CmaCh13G002830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G002830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Ecdysone receptor
Location	Cma_Chr13: 2504737 .. 2505796 (-)
RNA-Seq Expression	CmaCh13G002830
Synteny	CmaCh13G002830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAGTCGATTCTCTTAGCCATTGAAACATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACAAAAAAACGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAGCCCCCTTTCTTGAGTTCTTCCAACCCATTAAGCCATATGATTCTCTGCAGATCTCAAAAGCTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTACTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCTAAATTTGAAGCTTTACAAAATCAAGAACAAGAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTCATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATATTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTGGAGTGCAGTAAGTTTCTGATTCTCTGATTTTACCATGAAAAAGCTTTAACTTTTTGATATTTACTGTCTTTTTCTATGATTTTGCAGAAGATAAGGTGTTTTCTGAAGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTACCTGGCTGTTTTTGTGATGATTATTAATTTTATGCATGTAATTGATGTTTAATCTTAAGGAAACCCTGATATACATAAAAACTTGGTTGGTTTGTTATTTGTATTGACTATCAATGCTTGGTTTGAACCTTCAATTCATACCACTCGCTTTTAGGAGTGTAACTTAAC

mRNA sequence

CAAAAAAGTCGATTCTCTTAGCCATTGAAACATATCAACTTTGAAACTTCACCATTTCTCAGATCAAACAAAAAAACGATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAGCCCCCTTTCTTGAGTTCTTCCAACCCATTAAGCCATATGATTCTCTGCAGATCTCAAAAGCTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTACTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCTAAATTTGAAGCTTTACAAAATCAAGAACAAGAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTCATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATATTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTGGAGTGCAAAGATAAGGTGTTTTCTGAAGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTACCTGGCTGTTTTTGTGATGATTATTAATTTTATGCATGTAATTGATGTTTAATCTTAAGGAAACCCTGATATACATAAAAACTTGGTTGGTTTGTTATTTGTATTGACTATCAATGCTTGGTTTGAACCTTCAATTCATACCACTCGCTTTTAGGAGTGTAACTTAAC

Coding sequence (CDS)

ATGCAGAAAATACAGAGTTTTCATCTTCTCCACTCTGTTCTGTTCTTCAATTTCTTCTTGTGTTCATCCAAAACTGACCCAATTTCTTGTGGTAAAATCCAAATTCAGCCCCCTTTCTTGAGTTCTTCCAACCCATTAAGCCATATGATTCTCTGCAGATCTCAAAAGCTATATTTCAGAACTTCAATAGGCCTTTTCCCCATCTCCCAAATCGATTACACCACCAAAACACTTATAATCTCTCATGTTACTTCTTCTTCAACCCATTTTGTGTCCCCTGCCCTTCTATCCTCAGGCCTTCCTTCTCCACCAAACCTCATAAACTCACTCCTCCTCTTCCACTGCTCAAACCCAACAAAACCCATCTCTCAAAACTGCCCTAAATTTGAAGCTTTACAAAATCAAGAACAAGAATCCCAGAAGCCATCTTGTTTGATCCTTGAAGATCTTGGAGATTTGAAGCAGAGCTTCCATCCAAATGACTTGAAATGCTCCAATTTCATAAGGGTTCATAGAAACTCCTCAGATTTTGGCCTCAGAAATGGGTATAAATTGGGGACTTCCATCTCTTTTGACATTCCTGATCATATTCCTAATCCGTGTAAGGAGTGTGAGAAGGCTGATGGGCATTGTGGAGTGGGGTTGAGATGCTTATGCCATGTTGTGGAGTGCAAAGATAAGGTGTTTTCTGAAGGTGGGATTGTGAGACCTGGCGGTAAATTTCTCCTTTCTTACCTGGCTGTTTTTGTGATGATTATTAATTTTATGCATGTAATTGATGTTTAA

Protein sequence

MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFRTSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTKPISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLLSYLAVFVMIINFMHVIDV

Homology

[Close]

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL
Match: A0A6J1I584 (uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332 PE=4 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 7.7e-149
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK 120
           TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK 120

Query: 121 PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR 180
           PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR
Sbjct: 121 PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR 180

Query: 181 NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240
           NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK
Sbjct: 181 NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240

Query: 241 FLLSYLAVFVMIINFMHVIDV 262
           FLLSYLAVFVMIINFMHVIDV
Sbjct: 241 FLLSYLAVFVMIINFMHVIDV 261

[Close]

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL
Match: A0A6J1EVX8 (uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC111436512 PE=4 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.1e-130
Identity = 238/257 (92.61%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSS+PLSHMILCRS KLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 120

Query: 121 KPIS---QNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSD 180
           KPIS   QNCPKFEAL    +ESQKPSCLILEDLGDLKQSF+PNDLKCSNFIRV+RNSSD
Sbjct: 121 KPISESFQNCPKFEAL----RESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSD 180

Query: 181 FGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 240
           FGLRNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR
Sbjct: 181 FGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 240

Query: 241 PGGKFLLSYLAVFVMII 254
           PGGKFLLS L VFVMII
Sbjct: 241 PGGKFLLSLLPVFVMII 253

[Close]

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL
Match: A0A1S3CG71 (uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.5e-107
Identity = 202/266 (75.94%), Postives = 227/266 (85.34%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQPPFLSSSN-----PLSHMILC 60
           MQK  SFHLL S LF NF L SS   + DP SCGK Q+QPPFLSSSN     PL+HMILC
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSCGKFQLQPPFLSSSNLNGPFPLNHMILC 60

Query: 61  RSQKLYFRTSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLL 120
           RSQKLYFRTSIG+FPIS+IDYTTKTLIIS+  SSS HFVSP+LLSSGLPSPP+LINSLLL
Sbjct: 61  RSQKLYFRTSIGVFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 120

Query: 121 FHCSNPTKPISQ---NCPKFEALQNQEQE--SQKPSCLILEDLGDLKQSFHPNDLKCSNF 180
           F+CSNPTKPI++   NCPK  ALQNQ++E  SQK SCLI EDLG L++SFHPNDLKCS+F
Sbjct: 121 FNCSNPTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCSHF 180

Query: 181 IRVHRNSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDK 240
            RV+RNSSD  L+NGYKLGTSISFDIPDH+PN C ECEK DGHCGVGLRC+CHV+ECKDK
Sbjct: 181 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECKDK 240

Query: 241 VFSEGGIVRPGGKFLLSYLAVFVMII 254
           VFS+GGIVRPGGK L+S +AVFV+II
Sbjct: 241 VFSKGGIVRPGGKILISLMAVFVVII 266

[Close]

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL
Match: A0A6J1DHE8 (uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020512 PE=4 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 1.2e-98
Identity = 191/262 (72.90%), Postives = 212/262 (80.92%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFL-----CSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQ 60
           MQKIQ+FHLL S+L  NFFL      S KTDP SCGK QIQPPFLSS  PL+HMILCRSQ
Sbjct: 1   MQKIQNFHLLQSLLPLNFFLFFGCSISQKTDPTSCGKFQIQPPFLSS--PLNHMILCRSQ 60

Query: 61  KLYFRTSIGLFPISQIDYTTKTLIISH----VTSSSTHFVSPALLSSGLPSPPNLINSLL 120
           KLYFRTSIGLFPIS IDY+T+TLIIS      +SSSTHFVSP+LLSSGLPSPP+L NSLL
Sbjct: 61  KLYFRTSIGLFPISSIDYSTRTLIISQFPSSYSSSSTHFVSPSLLSSGLPSPPDLTNSLL 120

Query: 121 LFHCSNPTKPISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVH 180
           LFHCSNPTKPIS++      L N    S K SCLIL+DL +L  SFHPND+ CS++ RV+
Sbjct: 121 LFHCSNPTKPISESAKTCTHLPN-FGASPKTSCLILDDLRNLNHSFHPNDMNCSHYTRVY 180

Query: 181 RNSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSE 240
           RNSSDF LRNGYKLGT+ISFDIPDH+PN C EC K  GHCGVGLRC+CHV+ECKDKVFSE
Sbjct: 181 RNSSDFELRNGYKLGTTISFDIPDHVPNLCNECGKPGGHCGVGLRCICHVLECKDKVFSE 240

Query: 241 GGIVRPGGKFLLSYLAVFVMII 254
           GGIV PGGKFLL  LAV VMI+
Sbjct: 241 GGIVSPGGKFLLYLLAVLVMIM 259

[Close]

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL
Match: A0A5A7TC69 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00470 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 2.8e-66
Identity = 144/261 (55.17%), Postives = 163/261 (62.45%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKL 60
           MQK  SFHLL S LF NF L SS   + DP SC                           
Sbjct: 1   MQKFLSFHLLQSFLFLNFCLGSSIPKENDPTSC--------------------------- 60

Query: 61  YFRTSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSN 120
                                                    GLPSPP+LINSLLLF+CSN
Sbjct: 61  -----------------------------------------GLPSPPHLINSLLLFNCSN 120

Query: 121 PTKPISQ---NCPKFEALQNQEQE--SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHR 180
           PTKPI++   NCPK  ALQNQ++E  SQK SCLI EDLG L++SFHPNDLKCS+F RV+R
Sbjct: 121 PTKPITESAHNCPKIVALQNQDEEQISQKVSCLIFEDLGKLQESFHPNDLKCSHFRRVYR 180

Query: 181 NSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEG 240
           NSSD  L+NGYKLGTSISFDIPDH+PN C ECEK DGHCGVGLRC+CHV+ECKDKVFS+G
Sbjct: 181 NSSDVELKNGYKLGTSISFDIPDHVPNLCHECEKPDGHCGVGLRCICHVLECKDKVFSKG 193

Query: 241 GIVRPGGKFLLSYLAVFVMII 254
           GIVRPGGK L+S +AVFV+II
Sbjct: 241 GIVRPGGKILISLMAVFVVII 193

[Close]

BLAST of CmaCh13G002830 vs. NCBI nr
Match: XP_022970339.1 (uncharacterized protein LOC111469332 [Cucurbita maxima])

HSP 1 Score: 536.2 bits (1380), Expect = 1.6e-148
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK 120
           TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPTK 120

Query: 121 PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR 180
           PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR
Sbjct: 121 PISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGLR 180

Query: 181 NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240
           NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK
Sbjct: 181 NGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGK 240

Query: 241 FLLSYLAVFVMIINFMHVIDV 262
           FLLSYLAVFVMIINFMHVIDV
Sbjct: 241 FLLSYLAVFVMIINFMHVIDV 261

[Close]

BLAST of CmaCh13G002830 vs. NCBI nr
Match: XP_023519853.1 (uncharacterized protein LOC111783183 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 495.4 bits (1274), Expect = 3.1e-136
Identity = 245/254 (96.46%), Postives = 248/254 (97.64%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSSNPLSHMILCRS KLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSNPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120

Query: 121 KPISQNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSDFGL 180
           KPISQNCPKFEALQNQEQ SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRV+RNSSDFGL
Sbjct: 121 KPISQNCPKFEALQNQEQ-SQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVYRNSSDFGL 180

Query: 181 RNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240
           RNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG
Sbjct: 181 RNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGG 240

Query: 241 KFLLSYLAVFVMII 254
           KFLLS L VFVMII
Sbjct: 241 KFLLSLLPVFVMII 253

[Close]

BLAST of CmaCh13G002830 vs. NCBI nr
Match: KAG7029858.1 (hypothetical protein SDJN02_08201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 474.9 bits (1221), Expect = 4.3e-130
Identity = 238/257 (92.61%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSS+PLSHMILCRS KLYFR
Sbjct: 6   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 65

Query: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 66  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 125

Query: 121 KPIS---QNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSD 180
           KPIS   QNCPKFEAL    +ESQKPSCLILEDLGDLKQSF+PNDLKCSNFIRV+RNSSD
Sbjct: 126 KPISESFQNCPKFEAL----RESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSD 185

Query: 181 FGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 240
           FGLRNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR
Sbjct: 186 FGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 245

Query: 241 PGGKFLLSYLAVFVMII 254
           PGGKFLLS L VFVMII
Sbjct: 246 PGGKFLLSLLPVFVMII 258

[Close]

BLAST of CmaCh13G002830 vs. NCBI nr
Match: XP_022930045.1 (uncharacterized protein LOC111436512 [Cucurbita moschata])

HSP 1 Score: 474.9 bits (1221), Expect = 4.3e-130
Identity = 238/257 (92.61%), Postives = 244/257 (94.94%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQPPFLSSSNPLSHMILCRSQKLYFR 60
           MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQ PFLSSS+PLSHMILCRS KLYFR
Sbjct: 1   MQKIQSFHLLHSVLFFNFFLCSSKTDPISCGKIQIQSPFLSSSSPLSHMILCRSHKLYFR 60

Query: 61  TSIGLFPISQIDYTTKTLIISHV-TSSSTHFVSPALLSSGLPSPPNLINSLLLFHCSNPT 120
           TSIGLFPISQIDYTTKTLIISHV +SSSTHFVSPALLSSGLPSPPNL NSLLLFHCSNPT
Sbjct: 61  TSIGLFPISQIDYTTKTLIISHVPSSSSTHFVSPALLSSGLPSPPNLTNSLLLFHCSNPT 120

Query: 121 KPIS---QNCPKFEALQNQEQESQKPSCLILEDLGDLKQSFHPNDLKCSNFIRVHRNSSD 180
           KPIS   QNCPKFEAL    +ESQKPSCLILEDLGDLKQSF+PNDLKCSNFIRV+RNSSD
Sbjct: 121 KPISESFQNCPKFEAL----RESQKPSCLILEDLGDLKQSFNPNDLKCSNFIRVYRNSSD 180

Query: 181 FGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 240
           FGLRNGYKLGTSISFDIPDH+PNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR
Sbjct: 181 FGLRNGYKLGTSISFDIPDHVPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVR 240

Query: 241 PGGKFLLSYLAVFVMII 254
           PGGKFLLS L VFVMII
Sbjct: 241 PGGKFLLSLLPVFVMII 253

[Close]

BLAST of CmaCh13G002830 vs. NCBI nr
Match: KAE8652799.1 (hypothetical protein Csa_022847 [Cucumis sativus])

HSP 1 Score: 416.4 bits (1069), Expect = 1.8e-112
Identity = 211/266 (79.32%), Postives = 232/266 (87.22%), Query Frame = 0


Query: 1   MQKIQSFHLLHSVLFFNFFLCSS---KTDPISCGKIQIQPPFLSSSN-----PLSHMILC 60
           MQKIQSFHLL S LF NF LCSS   + DP SCGK QIQPPFLSSSN     PL+H+ILC
Sbjct: 1   MQKIQSFHLLQSFLFLNFCLCSSISQENDPTSCGKFQIQPPFLSSSNLNGPFPLNHVILC 60

Query: 61  RSQKLYFRTSIGLFPISQIDYTTKTLIISHVTSSSTHFVSPALLSSGLPSPPNLINSLLL 120
           RSQKLYFRTSIGLFPIS+IDYTTKTLIIS+  SSS HFVSP+LLSSGLPSPP+LINSLLL
Sbjct: 61  RSQKLYFRTSIGLFPISKIDYTTKTLIISNFLSSSHHFVSPSLLSSGLPSPPHLINSLLL 120

Query: 121 FHCSNPTKPI---SQNCPKFEALQNQ--EQESQKPSCLILEDLGDLKQSFHPNDLKCSNF 180
           F+CSNPTKPI   +QNCPKFEALQNQ  EQ SQK SCLI EDLG L++SFHPNDLKCS+F
Sbjct: 121 FNCSNPTKPITESAQNCPKFEALQNQDEEQTSQKSSCLIFEDLGKLQESFHPNDLKCSHF 180

Query: 181 IRVHRNSSDFGLRNGYKLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDK 240
            RV+RNSSD  L+NGYKLGTSISFDIPDH+PNPC ECEK DGHCGVGLRC+CHV++CKDK
Sbjct: 181 RRVYRNSSDVELKNGYKLGTSISFDIPDHVPNPCHECEKPDGHCGVGLRCICHVLDCKDK 240

Query: 241 VFSEGGIVRPGGKFLLSYLAVFVMII 254
           VFS+GGIVRP GKFL+S LAVFV+II
Sbjct: 241 VFSKGGIVRPCGKFLISLLAVFVVII 266

[Close]

BLAST of CmaCh13G002830 vs. TAIR 10
Match: AT3G44716.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 2.2e-10
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = 0


Query: 184 KLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEG 233
           KL   +S ++  HIP+ C  CE+  G+CGV LRCLCH  ECK+KV + G
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFG 118

[Close]

BLAST of CmaCh13G002830 vs. TAIR 10
Match: AT3G44716.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 13 Blast hits to 13 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 63.5 bits (153), Expect = 2.8e-10
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0


Query: 184 KLGTSISFDIPDHIPNPCKECEKADGHCGVGLRCLCHVVECKDKVFSEGGIVRPGGKFLL 243
           KL   +S ++  HIP+ C  CE+  G+CGV LRCLCH  ECK+KV + G   R     L 
Sbjct: 70  KLRARVSMEVEGHIPDLCIACERPKGNCGVALRCLCHPKECKNKVINFGTKSRALSGNLQ 129

Query: 244 SYLAVFVMIINFM 257
             L + +++  F+
Sbjct: 130 QLLPLLLLLAMFL 142

The following BLAST results are available for this feature:

BLAST of CmaCh13G002830 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh13G002830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I584	7.7e-149	100.00	uncharacterized protein LOC111469332 OS=Cucurbita maxima OX=3661 GN=LOC111469332...	[more]
A0A6J1EVX8	2.1e-130	92.61	uncharacterized protein LOC111436512 OS=Cucurbita moschata OX=3662 GN=LOC1114365...	[more]
A0A1S3CG71	2.5e-107	75.94	uncharacterized protein LOC103500362 OS=Cucumis melo OX=3656 GN=LOC103500362 PE=...	[more]
A0A6J1DHE8	1.2e-98	72.90	uncharacterized protein LOC111020512 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7TC69	2.8e-66	55.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of CmaCh13G002830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022970339.1	1.6e-148	100.00	uncharacterized protein LOC111469332 [Cucurbita maxima]	[more]
XP_023519853.1	3.1e-136	96.46	uncharacterized protein LOC111783183 [Cucurbita pepo subsp. pepo]	[more]
KAG7029858.1	4.3e-130	92.61	hypothetical protein SDJN02_08201, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022930045.1	4.3e-130	92.61	uncharacterized protein LOC111436512 [Cucurbita moschata]	[more]
KAE8652799.1	1.8e-112	79.32	hypothetical protein Csa_022847 [Cucumis sativus]	[more]

BLAST of CmaCh13G002830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44716.2	2.2e-10	51.02	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G44716.1	2.8e-10	39.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33355:SF11	PROTEIN, PUTATIVE-RELATED	coord: 5..254
None	No IPR available	PANTHER	PTHR33355	WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED	coord: 5..254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G002830.1	CmaCh13G002830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane