >KAG7029857.1 Thioredoxin-like protein AAED1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 529.3 bits (1362), Expect = 2.0e-146 Identity = 258/267 (96.63%), Postives = 261/267 (97.75%), Query Frame = 0
BLAST of CmaCh13G002840 vs. NCBI nr
Match: XP_023519132.1 (prostamide/prostaglandin F synthase [Cucurbita pepo subsp. pepo] >XP_023519133.1 prostamide/prostaglandin F synthase [Cucurbita pepo subsp. pepo]) HSP 1 Score: 528.5 bits (1360), Expect = 3.4e-146 Identity = 258/267 (96.63%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of CmaCh13G002840 vs. NCBI nr
Match: KAG6583617.1 (Thioredoxin-like protein AAED1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 526.9 bits (1356), Expect = 9.9e-146 Identity = 257/267 (96.25%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of CmaCh13G002840 vs. NCBI nr
Match: XP_038902955.1 (prostamide/prostaglandin F synthase [Benincasa hispida]) HSP 1 Score: 447.2 bits (1149), Expect = 9.9e-122 Identity = 219/267 (82.02%), Postives = 238/267 (89.14%), Query Frame = 0
BLAST of CmaCh13G002840 vs. TAIR 10
Match: AT5G65840.1 (Thioredoxin superfamily protein ) HSP 1 Score: 318.9 bits (816), Expect = 3.8e-87 Identity = 163/269 (60.59%), Postives = 201/269 (74.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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