CmaCh13G001920 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh13G001920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPentatricopeptide repeat-containing protein
LocationCma_Chr13: 1505699 .. 1506991 (+)
RNA-Seq ExpressionCmaCh13G001920
SyntenyCmaCh13G001920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCATATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATTGTTGTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGGGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCCCAATTTCAGCAGGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAACCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAATTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGCCTGTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGGTCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCATGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGGATGGCCATGA

mRNA sequence

ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCATATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATTGTTGTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGGGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCCCAATTTCAGCAGGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAACCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAATTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGCCTGTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGGTCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCATGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGGATGGCCATGA

Coding sequence (CDS)

ATGAATCTCCTCCTTCGCATTCGCATTCAGTTCTTGAGGAATTCCATTAACCAGCTCTGTAACTCGATTCCATCGAATCCATATTTCGTTTGTCTCAGAAGATTTTCATTTCATTCATTGTTGTTGAATACTGATCATGGTAACTTCAGCCATATTCTCCGTCTATCTCAAATCCAAAACTATCCAGCTCCCGTCCTCTCTTTTACGAAATTTTGTTTGAATTTCTACTCTAATAGGGCACCTTCAAGATCCTTTAGGAGGAGAGCGAGTAAGAGATTGAAATCCAGAATCAAACCTAAGCTGAACGAGGCCCAATTTCAGCAGGCAATTTCTCAAATCCCTCCAAGGTTTAACTCCGAAGAACTCTATAATGTCATTTCTGTTCAGGGAGATCCTTTGGTGTGCTTTGAACTGTTCAATTGGGCCTCCCAGCAGTCTCGTTTCAGACATGATGTTTCCACTTATGAGATTACAATTAAGAAGCTGGGTGAGGCGAAAATGTACGAAGAAATGGATAATGTTGTGAACCAGGTGCTTGCTGTTCCTTCTATTGGTTCTGAGACTCTTTACAATACTATGATATATTTTTTTACTGAGGCAAGGAAGTTGACTAGAGCTATCAATATATTTAAGCATATGCAGAACAACAGAAACTTGAATTGTAGGCCTTCAATTAGAACCTATAATCTGCTTTTTACTGCATTCTTGAGTCGGGGTCGTAATGCTTATATAAATCACATGTATATGGAGACTATTAGATGCCTGTTCAGACAGATGGTGAATGATGGCATTGAACCTGACATATTTACTTTAAATTGTATGATAAAGGGGTATGTGCTATCCCTTCATGTCAATGATGCTCTCAGGGTCTTCCACCAAATGGGTGTTGTTTATAGTAGCCTCCCAAATTCATTTTCCTATGATTATTTGATTCATGGGTTATGCGCGCAAGCGCGAACGGATAATGCGAGGGAGTTGTGCAATGAAATGAAGGAAAAGGGGTTTGTGCCAAGTAGTATATCATATAATTCAATTGTTAATGCTATGGCTCTCAATGGAGAGGTTGAAGAAGCAGTGAATTATTTGTGGGAGATGATTGGTAATAGAAGGTCTCCTGATTTTATTACATATAAGACGGTATTGGATGAACTGTGCAGGCAAGGGAGGGTTGGAGAAGCCACGAGTTTGTTGAGGGAAGTGCAGGAGAAGGAACTTGTGGATGGTCATACTTATAGGAAACTTCTCTATGTGCTTGAAGATGACTATGGAAATGTAAATGGTGGATGGCCATGA

Protein sequence

MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLEDDYGNVNGGWP
Homology
[Close]
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match: Q9ZUY1 (Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g27800 PE=3 SV=2)

HSP 1 Score: 456.4 bits (1173), Expect = 3.5e-127
Identity = 217/346 (62.72%), Postives = 275/346 (79.48%), Query Frame = 0 

Query: 76  YSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS   P+RS RRR S R KS  KP LN ++F + IS++PPRF  EEL + I+++ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AKMY+EMD++VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 196 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 255
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KGYVLSLHVNDALR+FHQM VVY   PNSF+YDYLIHGLC
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335

Query: 316 AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFI 375
           AQ RT NAREL +EMK KGFVP+  SYNS+VNA AL+GE+++AV  LWEMI N R  DFI
Sbjct: 336 AQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFI 395

Query: 376 TYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLEDD 422
           +Y+T++DE CR+G+  EAT LL  ++EK+LVD  +Y KL+ VL  D
Sbjct: 396 SYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441

[Close]
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match: Q9LSF5 (Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g25210 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.5e-48
Identity = 111/359 (30.92%), Postives = 192/359 (53.48%), Query Frame = 0 

Query: 59  QNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFN 118
           +N   P LS     L+   +   S      +  R+++R      E QF+  I  + P F 
Sbjct: 18  RNLSPPFLSTAVNHLSLSFSSVSSSPESHTSPSRIRTRTP---LETQFETWIQNLKPGFT 77

Query: 119 SEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQV 178
           + ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V
Sbjct: 78  NSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEV 137

Query: 179 LAVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLS 238
           +A     S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L 
Sbjct: 138 IAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLK 197

Query: 239 RGRNAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVV 298
           R     + ++Y+  +R L +QM ++G+ PD F LN +IK Y   L V++A+RVF +M  +
Sbjct: 198 RFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-AL 257

Query: 299 YSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEE 358
           Y S PN+++Y YL+ G+C + R         EM+ KG VP+   Y  ++ ++++   ++E
Sbjct: 258 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 317

Query: 359 AVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDG-HTYRKLL 416
           AV  +++M+ N  SPD +TY TVL ELCR GR  EA  ++ E ++++ V G   YR L+
Sbjct: 318 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match: Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 8.5e-25
Identity = 69/251 (27.49%), Postives = 127/251 (50.60%), Query Frame = 0 

Query: 151 DVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 210
           +V +Y I +    +    +E  NV+N++ A     +   +N +I  F +  ++  A+ IF
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482

Query: 211 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDGIEPDIFT 270
           + M       C+P + T+N L +          I H        L R M+++G+  +  T
Sbjct: 483 REMPRK---GCKPDVYTFNSLISGLCEVDE---IKHALW-----LLRDMISEGVVANTVT 542

Query: 271 LNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEM 330
            N +I  ++    + +A ++ ++M V   S  +  +Y+ LI GLC     D AR L  +M
Sbjct: 543 YNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 602

Query: 331 KEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRV 390
              G  PS+IS N ++N +  +G VEEAV +  EM+    +PD +T+ ++++ LCR GR+
Sbjct: 603 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 661

Query: 391 GEATSLLREVQ 402
            +  ++ R++Q
Sbjct: 663 EDGLTMFRKLQ 661

[Close]
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match: Q8LDU5 (Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g01400 PE=2 SV=2)

HSP 1 Score: 115.9 bits (289), Expect = 1.1e-24
Identity = 75/278 (26.98%), Postives = 143/278 (51.44%), Query Frame = 0 

Query: 125 VISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVV--NQVLAVP 184
           +I+ Q DPL+  E+F++ASQQ  FRH  S++ I I KLG  + +  +D+V+  ++    P
Sbjct: 57  LIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYP 116

Query: 185 SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNA 244
             G   ++  +I  + EA+   + ++ F  M      N  P  +  N +    +S     
Sbjct: 117 LTGE--IFTYLIKVYAEAKLPEKVLSTFYKM---LEFNFTPQPKHLNRILDVLVS----- 176

Query: 245 YINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSSLP 304
             +  Y++    LF+     G+ P+  + N +++ + L+  ++ A ++F +M +    +P
Sbjct: 177 --HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-LERDVVP 236

Query: 305 NSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYL 364
           +  SY  LI G C + + + A EL ++M  KGFVP  +SY +++N++    ++ EA   L
Sbjct: 237 DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLL 296

Query: 365 WEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREV 401
             M     +PD + Y T++   CR+ R  +A  +L ++
Sbjct: 297 CRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDM 321

[Close]
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 3.2e-24
Identity = 77/247 (31.17%), Postives = 120/247 (48.58%), Query Frame = 0 

Query: 159 IKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRN 218
           I KL EA+  E    ++ Q +   ++    +Y T+I  F +   +  A   F  M +   
Sbjct: 329 ICKLAEAE--EAFSEMIRQGILPDTV----VYTTLIDGFCKRGDIRAASKFFYEMHSR-- 388

Query: 219 LNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGY 278
            +  P + TY  + + F   G         M     LF +M   G+EPD  T   +I GY
Sbjct: 389 -DITPDVLTYTAIISGFCQIGD--------MVEAGKLFHEMFCKGLEPDSVTFTELINGY 448

Query: 279 VLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPS 338
             + H+ DA RV + M +     PN  +Y  LI GLC +   D+A EL +EM + G  P+
Sbjct: 449 CKAGHMKDAFRVHNHM-IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 508

Query: 339 SISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLR 398
             +YNSIVN +  +G +EEAV  + E      + D +TY T++D  C+ G + +A  +L+
Sbjct: 509 IFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 557

Query: 399 EVQEKEL 406
           E+  K L
Sbjct: 569 EMLGKGL 557

[Close]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match: A0A6J1I0J8 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111469407 PE=4 SV=1)

HSP 1 Score: 870.5 bits (2248), Expect = 2.8e-249
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS
Sbjct: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNGGWP 431
           DYGNVNGGWP
Sbjct: 421 DYGNVNGGWP 430

[Close]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match: A0A6J1HKI7 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111464950 PE=4 SV=1)

HSP 1 Score: 853.2 bits (2203), Expect = 4.7e-244
Identity = 421/430 (97.91%), Postives = 425/430 (98.84%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS  LNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCR+GRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNGGWP 431
           DYGNVNGGWP
Sbjct: 421 DYGNVNGGWP 430

[Close]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match: A0A6J1DY00 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111024542 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 7.5e-210
Identity = 370/426 (86.85%), Postives = 393/426 (92.25%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLL   RIQF R SIN L NS  SNP+FV LR FS HS LLN++HGN    L LSQI+N
Sbjct: 1   MNLL---RIQFSRISINHLRNSNLSNPHFVSLRTFSTHSSLLNSNHGNCRSFLLLSQIRN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
            P PV+SFTKF LNF+S+RAPSRSFRRRASKRLKS IKP L+E  FQ A+SQIPPRF+ E
Sbjct: 61  CPVPVVSFTKFRLNFFSSRAPSRSFRRRASKRLKSSIKPSLDETLFQAAVSQIPPRFSPE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           EL NVIS+Q DP+VCFELFNWASQQ RFRHDVSTYEITIKKLGEAKM+EEMD+VVNQVLA
Sbjct: 121 ELCNVISLQEDPMVCFELFNWASQQPRFRHDVSTYEITIKKLGEAKMFEEMDDVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLH+NDALR+FHQMGVVYSS
Sbjct: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHINDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQ RTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQGRTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRS DF+TY+TVLDE+CRQGRVGEAT+LLRE+QEK+LVDGHTYRKL YVLED
Sbjct: 361 YLWEMIGNRRSADFVTYRTVLDEMCRQGRVGEATNLLRELQEKDLVDGHTYRKLCYVLED 420

Query: 421 DYGNVN 427
           DYGN+N
Sbjct: 421 DYGNLN 423

[Close]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match: A0A1S3CJQ6 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cucumis melo OX=3656 GN=LOC103501729 PE=4 SV=1)

HSP 1 Score: 731.5 bits (1887), Expect = 2.1e-207
Identity = 367/428 (85.75%), Postives = 389/428 (90.89%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLL-NTDHGNFSHILRLSQIQ 60
           MN L RIRI F  NSIN L NS PS P+F+C RRFS HSL L NT H N +H LR+SQIQ
Sbjct: 1   MNPLFRIRIHFSTNSINHLFNSNPSYPHFICFRRFSIHSLSLNNTHHCNLTHFLRVSQIQ 60

Query: 61  NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNS 120
            YPAP LSFTKFCLNFYS  APSRSFRRRA+KRLK+ +KP L+EAQFQ A+S+IPPRF  
Sbjct: 61  TYPAPNLSFTKFCLNFYSKTAPSRSFRRRANKRLKASLKPTLDEAQFQLAVSKIPPRFTP 120

Query: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
           EEL NVIS+Q DPLVCFELFNWASQQ RF+HDVS+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELRNVISLQKDPLVCFELFNWASQQPRFKHDVSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           AV SIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVY 300
           RN YINH+YMETIRCLFRQMVN DGIEPDIF LNCMIKGYVLSLHVNDALR+FHQMGVVY
Sbjct: 241 RNTYINHVYMETIRCLFRQMVNDDGIEPDIFALNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
           S LPNS+SYDYLIHGL AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVE+A
Sbjct: 301 SCLPNSYSYDYLIHGLSAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEDA 360

Query: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
           VNYLWEMI +RRSPDFITYKTVLDELCR GRV EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDHRRSPDFITYKTVLDELCRLGRVVEATSLLRELQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNVN 427
           EDDYGN+N
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match: A0A0A0LS50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1)

HSP 1 Score: 721.8 bits (1862), Expect = 1.6e-204
Identity = 362/428 (84.58%), Postives = 386/428 (90.19%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLL-NTDHGNFSHILRLSQIQ 60
           MNLLLRIRI F  NSI+ L NS PS P+FVC RRFS HS  L NT H N  H LR+SQI 
Sbjct: 1   MNLLLRIRIHFSTNSIDHLFNSNPSYPHFVCFRRFSIHSWWLNNTHHYNLPHFLRVSQIH 60

Query: 61  NYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNS 120
            Y  P LSFT F L FYS  APSRSFR+RA+KRLKS +KPKL+E QFQ A+S+IPPRF S
Sbjct: 61  PYSGPNLSFTNFLLKFYSRAAPSRSFRKRANKRLKSSLKPKLDETQFQLAVSKIPPRFTS 120

Query: 121 EELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVL 180
           EEL NVIS+Q DPLVCFELFNWASQQ RFRHD S+YEITIKKLGEAKMYEEMD+VVNQ L
Sbjct: 121 EELCNVISLQRDPLVCFELFNWASQQPRFRHDDSSYEITIKKLGEAKMYEEMDHVVNQAL 180

Query: 181 AVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240
           AV SIGSETLYNTMIYFFTEARKLTRA+NIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG
Sbjct: 181 AVSSIGSETLYNTMIYFFTEARKLTRAVNIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRG 240

Query: 241 RNAYINHMYMETIRCLFRQMVN-DGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVY 300
           RN YINHMYMETIRCLFRQMVN DGIEPDIF+LNCMIKGYVLSLHVNDALR+FHQMGVVY
Sbjct: 241 RNTYINHMYMETIRCLFRQMVNDDGIEPDIFSLNCMIKGYVLSLHVNDALRIFHQMGVVY 300

Query: 301 SSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEA 360
           S LPNS+S+DYLIHGLCAQARTDNA+ELCNEMKEKGFVPSSISYNSIVNA+ALNGEVE+A
Sbjct: 301 SCLPNSYSFDYLIHGLCAQARTDNAKELCNEMKEKGFVPSSISYNSIVNALALNGEVEDA 360

Query: 361 VNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVL 420
           VNYLWEMI NRRSPDFITYKTVLDELCRQG+V EATSLLRE+QEK+LVDGHTYRKLLYVL
Sbjct: 361 VNYLWEMIDNRRSPDFITYKTVLDELCRQGKVVEATSLLRELQEKDLVDGHTYRKLLYVL 420

Query: 421 EDDYGNVN 427
           EDDYGN+N
Sbjct: 421 EDDYGNLN 428

[Close]
BLAST of CmaCh13G001920 vs. NCBI nr
Match: XP_022970418.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970419.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970420.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima] >XP_022970421.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 870.5 bits (2248), Expect = 5.9e-249
Identity = 430/430 (100.00%), Postives = 430/430 (100.00%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS
Sbjct: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNGGWP 431
           DYGNVNGGWP
Sbjct: 421 DYGNVNGGWP 430

[Close]
BLAST of CmaCh13G001920 vs. NCBI nr
Match: XP_022965006.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 853.2 bits (2203), Expect = 9.7e-244
Identity = 421/430 (97.91%), Postives = 425/430 (98.84%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS  LNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCR+GRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNGGWP 431
           DYGNVNGGWP
Sbjct: 421 DYGNVNGGWP 430

[Close]
BLAST of CmaCh13G001920 vs. NCBI nr
Match: XP_023519586.1 (pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519587.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo] >XP_023519588.1 pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 852.4 bits (2201), Expect = 1.6e-243
Identity = 420/430 (97.67%), Postives = 426/430 (99.07%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS LLNTDHGNFSHI RLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWLLNTDHGNFSHIFRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+N+NCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNVNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCR+GRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNGGWP 431
           DYGNV+GGWP
Sbjct: 421 DYGNVHGGWP 430

[Close]
BLAST of CmaCh13G001920 vs. NCBI nr
Match: KAG7019254.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 844.0 bits (2179), Expect = 5.9e-241
Identity = 418/427 (97.89%), Postives = 422/427 (98.83%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS  LNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCR+GRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGNVNG 428
           DYGNVNG
Sbjct: 421 DYGNVNG 427

[Close]
BLAST of CmaCh13G001920 vs. NCBI nr
Match: KAG6583499.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 837.4 bits (2162), Expect = 5.5e-239
Identity = 415/424 (97.88%), Postives = 419/424 (98.82%), Query Frame = 0 

Query: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPYFVCLRRFSFHSLLLNTDHGNFSHILRLSQIQN 60
           MNLLLRIRIQFLRNSINQLCNSIPSNP+FVCLRRFSFHS  LNTDHGNFSHILRLSQIQN
Sbjct: 1   MNLLLRIRIQFLRNSINQLCNSIPSNPHFVCLRRFSFHSWFLNTDHGNFSHILRLSQIQN 60

Query: 61  YPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSE 120
           YPAPVLSFTKFCLNFYSN APSRSFRRRASKRLKSRIKPKLNEAQFQ AISQIPPRFNSE
Sbjct: 61  YPAPVLSFTKFCLNFYSNSAPSRSFRRRASKRLKSRIKPKLNEAQFQHAISQIPPRFNSE 120

Query: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180
           ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA
Sbjct: 121 ELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLA 180

Query: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGR 240
           VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNN+NLNCRPSIRTYNLLFTAFLSRGR
Sbjct: 181 VPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNKNLNCRPSIRTYNLLFTAFLSRGR 240

Query: 241 NAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSS 300
           NAYIN MYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR+FHQMGVVYSS
Sbjct: 241 NAYINLMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRIFHQMGVVYSS 300

Query: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360
           LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN
Sbjct: 301 LPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVN 360

Query: 361 YLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420
           YLWEMIGNRRSPDFITYKTVLDELCR+GRVGEATSLLREVQEKELVDGHTYRKLLYVLED
Sbjct: 361 YLWEMIGNRRSPDFITYKTVLDELCRRGRVGEATSLLREVQEKELVDGHTYRKLLYVLED 420

Query: 421 DYGN 425
           DYGN
Sbjct: 421 DYGN 424

[Close]
BLAST of CmaCh13G001920 vs. TAIR 10
Match: AT2G27800.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 456.4 bits (1173), Expect = 2.5e-128
Identity = 217/346 (62.72%), Postives = 275/346 (79.48%), Query Frame = 0 

Query: 76  YSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS   P+RS RRR S R KS  KP LN ++F + IS++PPRF  EEL + I+++ DP +C
Sbjct: 96  YSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLC 155

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AKMY+EMD++VNQVL+V  IG+E LYN++I+
Sbjct: 156 FHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIF 215

Query: 196 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 255
           +FT+A KL RA+NIF+HM  ++NL CRP+IRTY++LF A L RG N+YINH+YMET+R L
Sbjct: 216 YFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSL 275

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KGYVLSLHVNDALR+FHQM VVY   PNSF+YDYLIHGLC
Sbjct: 276 FRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLC 335

Query: 316 AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFI 375
           AQ RT NAREL +EMK KGFVP+  SYNS+VNA AL+GE+++AV  LWEMI N R  DFI
Sbjct: 336 AQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFI 395

Query: 376 TYKTVLDELCRQGRVGEATSLLREVQEKELVDGHTYRKLLYVLEDD 422
           +Y+T++DE CR+G+  EAT LL  ++EK+LVD  +Y KL+ VL  D
Sbjct: 396 SYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKD 441

[Close]
BLAST of CmaCh13G001920 vs. TAIR 10
Match: AT5G27300.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 298.9 bits (764), Expect = 6.6e-81
Identity = 165/358 (46.09%), Postives = 213/358 (59.50%), Query Frame = 0 

Query: 50  SHILRLSQIQNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQA 109
           S  L  SQI+   A V   T+     YS   P+RS RRR S R KS  KP LNE++FQ+ 
Sbjct: 43  SSSLPQSQIEGRLASVSMCTQ-----YSTSVPTRSLRRRISSRKKSSTKPILNESKFQET 102

Query: 110 ISQIPPRFNSEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYE 169
           IS++PPRF  EEL + I+++ DP +CF LFNWASQQ RF H+  +Y I I+KLG AK   
Sbjct: 103 ISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAK--- 162

Query: 170 EMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYN 229
                                         + KL RA+NIF+HM N+RNL CRP++RTY+
Sbjct: 163 ------------------------------SGKLIRAVNIFRHMVNSRNLECRPTMRTYH 222

Query: 230 LLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALR 289
           +LF A L RG N++INH+YMET+R LFRQMV+ GIEPD+F LNC++KG            
Sbjct: 223 ILFKALLGRGNNSFINHLYMETVRSLFRQMVDSGIEPDVFALNCLVKG------------ 282

Query: 290 VFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAM 349
                                        RT N REL +EMK KGFVP+  SYNS+VNA 
Sbjct: 283 -----------------------------RTINTRELLSEMKGKGFVPNGKSYNSLVNAF 321

Query: 350 ALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVD 408
           AL+GE+++AV  LWEMI N R  DFI+Y+T++DE CR+G+  EAT LL  ++EK+LVD
Sbjct: 343 ALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVD 321

[Close]
BLAST of CmaCh13G001920 vs. TAIR 10
Match: AT5G27300.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.9e-80
Identity = 157/332 (47.29%), Postives = 203/332 (61.14%), Query Frame = 0 

Query: 76  YSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFNSEELYNVISVQGDPLVC 135
           YS   P+RS RRR S R KS  KP LNE++FQ+ IS++PPRF  EEL + I+++ DP +C
Sbjct: 89  YSTSVPTRSLRRRISSRKKSSTKPILNESKFQETISKLPPRFTPEELADAITLEEDPFLC 148

Query: 136 FELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIY 195
           F LFNWASQQ RF H+  +Y I I+KLG AK                             
Sbjct: 149 FHLFNWASQQPRFTHENCSYHIAIRKLGAAK----------------------------- 208

Query: 196 FFTEARKLTRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCL 255
               + KL RA+NIF+HM N+RNL CRP++RTY++LF A L RG N++INH+YMET+R L
Sbjct: 209 ----SGKLIRAVNIFRHMVNSRNLECRPTMRTYHILFKALLGRGNNSFINHLYMETVRSL 268

Query: 256 FRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLC 315
           FRQMV+ GIEPD+F LNC++KG                                      
Sbjct: 269 FRQMVDSGIEPDVFALNCLVKG-------------------------------------- 328

Query: 316 AQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFI 375
              RT N REL +EMK KGFVP+  SYNS+VNA AL+GE+++AV  LWEMI N R  DFI
Sbjct: 329 ---RTINTRELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFI 346

Query: 376 TYKTVLDELCRQGRVGEATSLLREVQEKELVD 408
           +Y+T++DE CR+G+  EAT LL  ++EK+LVD
Sbjct: 389 SYRTLVDESCRKGKYDEATRLLEMLREKQLVD 346

[Close]
BLAST of CmaCh13G001920 vs. TAIR 10
Match: AT3G25210.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 193.4 bits (490), Expect = 3.9e-49
Identity = 111/359 (30.92%), Postives = 192/359 (53.48%), Query Frame = 0 

Query: 59  QNYPAPVLSFTKFCLNFYSNRAPSRSFRRRASKRLKSRIKPKLNEAQFQQAISQIPPRFN 118
           +N   P LS     L+   +   S      +  R+++R      E QF+  I  + P F 
Sbjct: 18  RNLSPPFLSTAVNHLSLSFSSVSSSPESHTSPSRIRTRTP---LETQFETWIQNLKPGFT 77

Query: 119 SEELYNVISVQGDPLVCFELFNWASQQSRFRHDVSTYEITIKKLGEAKMYEEMDNVVNQV 178
           + ++   +  Q DP +  ++F W +QQ  ++H+   Y   IK+    K    ++ ++ +V
Sbjct: 78  NSDVVIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEV 137

Query: 179 LAVPSIGSETLYNTMIYFFTEARKL-TRAINIFKHMQNNRNLNCRPSIRTYNLLFTAFLS 238
           +A     S  LYN +I F    + L  RA +++  M   R+ + +P + TY LL ++ L 
Sbjct: 138 IAGACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKML--RSDDSKPDLETYTLLLSSLLK 197

Query: 239 RGRNAYINHMYMETIRCLFRQMVNDGIEPDIFTLNCMIKGYVLSLHVNDALRVFHQMGVV 298
           R     + ++Y+  +R L +QM ++G+ PD F LN +IK Y   L V++A+RVF +M  +
Sbjct: 198 RFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-AL 257

Query: 299 YSSLPNSFSYDYLIHGLCAQARTDNARELCNEMKEKGFVPSSISYNSIVNAMALNGEVEE 358
           Y S PN+++Y YL+ G+C + R         EM+ KG VP+   Y  ++ ++++   ++E
Sbjct: 258 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 317

Query: 359 AVNYLWEMIGNRRSPDFITYKTVLDELCRQGRVGEATSLLREVQEKELVDG-HTYRKLL 416
           AV  +++M+ N  SPD +TY TVL ELCR GR  EA  ++ E ++++ V G   YR L+
Sbjct: 318 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLM 370

[Close]
BLAST of CmaCh13G001920 vs. TAIR 10
Match: AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 116.3 bits (290), Expect = 6.0e-26
Identity = 69/251 (27.49%), Postives = 127/251 (50.60%), Query Frame = 0 

Query: 151 DVSTYEITIKKLGEAKMYEEMDNVVNQVLAVPSIGSETLYNTMIYFFTEARKLTRAINIF 210
           +V +Y I +    +    +E  NV+N++ A     +   +N +I  F +  ++  A+ IF
Sbjct: 423 NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF 482

Query: 211 KHMQNNRNLNCRPSIRTYNLLFTAFLSRGRNAYINHMYMETIRCLFRQMVNDGIEPDIFT 270
           + M       C+P + T+N L +          I H        L R M+++G+  +  T
Sbjct: 483 REMPRK---GCKPDVYTFNSLISGLCEVDE---IKHALW-----LLRDMISEGVVANTVT 542

Query: 271 LNCMIKGYVLSLHVNDALRVFHQMGVVYSSLPNSFSYDYLIHGLCAQARTDNARELCNEM 330
            N +I  ++    + +A ++ ++M V   S  +  +Y+ LI GLC     D AR L  +M
Sbjct: 543 YNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 602

Query: 331 KEKGFVPSSISYNSIVNAMALNGEVEEAVNYLWEMIGNRRSPDFITYKTVLDELCRQGRV 390
              G  PS+IS N ++N +  +G VEEAV +  EM+    +PD +T+ ++++ LCR GR+
Sbjct: 603 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 661

Query: 391 GEATSLLREVQ 402
            +  ++ R++Q
Sbjct: 663 EDGLTMFRKLQ 661

The following BLAST results are available for this feature:
BLAST of CmaCh13G001920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9ZUY13.5e-12762.72Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidop... [more]
Q9LSF55.5e-4830.92Pentatricopeptide repeat-containing protein At3g25210, mitochondrial OS=Arabidop... [more]
Q9FMF68.5e-2527.49Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... [more]
Q8LDU51.1e-2426.98Pentatricopeptide repeat-containing protein At4g01400, mitochondrial OS=Arabidop... [more]
Q0WVK73.2e-2431.17Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
BLAST of CmaCh13G001920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I0J82.8e-249100.00pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A6J1HKI74.7e-24497.91pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A6J1DY007.5e-21086.85pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Momordic... [more]
A0A1S3CJQ62.1e-20785.75pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like OS=Cuc... [more]
A0A0A0LS501.6e-20484.58Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G086930 PE=4 SV=1[more]
BLAST of CmaCh13G001920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022970418.15.9e-249100.00pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_022965006.19.7e-24497.91pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
XP_023519586.11.6e-24397.67pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Cucur... [more]
KAG7019254.15.9e-24197.89Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6583499.15.5e-23997.88Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
BLAST of CmaCh13G001920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G27800.12.5e-12862.72Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G27300.26.6e-8146.09pentatricopeptide (PPR) repeat-containing protein [more]
AT5G27300.11.9e-8047.29pentatricopeptide (PPR) repeat-containing protein [more]
AT3G25210.13.9e-4930.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G64320.16.0e-2627.49Pentatricopeptide repeat (PPR) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 331..407
e-value: 2.7E-15
score: 58.4
coord: 241..330
e-value: 8.0E-17
score: 63.4
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 88..240
e-value: 1.0E-15
score: 59.5
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 190..235
e-value: 1.9E-4
score: 21.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 302..350
e-value: 2.1E-10
score: 40.7
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 262..294
e-value: 2.0E-5
score: 24.2
coord: 371..399
e-value: 2.5E-7
score: 30.3
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 269..294
e-value: 9.6E-4
score: 17.2
coord: 375..405
e-value: 8.0E-4
score: 17.4
coord: 189..216
e-value: 0.0023
score: 16.0
coord: 305..338
e-value: 4.5E-7
score: 27.6
coord: 340..373
e-value: 0.0015
score: 16.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..407
score: 9.700809
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 9.525427
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 303..337
score: 11.871145
NoneNo IPR availablePANTHERPTHR47932ATPASE EXPRESSION PROTEIN 3coord: 69..426
NoneNo IPR availablePANTHERPTHR47932:SF23PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEINcoord: 69..426

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh13G001920.1CmaCh13G001920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051641 cellular localization
cellular_component GO:0031083 BLOC-1 complex
molecular_function GO:0005515 protein binding