CmaCh13G001620 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G001620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Actin depolymerizing factor-like protein
Location	Cma_Chr13: 1223940 .. 1226628 (-)
RNA-Seq Expression	CmaCh13G001620
Synteny	CmaCh13G001620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATATCTCAAAAACATTTCGCGATTTCTTTTCTACCCATCTCACAGCTAAGATTGTTCTTCCTCTTCTTCTGTTTCTCTTCCTAGATCCTCTGATTCAATTTCCCTACTCAAGCTTCAGCCATGGTAAGCCGCTTTTTACTGATTCCTGTTCTTCTGCTGATTTCTACTTCATTTGTTTCTTGATTTTGTACTCGATTTCTTTTCTTTTTGCTTGATTTTGATCTCTGATGCTTGTGGATGTGCTTTTAGGATCTGCTTGCTGTGGATCTGTATTCTGTTCTTGTTTTGATCTAGATTGTTTGAGTTTTTTTGTCCGATTTGCCTTGGGATCGGATTTGGTTGATTTTAAATTTGTTTAGGATTGATTTCAGTATCATCGGAAGTACTTGGAGAGTAGTTGTGTTGATTGGATGTGATCGTGACTGATCTCTGATTACCGTGGTTTAGTAGCATCTCAAAATTGATCGTTTGTGTTTTAATCGGGCTGGGAGATGGGTTTCGGTGTCTTGTTGTGCTTGGTTCTGTGGATTTGGATGTTTTGGTGATTGAGATGATGCTTTGGTAGTTGGTGGAAAGATGGTGATACTTCGCGTATATCATCAAGATGGTAATCTTGTGAAGTGAATTGAGTGCGTGTATTACTGTTGATAATCCGGTACATGATAATTACTCGATAGGGGCCGTGTGCCTCCAAATGAGTCCCCAATAGACTCGTAGAAATAGAGGGAAGAATTGGGAATGAAATGGATTTTTGATATCTAATCATGATTATGCCCACTTTCAATTTTCAATATTGCATCAAATTTCGAAAGTTAATACTTCTCTCTTGAGAGTGAAAATGTAACGCTATAGCGAATAGGCTGTTGAACGCGACTCTTTGCGTGAAACACTTGCACTCTTTATTAATTGAGACTGCTTGGGCTTGGATTTCCTATGGATATTTATAGGCAACTACTCATTTATGCCAAAAACAACGAATGTTATCTCAATGATTGTGAGAATAGGCTCTAAAGAACCATGTGGAGATCATACTGGTAACCAAGCAGATATTATAAATATCCAACTCTAAGGGGAATTTTACTAAAAGTGATGAAGGGCAGTGTGAATTACTCATTCAGGCATTTGATTTTGCATACTTTTCAGAGCTTTGGCTCATTGCCGTTAATCTATATCTTCATTTTCTTACATTTTTTTCGTGCAGGCTAACGCGGCATCTGGTATGGCTGTACACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAAGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTAATGTTATGATAAATGAAAAAAGAAACAAATTCTGTGTTATTATCTGTTCCTCACTCGACCCGATCACCTATTTAAACTTCCATCACTAATCATCATTATTCTCTTTTCTTGTTGCAAAGGTCTCCCGACGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAAGAAGCCTCTTTGTTATGAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTGAATGTGCTTTGATTACATATTGGGTTGTTTTCTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTCCCCCCCCCCCACCACCTTATATTCTATGATTTATCGTGTGGAATTAATGCAATATCTCCTTATGTAACGCTACATGATTTTGGTCAGGATTTACATCTTTTATCATGCACAGCACATTTAAAGATAATGTTGACTTTTTTTTTTCTAGATCCAAGGATGCTTCTGAGCTGAATGGTTGCAATGTCAACGCTTTCTAGACGACACAGCAGCATAGGCTTTCTAACCGGGTTGACTCGATTCTCATTTGGTAGCTCCTCTCTTCTTTGGTTCTTGTTATCAATTCTTGAAGAATTTAGATGTCATTAACATTTTGCAACTGTGAGGTAGAAGAATCCAAGATATTCTAGGACTACAATAAAGATTGATCCATCTTCTTTAGGAGGTTATGATCTATTTGATATCTTTTTTTTCCTTTTTTGGGCATTAGGGTTTAACCATTTCTACAATATGCCTCTATTTTCCCAGCTTCTAGTGTTGGATTTGAAGGTTTATTCAGTTTGGCCAAGCTTCAAACATTTTTTAAAGGATCAAATAATGGAAGATGGGCTAAATTTTAGGTATGTATGTTTGAGAAGTGTACACATGGAAATCCAGGGGTTCAAATTGGCTTCCACATCTCTAACAAAGTTTAGGCTCGACCAATCTTCTACTTAGGAGACTACTCTATAACTGCCTTTTGTTAGGAATCACGAACCTCCACAATAGTATATGATATTGTCCACTTTGAGTATGAGCTTTCATGACTTCGCTTTTGGTTTTCCCAAAAAG

mRNA sequence

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATATCTCAAAAACATTTCGCGATTTCTTTTCTACCCATCTCACAGCTAAGATTGTTCTTCCTCTTCTTCTGTTTCTCTTCCTAGATCCTCTGATTCAATTTCCCTACTCAAGCTTCAGCCATGGCTAACGCGGCATCTGGTATGGCTGTACACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAAGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCCGACGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAAGAAGCCTCTTTGTTATGAACTTCTTGTGGTGTCTGTTTTACATTGTGAAATGATGTTATTGAATGTGCTTTGATTACATATTGGGTTGTTTTCTAAGTTTTGTCTTATAGAATTATGTCCATCTGGAACAATCTTCGGTCATTCCCCCCCCCCCACCACCTTATATTCTATGATTTATCGTGTGGAATTAATGCAATATCTCCTTATGTAACGCTACATGATTTTGGTCAGGATTTACATCTTTTATCATGCACAGCACATTTAAAGATAATGTTGACTTTTTTTTTTCTAGATCCAAGGATGCTTCTGAGCTGAATGGTTGCAATGTCAACGCTTTCTAGACGACACAGCAGCATAGGCTTTCTAACCGGGTTGACTCGATTCTCATTTGGTAGCTCCTCTCTTCTTTGGTTCTTGTTATCAATTCTTGAAGAATTTAGATGTCATTAACATTTTGCAACTGTGAGGTAGAAGAATCCAAGATATTCTAGGACTACAATAAAGATTGATCCATCTTCTTTAGGAGGTTATGATCTATTTGATATCTTTTTTTTCCTTTTTTGGGCATTAGGGTTTAACCATTTCTACAATATGCCTCTATTTTCCCAGCTTCTAGTGTTGGATTTGAAGGTTTATTCAGTTTGGCCAAGCTTCAAACATTTTTTAAAGGATCAAATAATGGAAGATGGGCTAAATTTTAGGTATGTATGTTTGAGAAGTGTACACATGGAAATCCAGGGGTTCAAATTGGCTTCCACATCTCTAACAAAGTTTAGGCTCGACCAATCTTCTACTTAGGAGACTACTCTATAACTGCCTTTTGTTAGGAATCACGAACCTCCACAATAGTATATGATATTGTCCACTTTGAGTATGAGCTTTCATGACTTCGCTTTTGGTTTTCCCAAAAAG

Coding sequence (CDS)

ATGGCTAACGCGGCATCTGGTATGGCTGTACACGATGACTGTAAGCTTAAGTTCTTGGAGTTGAAGACCAAGAGAACTTACAGATTCATTGTATATAAGATTGAAGAGAAGCAGAAGCAAGTCATTGTGGAAAAGGTTGGCGAGCCAGGTCAAAGCTATGAAGATTTCACAGCCTGCCTTCCTGCTGATGAATGCCGATATGCGGTTTATGATTTTGACTTTCTGACTAAAGAGAATGTTCAGAAGAGCAGAATTTTCTTCATTGCTTGGTCTCCCGACGTGTCGAAGGTAAGAAGCAAGATGATCTATGCAAGCTCAAAGGACAAGTTTAGAAGAGAATTGGATGGCATTCAAATTGAGCTGCAAGCTACTGACCCATCTGAAATGGATCTCGATGTTTTTAAGAGCCGTGCGAAATAA

Protein sequence

MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLPADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIELQATDPSEMDLDVFKSRAK

Homology

[Close]

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.6e-65
Identity = 119/138 (86.23%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELK KRTYRFI+YKIEEKQK+V+VEK+GEP +SYEDFTA L
Sbjct: 1   MANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDF+TKEN QKSRIFFIAWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQATDP+EM LDVF+SRA
Sbjct: 121 LQATDPTEMGLDVFRSRA 138

[Close]

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.3e-64
Identity = 116/138 (84.06%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQATDP+EMDLDVF+SRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 240.7 bits (613), Expect = 9.6e-63
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSR 138
           LQATDP+EMDLDV KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot
Match: Q9ZSK4 (Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.1e-62
Identity = 112/138 (81.16%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKF+ELKTKRT+RFI+YKIEE QKQVIVEK+GEPGQ++ED  A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQATDP+EMDLDVFKSRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

[Close]

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.2e-60
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEK+GEP +SYEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           P +ECRYAVYDFDF+T EN QKSRIFFIAW PD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQA DP+EM LDV +SRA
Sbjct: 121 LQACDPTEMGLDVIQSRA 138

[Close]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL
Match: A0A6J1HYW9 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL
Match: A0A6J1HNW0 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL
Match: A0A6J1DU41 (actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 4.2e-69
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVIVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL
Match: A0A6J1K8K8 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 PE=3 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 2.1e-68
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL
Match: A0A6J1GA03 (actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.7e-68
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. NCBI nr
Match: XP_022964654.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-depolymerizing factor 2-like [Cucurbita maxima] >XP_023519424.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >KAG6583469.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019224.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 278.9 bits (712), Expect = 2.4e-71
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. NCBI nr
Match: XP_022156171.1 (actin-depolymerizing factor 2 [Momordica charantia])

HSP 1 Score: 270.4 bits (690), Expect = 8.7e-69
Identity = 133/139 (95.68%), Postives = 137/139 (98.56%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYR+IVYKIEEKQKQVIVEK+GEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKLGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. NCBI nr
Match: XP_022997831.1 (actin-depolymerizing factor 2-like [Cucurbita maxima])

HSP 1 Score: 268.1 bits (684), Expect = 4.3e-68
Identity = 133/139 (95.68%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. NCBI nr
Match: XP_022948707.1 (actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-depolymerizing factor 2-like [Cucurbita pepo subsp. pepo] >XP_023523187.1 actin-depolymerizing factor 2-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023523188.1 actin-depolymerizing factor 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6607202.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7036888.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 267.7 bits (683), Expect = 5.6e-68
Identity = 132/139 (94.96%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHD+CKLKFLELKTKRTYR+IVYKIEEKQKQVIVEKVGEP QSYEDFTACL
Sbjct: 1   MANAASGMAVHDECKLKFLELKTKRTYRYIVYKIEEKQKQVIVEKVGEPSQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDFDFLTKENVQKSRIFFIAWSPD+SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDISKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDP+EM LDVF SRAK
Sbjct: 121 LQATDPTEMGLDVFNSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. NCBI nr
Match: XP_008457551.1 (PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depolymerizing factor-like protein [Cucumis melo subsp. melo] >KAA0033926.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa] >TYK02902.1 actin-depolymerizing factor 2 [Cucumis melo var. makuwa])

HSP 1 Score: 267.3 bits (682), Expect = 7.3e-68
Identity = 133/139 (95.68%), Postives = 135/139 (97.12%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQV VEKVGEPGQSYEDFTACL
Sbjct: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVTVEKVGEPGQSYEDFTACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYAVYDF+FLT+ NV KSRIFFIAWSPD SKVRSKMIYASSKDKFRRELDGIQIE
Sbjct: 61  PADECRYAVYDFEFLTEGNVPKSRIFFIAWSPDTSKVRSKMIYASSKDKFRRELDGIQIE 120

Query: 121 LQATDPSEMDLDVFKSRAK 140
           LQATDPSEMDLDVFKSRAK
Sbjct: 121 LQATDPSEMDLDVFKSRAK 139

[Close]

BLAST of CmaCh13G001620 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 246.9 bits (629), Expect = 9.5e-66
Identity = 116/138 (84.06%), Postives = 132/138 (95.65%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACL
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQATDP+EMDLDVF+SRA
Sbjct: 121 LQATDPTEMDLDVFRSRA 138

[Close]

BLAST of CmaCh13G001620 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 245.0 bits (624), Expect = 3.6e-65
Identity = 115/137 (83.94%), Postives = 131/137 (95.62%), Query Frame = 0


Query: 2   ANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLP 61
           ANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQV+VEKVG+P Q+YE+F ACLP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 62  ADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIEL 121
           ADECRYA+YDFDF+T EN QKS+IFFIAW PD++KVRSKMIYASSKD+F+RELDGIQ+EL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 122 QATDPSEMDLDVFKSRA 139
           QATDP+EMDLDVF+SRA
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]

BLAST of CmaCh13G001620 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 240.7 bits (613), Expect = 6.8e-64
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A L
Sbjct: 1   MANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSR 138
           LQATDP+EMDLDV KSR
Sbjct: 121 LQATDPTEMDLDVLKSR 137

[Close]

BLAST of CmaCh13G001620 vs. TAIR 10
Match: AT5G59880.1 (actin depolymerizing factor 3 )

HSP 1 Score: 239.6 bits (610), Expect = 1.5e-63
Identity = 112/138 (81.16%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 1   MANAASGMAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACL 60
           MANAASGMAVHDDCKLKF+ELKTKRT+RFI+YKIEE QKQVIVEK+GEPGQ++ED  A L
Sbjct: 1   MANAASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASL 60

Query: 61  PADECRYAVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIE 120
           PADECRYA++DFDF++ E V +SRIFF+AWSPD ++VRSKMIYASSKD+F+RELDGIQ+E
Sbjct: 61  PADECRYAIFDFDFVSSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDGIQVE 120

Query: 121 LQATDPSEMDLDVFKSRA 139
           LQATDP+EMDLDVFKSRA
Sbjct: 121 LQATDPTEMDLDVFKSRA 138

[Close]

BLAST of CmaCh13G001620 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 228.0 bits (580), Expect = 4.6e-60
Identity = 110/130 (84.62%), Postives = 121/130 (93.08%), Query Frame = 0


Query: 8   MAVHDDCKLKFLELKTKRTYRFIVYKIEEKQKQVIVEKVGEPGQSYEDFTACLPADECRY 67
           MAVHDDCKL+FLELK KRT+RFIVYKIEEKQKQVIVEKVGEP  +YEDF A LPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 68  AVYDFDFLTKENVQKSRIFFIAWSPDVSKVRSKMIYASSKDKFRRELDGIQIELQATDPS 127
           A+YDFDF+T EN QKS+IFFIAW PDV+KVRSKMIYASSKD+F+RELDGIQ+ELQATDP+
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 128 EMDLDVFKSR 138
           EMDLDV KSR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:

BLAST of CmaCh13G001620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FVI1	4.6e-65	86.23	Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1	[more]
Q39250	1.3e-64	84.06	Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1	[more]
Q9ZSK3	9.6e-63	85.40	Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2	[more]
Q9ZSK4	2.1e-62	81.16	Actin-depolymerizing factor 3 OS=Arabidopsis thaliana OX=3702 GN=ADF3 PE=1 SV=1	[more]
Q9FVI2	1.2e-60	81.16	Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1	[more]

BLAST of CmaCh13G001620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYW9	1.2e-71	100.00	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111469374 P...	[more]
A0A6J1HNW0	1.2e-71	100.00	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111464666...	[more]
A0A6J1DU41	4.2e-69	95.68	actin-depolymerizing factor 2 OS=Momordica charantia OX=3673 GN=LOC111023124 PE=...	[more]
A0A6J1K8K8	2.1e-68	95.68	actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111492671 P...	[more]
A0A6J1GA03	2.7e-68	94.96	actin-depolymerizing factor 2-like OS=Cucurbita moschata OX=3662 GN=LOC111452299...	[more]

BLAST of CmaCh13G001620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964654.1	2.4e-71	100.00	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_022970372.1 actin-de...	[more]
XP_022156171.1	8.7e-69	95.68	actin-depolymerizing factor 2 [Momordica charantia]	[more]
XP_022997831.1	4.3e-68	95.68	actin-depolymerizing factor 2-like [Cucurbita maxima]	[more]
XP_022948707.1	5.6e-68	94.96	actin-depolymerizing factor 2-like [Cucurbita moschata] >XP_023521573.1 actin-de...	[more]
XP_008457551.1	7.3e-68	95.68	PREDICTED: actin-depolymerizing factor 2 [Cucumis melo] >ADN34239.1 actin depoly...	[more]

BLAST of CmaCh13G001620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46010.1	9.5e-66	84.06	actin depolymerizing factor 1	[more]
AT3G46010.2	3.6e-65	83.94	actin depolymerizing factor 1	[more]
AT5G59890.1	6.8e-64	85.40	actin depolymerizing factor 4	[more]
AT5G59880.1	1.5e-63	81.16	actin depolymerizing factor 3	[more]
AT5G59890.2	4.6e-60	84.62	actin depolymerizing factor 4	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002108	Actin-depolymerising factor homology domain	SMART	SM00102	adf_2	coord: 12..139 e-value: 1.1E-58 score: 210.9
IPR002108	Actin-depolymerising factor homology domain	PFAM	PF00241	Cofilin_ADF	coord: 14..136 e-value: 4.6E-37 score: 126.6
IPR002108	Actin-depolymerising factor homology domain	PROSITE	PS51263	ADF_H	coord: 5..139 score: 37.663551
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10	Severin	coord: 1..139 e-value: 1.6E-52 score: 178.7
IPR017904	ADF/Cofilin	PANTHER	PTHR11913	COFILIN-RELATED	coord: 1..138
IPR017904	ADF/Cofilin	CDD	cd11286	ADF_cofilin_like	coord: 6..138 e-value: 2.18528E-64 score: 190.461
None	No IPR available	PANTHER	PTHR11913:SF74	ACTIN-DEPOLYMERIZING FACTOR 2-LIKE	coord: 1..138
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 3..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G001620.1	CmaCh13G001620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030042	actin filament depolymerization
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding