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CmaCh13G001770 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTTCGCTAGCAAGATCGATCCGGTCAAGGCAAACTAAGCTGTGTGTAAATGAGAGATTTGTGGTGTTGTTTACTTGTGTTTTCAAGTCAATGAGGAATTGGCTTCAAAGGCTTTCTTTTTGGTTCTTTTTTCATGGCGTTTTGCAGAAGCAAGCTGCAATGTTCTTCCCAGTGGTGGATGAGTTCATTGTGTCCATTTGTGAGAAAGTTCATGTTATGAAGATTTGTGTTTTATAGAACAAATCACTCGTACGTTCGGTTATTCAATTAAACTACCAAAAATTTGAATCACAAAAAAACACTGATATTTAACAATCATAATGAAAGTCATCGTTTATTCTAAACCAATTTGGCAATTTAATTAGCATAATCGAATCCCATCGCAATCGAAAATGAAAGCGGGAGATCGAAAACTTCTAAAATTTTCAAATATCTCTTGAATTGTCAGAGAAAGAGATTGTGAAATTTTCATCTGGAAAAGCAATGCATGAAGATTACATCTGAAAATGATCTAAAATACTCAGAGAGTATCGTTTAGAAATCAGATCCAACAAACAGAAGCATGGTAACTTCAGAGTCTGAAACAAACAGTTTCTAATTAGACAAAAGAAGATTTCCAGCTGCAGAATAATCCATCAAACGAGAGATACGATTAGCTCGCTGCTGATCGAAATCAACGTTCAATGCTAACATAATCAGAAATAATATACAGTTTTTCTCCAGAATCAGAACCAGTTTCCACATTCAAACCACCGAAATCATTTAATCTCCAATATCCAAGCCCTAGATCCTAAAATCCCTAACCTCCAAAGCCGTAAAGAGTGCGACCTTGCCTCTTAAGCGCATAAACAACATCCATGGCGGTGACGGTCTTCCGGCGAGCGTGCTCGGTGTAGGTGACGGCATCGCGAATAACATTCTCGAGGAAAATCTTGAGAACGCCGCGAGTCTCCTCGTAGATCAGGCCGCTGATACGCTTTACGCCGCCTCGCCTGGCCAGACGCCGAATCGCCGGCTTAGTGATTCCTTGAATGTTATCTCTCAGAACCTTCCG ATGGTTTCGCTAGCAAGATCGATCCGGTCAAGGCAAACTAAGCTGTGTAAGCAAGCTGCAATGTTCTTCCCAGTGGTGGATGAGTTCATTGTGTCCATTTGTGAGAAAGTTCATATCCTAAAATCCCTAACCTCCAAAGCCGTAAAGAGTGCGACCTTGCCTCTTAAGCGCATAAACAACATCCATGGCGGTGACGGTCTTCCGGCGAGCGTGCTCGGTGTAGGTGACGGCATCGCGAATAACATTCTCGAGGAAAATCTTGAGAACGCCGCGAGTCTCCTCGTAGATCAGGCCGCTGATACGCTTTACGCCGCCTCGCCTGGCCAGACGCCGAATCGCCGGCTTAGTGATTCCTTGAATGTTATCTCTCAGAACCTTCCG ATGGTTTCGCTAGCAAGATCGATCCGGTCAAGGCAAACTAAGCTGTGTAAGCAAGCTGCAATGTTCTTCCCAGTGGTGGATGAGTTCATTGTGTCCATTTGTGAGAAAGTTCATATCCTAAAATCCCTAACCTCCAAAGCCGTAAAGAGTGCGACCTTGCCTCTTAAGCGCATAAACAACATCCATGGCGGTGACGGTCTTCCGGCGAGCGTGCTCGGTGTAGGTGACGGCATCGCGAATAACATTCTCGAGGAAAATCTTGAGAACGCCGCGAGTCTCCTCGTAGATCAGGCCGCTGATACGCTTTACGCCGCCTCGCCTGGCCAGACGCCGAATCGCCGGCTTAGTGATTCCTTGAATGTTATCTCTCAGAACCTTCCG MVSLARSIRSRQTKLCKQAAMFFPVVDEFIVSICEKVHILKSLTSKAVKSATLPLKRINNIHGGDGLPASVLGVGDGIANNILEENLENAASLLVDQAADTLYAASPGQTPNRRLSDSLNVISQNLP Homology
BLAST of CmaCh13G001770 vs. ExPASy TrEMBL
Match: A0A5A7R5M6 (Histone H4 OS=Striga asiatica OX=4170 GN=STAS_30195 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.6e-19 Identity = 50/87 (57.47%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of CmaCh13G001770 vs. ExPASy TrEMBL
Match: A0A0E0DSL3 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18 Identity = 47/83 (56.63%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of CmaCh13G001770 vs. ExPASy TrEMBL
Match: A0A0E0CUB3 (Uncharacterized protein OS=Oryza meridionalis OX=40149 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 2.4e-18 Identity = 48/82 (58.54%), Postives = 69/82 (84.15%), Query Frame = 0
BLAST of CmaCh13G001770 vs. ExPASy TrEMBL
Match: A0A453CQ49 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 47/83 (56.63%), Postives = 69/83 (83.13%), Query Frame = 0
BLAST of CmaCh13G001770 vs. ExPASy TrEMBL
Match: A0A7I8L0J0 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI8410_10014237 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18 Identity = 48/84 (57.14%), Postives = 70/84 (83.33%), Query Frame = 0
BLAST of CmaCh13G001770 vs. NCBI nr
Match: KAF7825438.1 (histone H4 [Senna tora]) HSP 1 Score: 108.2 bits (269), Expect = 5.2e-20 Identity = 56/90 (62.22%), Postives = 76/90 (84.44%), Query Frame = 0
BLAST of CmaCh13G001770 vs. NCBI nr
Match: KAG5127215.1 (hypothetical protein JHK82_028050 [Glycine max] >KAG5151827.1 hypothetical protein JHK84_028299 [Glycine max]) HSP 1 Score: 105.9 bits (263), Expect = 2.6e-19 Identity = 49/86 (56.98%), Postives = 65/86 (75.58%), Query Frame = 0
BLAST of CmaCh13G001770 vs. NCBI nr
Match: GER52712.1 (histone H4 [Striga asiatica]) HSP 1 Score: 104.4 bits (259), Expect = 7.5e-19 Identity = 50/87 (57.47%), Postives = 72/87 (82.76%), Query Frame = 0
BLAST of CmaCh13G001770 vs. NCBI nr
Match: KAG4948179.1 (hypothetical protein JHK86_041418 [Glycine max] >KAG5104389.1 hypothetical protein JHK82_041359 [Glycine max] >KAG5115513.1 hypothetical protein JHK84_041626 [Glycine max]) HSP 1 Score: 101.7 bits (252), Expect = 4.9e-18 Identity = 50/86 (58.14%), Postives = 69/86 (80.23%), Query Frame = 0
BLAST of CmaCh13G001770 vs. NCBI nr
Match: CAA7403559.1 (unnamed protein product [Spirodela intermedia]) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17 Identity = 48/84 (57.14%), Postives = 70/84 (83.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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