CmaCh13G001290 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G001290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	outer envelope pore protein 16, chloroplastic
Location	Cma_Chr13: 880699 .. 882591 (+)
RNA-Seq Expression	CmaCh13G001290
Synteny	CmaCh13G001290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAGTGGCGGGGTCGGAGGTGTCGCCTTGGGGCACGCAACAAAAAGGCCAAATCAACGGTGAACAGAAGAAAAATCCAAATTCAAGTACAAAATCACTCCCAACAAAATCAAACCATCTGGAGCGGCAAATTCCTTGTTCTGTAGCTTCAAGGATCCATTCAGCGCCATCCTCCACATTCAATCCCCTCGCTCTCACACAGTCTGTAGAACAACACCATGCCTCGCACCGGCTTCGTCGGTTCCTTATCCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAATCCCTTCCTCAACCTCACCGTTGATGGCTTCTTGAAGATCGGATCCGTATGTCTCTCTTTTTTTTTTTTTTTTTCTTAATTTTTCTTTCTGTTCTTCGTTTGCTCCGTCTATAATCTAAATGCGTTCTGTTCTGTTGCTTCTTTCAAGGTCGCGGCTACCCGAGCGGCTGCCGAGGATGCGTATCATGTCGTTAGAAAAGGTTTTGGTTGATGCGTATCATGTCGTTAGAAATTGGTTTCCTCCTTTTTATGCAGTGATTTATGGCGTTGTTTTGTTTTTTCAGGAACGATTTCTAGTCACAATTTTGAAAACACGGTTAGTGTCTCTTGCTTCGTGTCTCAATTTGTGGAGTCTGGTTGTTTATGGCTTTTGATTGCTGAAATTTTCATTCTGAGAATGTTCATAAAGTGCGTAATTAGGAAACAGATAGATTCTTTATGGTCTTTTGATCTATTCGCCTAATACATCTTAGCTTCTATTGCAGTTGAAGAAAATGTGTAAAGAAGGTGCATACTGGGGTAAGTATAGATCGCATTACTCCTCAATGAAGTACTTAGCTTAGTGGATGAGTTTCAGCATCTGTAAACCTCAGCCAATTTGATAAGATTTTGCATTTGGTTCATTGTTCTTGGAAGTTAAGCTTATGAGATTATAAAATCTGGCTATAATTTCAGAAACAATGGTGATATTTCATTTGAAAAGATGGGTAAAGGATTTTTTTATGTTTGGACGCAGGAACCGTGGCCGGAGTTTACGTCGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCAGAAGAGATTGGGTATGTTTTGCCATAAACTCAAAGTCATCTTTTAAATCAAGTTCAAGTAATTCTGTTAGATTTTGCTTCCAGTTCTCCGTGTTTATTTGGGAATATTTTCGAAGTTCTGTTTGATTTTCTGCCTCTCATCACTGTTCTGGATTGTTGGTTCACCTTGTAGAATGTATTGATCCTAGATTGGAGAAGAAAATGCAAACAACCCAGAAACAAAATTTCTCGAGATCCTAGATATATTATCAATGTTACTTACAATAGTCCTCTGATTAAAATGACTATATCTTTACAGCAAGAGAATCAATGTTTCTTTCTGGTTGTAGAACTGGGGTCTTAGTTGTCTGTATTATTTCAAACAAGAATTCCCCCTGTTACCAGATATTGTAATGCCCTAGAACACGAGTGACGTCATTGATGTTACATTGGGTCCTGAAAGGGGGTTGAATGTGAGAGAATGAAGCATTCTCTATAAGGGTGTGAAAACCTCTCCCTAGCAAACGCCTTTTAAAAACTTTGAGGGGAATCTCGAAGGGAAAGTCTAAAGAGGACAATATCGGCTAGCAGTAGTTTAGGCTTGAACTGTTACATGTAGTCTGCTATGGTTTCTAATTGGGCATATCACCAATAGGTTGTTTGTCTCGGGATCTAAATGTTTGAGCTTGTTTCAGAAAAATGCAATGATTGGAGGTGCTTTGACGGGGGCTATGGTATCGGCAGCAAGCAACAGCAACCGGGACAAAATCGTTATCGATGCAATTACAGGAGGGGCTGTTGCGACTGCAGCAGAGTTCATAAACTACCTTACTTGA

mRNA sequence

AAGAGTGGCGGGGTCGGAGGTGTCGCCTTGGGGCACGCAACAAAAAGGCCAAATCAACGGTGAACAGAAGAAAAATCCAAATTCAAGTACAAAATCACTCCCAACAAAATCAAACCATCTGGAGCGGCAAATTCCTTGTTCTGTAGCTTCAAGGATCCATTCAGCGCCATCCTCCACATTCAATCCCCTCGCTCTCACACAGTCTGTAGAACAACACCATGCCTCGCACCGGCTTCGTCGGTTCCTTATCCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAATCCCTTCCTCAACCTCACCGTTGATGGCTTCTTGAAGATCGGATCCGTCGCGGCTACCCGAGCGGCTGCCGAGGATGCGTATCATGTCGTTAGAAAAGGAACGATTTCTAGTCACAATTTTGAAAACACGTTGAAGAAAATGTGTAAAGAAGGTGCATACTGGGGAACCGTGGCCGGAGTTTACGTCGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCAGAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGGGCTATGGTATCGGCAGCAAGCAACAGCAACCGGGACAAAATCGTTATCGATGCAATTACAGGAGGGGCTGTTGCGACTGCAGCAGAGTTCATAAACTACCTTACTTGA

Coding sequence (CDS)

ATGCCTCGCACCGGCTTCGTCGGTTCCTTATCCACGCCCAAGGTCGACGTCGTCATCGACATGGGCAATCCCTTCCTCAACCTCACCGTTGATGGCTTCTTGAAGATCGGATCCGTCGCGGCTACCCGAGCGGCTGCCGAGGATGCGTATCATGTCGTTAGAAAAGGAACGATTTCTAGTCACAATTTTGAAAACACGTTGAAGAAAATGTGTAAAGAAGGTGCATACTGGGGAACCGTGGCCGGAGTTTACGTCGGTATGGAGTATGGGGTAGAAAGGATTCGCGGCAGAAGAGATTGGAAAAATGCAATGATTGGAGGTGCTTTGACGGGGGCTATGGTATCGGCAGCAAGCAACAGCAACCGGGACAAAATCGTTATCGATGCAATTACAGGAGGGGCTGTTGCGACTGCAGCAGAGTTCATAAACTACCTTACTTGA

Protein sequence

MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNSNRDKIVIDAITGGAVATAAEFINYLT

Homology

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BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot
Match: Q41050 (Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 4.9e-65
Identity = 116/146 (79.45%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPR+ F GSLS+PK+DVVIDMGNPFLNLTVDGFLKIG+VAATR+ AED +H++RKG+ISS
Sbjct: 1   MPRSSFSGSLSSPKLDVVIDMGNPFLNLTVDGFLKIGAVAATRSVAEDTFHIIRKGSISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           ++FE +LKKMCKEGAYWG +AGVYVGMEYGVERIRG RDWKNAM GGA+TGA+VSAASN+
Sbjct: 61  NDFEKSLKKMCKEGAYWGAIAGVYVGMEYGVERIRGTRDWKNAMFGGAVTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
            +DKI +DAITG A+ATAAEFINYLT
Sbjct: 121 KKDKIAVDAITGAAIATAAEFINYLT 146

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BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot
Match: Q9ZV24 (Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP161 PE=1 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-48
Identity = 87/143 (60.84%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MP + F G++STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
              E+ LKK+CKEG YWG   GVY+G EYG+ERIRG RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKIVIDAITGGAVATAAEFIN 144
            +D IVIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot
Match: Q0WMZ5 (Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP162 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.6e-15
Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT-------------------- 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                     
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  ------ISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GRRDWKNAMIGGALT 137
                  SS + +  +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--MVSAASNSNRDKIVIDAITGGAVATAAEFIN 144
           GA   ++ +  ++ +++V  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot
Match: Q9LZH8 (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=OEP164 PE=2 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.9e-06
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISSHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNSNRDKIV 127
           +GV+     G++R RG+ DW NA++GGA+ GA V A S  N  ++V
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAV-AISTRNWTQVV 111

[Close]

BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot
Match: O48528 (Outer envelope pore protein 16-3, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=OEP163 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.1e-04
Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 0


Query: 66  TLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNSNRDKI 125
           TLK M   G  +  + GVY+G+E  V+  R +RD+ N  IGG + GA V       R + 
Sbjct: 58  TLKMMGTHGLTFAAIGGVYIGVEQLVQNFRSKRDFYNGAIGGFVAGASVL----GYRARS 117

Query: 126 VIDAITGGA 135
           +  AI  GA
Sbjct: 118 IPTAIAAGA 122

[Close]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL
Match: A0A6J1HZI5 (outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111469516 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.3e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL
Match: A0A6J1HJY9 (outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464797 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 8.3e-76
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL
Match: A0A5D3BDN0 (Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002350 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.3e-72
Identity = 137/146 (93.84%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL
Match: A0A1S3C572 (outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497163 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.3e-72
Identity = 137/146 (93.84%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL
Match: A0A5N6R1E6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.0e-67
Identity = 124/146 (84.93%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPR+ F GS++TPKVDV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAYH V+KG+IS+
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFE+TLKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGA+TGA+VSAASN+
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           N+DK+V+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of CmaCh13G001290 vs. NCBI nr
Match: XP_022964801.1 (outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582.1 outer envelope pore protein 16, chloroplastic [Cucurbita maxima] >XP_023519566.1 outer envelope pore protein 16, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6583432.1 Outer envelope pore protein 16, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. NCBI nr
Match: XP_038893818.1 (outer envelope pore protein 16, chloroplastic [Benincasa hispida])

HSP 1 Score: 286.2 bits (731), Expect = 1.6e-73
Identity = 140/146 (95.89%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGF+GSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFIGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVER+RG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDKIVIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKIVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. NCBI nr
Match: XP_008457483.1 (PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ97413.1 outer envelope pore protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 8.8e-72
Identity = 137/146 (93.84%), Postives = 142/146 (97.26%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIS+
Sbjct: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFENTLKKMC EGAYWG VAG YVGMEYGVER+RG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HNFENTLKKMCTEGAYWGAVAGAYVGMEYGVERVRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. NCBI nr
Match: KAE8023298.1 (hypothetical protein FH972_009013 [Carpinus fangiana])

HSP 1 Score: 263.1 bits (671), Expect = 1.5e-66
Identity = 124/146 (84.93%), Postives = 140/146 (95.89%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MPR+ F GS++TPKVDV IDMGNPFLNLTVDGFLKIG+VAATRA AEDAYH V+KG+IS+
Sbjct: 1   MPRSRFSGSVTTPKVDVAIDMGNPFLNLTVDGFLKIGTVAATRAVAEDAYHAVKKGSIST 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           HNFE+TLKKMCKEGAYWGTVAGVYVGMEYGVERIRG RDWKNAMIGGA+TGA+VSAASN+
Sbjct: 61  HNFEHTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGTRDWKNAMIGGAVTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           N+DK+V+DAITGGA+ATAAEF+NYLT
Sbjct: 121 NKDKVVVDAITGGAIATAAEFLNYLT 146

[Close]

BLAST of CmaCh13G001290 vs. NCBI nr
Match: XP_011658142.1 (outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hypothetical protein Csa_019696 [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 1.9e-66
Identity = 130/146 (89.04%), Postives = 135/146 (92.47%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MP TGFVGS STPK+DVVID G PFLNLTVDGFLKIGSVAATRAAAEDAY VV+ G ISS
Sbjct: 1   MPPTGFVGSSSTPKIDVVIDTGYPFLNLTVDGFLKIGSVAATRAAAEDAYFVVKNGAISS 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
           H FENTLKKMCKEGAYWG VAG YVGMEYGVERIRG RDWKNAMIGGALTGA+VSAASN+
Sbjct: 61  HKFENTLKKMCKEGAYWGAVAGAYVGMEYGVERIRGTRDWKNAMIGGALTGALVSAASNN 120

Query: 121 NRDKIVIDAITGGAVATAAEFINYLT 147
           NRDK+VIDAITGGAVATAAEFINYLT
Sbjct: 121 NRDKVVIDAITGGAVATAAEFINYLT 146

[Close]

BLAST of CmaCh13G001290 vs. TAIR 10
Match: AT2G28900.1 (outer plastid envelope protein 16-1 )

HSP 1 Score: 193.7 bits (491), Expect = 1.0e-49
Identity = 87/143 (60.84%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 1   MPRTGFVGSLSTPKVDVVIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS 60
           MP + F G++STPK+ V +DMGNPFLNLTVD FLKIG+V  T++ AED Y  + KG++S 
Sbjct: 1   MPSSTFSGTVSTPKLSVAVDMGNPFLNLTVDAFLKIGAVGVTKSLAEDTYKAIDKGSLSK 60

Query: 61  HNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNS 120
              E+ LKK+CKEG YWG   GVY+G EYG+ERIRG RDWKNAM+ GA TGA++SA    
Sbjct: 61  STLEHALKKLCKEGVYWGAAGGVYIGTEYGIERIRGSRDWKNAMLAGAATGAVLSAVGKK 120

Query: 121 NRDKIVIDAITGGAVATAAEFIN 144
            +D IVIDAI GGA+ATA++F+N
Sbjct: 121 GKDTIVIDAILGGALATASQFVN 143

[Close]

BLAST of CmaCh13G001290 vs. TAIR 10
Match: AT4G16160.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 84.3 bits (207), Expect = 8.6e-17
Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGTISS-------------HNFE 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G  S+             H F 
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGFDSNNVGPPSEITGNKKHRFP 80

Query: 78  N-----------TLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GRRDWKNAMIGGALTGA 137
           N            +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GALTGA
Sbjct: 81  NLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALTGA 140

Query: 138 --MVSAASNSNRDKIVIDAITGGAVATAAEFIN 144
              ++ +  ++ +++V  A+TG A++TAA  ++
Sbjct: 141 AMAMTTSERTSHEQVVQSALTGAAISTAANLLS 173

[Close]

BLAST of CmaCh13G001290 vs. TAIR 10
Match: AT4G16160.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 82.4 bits (202), Expect = 3.3e-16
Identity = 47/155 (30.32%), Postives = 77/155 (49.68%), Query Frame = 0


Query: 18  VIDMGNPFLNLTVDGFLKIGSVAATRAAAEDAYHVVRKGT-------------------- 77
           + D+G+P LN   D F+K   V A +A + +AY  V  G                     
Sbjct: 21  LFDLGHPLLNRIADSFVKAAGVGALQAVSREAYFTVVDGAGFDSNNVGPPSEITGNKKHR 80

Query: 78  ------ISSHNFENTLKKMCKEGAYWGTVAGVYVGMEYGVERIR-GRRDWKNAMIGGALT 137
                  SS + +  +K   KE   WG  AG+Y G+ YG+  +R G  DW+N+ + GALT
Sbjct: 81  FPNLRGESSKSLDALVKNTGKESLQWGLAAGLYSGITYGMTEVRGGAHDWRNSAVAGALT 140

Query: 138 GA--MVSAASNSNRDKIVIDAITGGAVATAAEFIN 144
           GA   ++ +  ++ +++V  A+TG A++TAA  ++
Sbjct: 141 GAAMAMTTSERTSHEQVVQSALTGAAISTAANLLS 175

[Close]

BLAST of CmaCh13G001290 vs. TAIR 10
Match: AT3G62880.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISSHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNSNRDKIV 127
           +GV+     G++R RG+ DW NA++GGA+ GA V A S  N  ++V
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAV-AISTRNWTQVV 111

[Close]

BLAST of CmaCh13G001290 vs. TAIR 10
Match: AT3G62880.2 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 52.8 bits (125), Expect = 2.8e-07
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0


Query: 24  PFLNLTVDGFLKI---GSVAATRAAAEDAYHVVRKGTISSHNFENTLKKMCKEGAYWGTV 83
           P  +LTV+  L++   G +    A   DA  +   G +S  +F    K + + G   G V
Sbjct: 10  PCSSLTVESVLRVATAGGLYGLCAGPRDARKIGLSG-VSQASF--VAKSIGRFGFQCGLV 69

Query: 84  AGVYVGMEYGVERIRGRRDWKNAMIGGALTGAMVSAASNSNRDKIV 127
           +GV+     G++R RG+ DW NA++GGA+ GA V A S  N  ++V
Sbjct: 70  SGVFTMTHCGLQRYRGKNDWVNALVGGAVAGAAV-AISTRNWTQVV 111

The following BLAST results are available for this feature:

BLAST of CmaCh13G001290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q41050	4.9e-65	79.45	Outer envelope pore protein 16, chloroplastic OS=Pisum sativum OX=3888 GN=OEP16 ...	[more]
Q9ZV24	1.4e-48	60.84	Outer envelope pore protein 16-1, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q0WMZ5	4.6e-15	30.32	Outer envelope pore protein 16-2, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LZH8	3.9e-06	33.96	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
O48528	8.1e-04	37.68	Outer envelope pore protein 16-3, chloroplastic/mitochondrial OS=Arabidopsis tha...	[more]

BLAST of CmaCh13G001290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HZI5	8.3e-76	100.00	outer envelope pore protein 16, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1HJY9	8.3e-76	100.00	outer envelope pore protein 16, chloroplastic OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A5D3BDN0	4.3e-72	93.84	Outer envelope pore protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C572	4.3e-72	93.84	outer envelope pore protein 16, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5N6R1E6	7.0e-67	84.93	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_009013 PE=4 SV=1	[more]

BLAST of CmaCh13G001290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964801.1	1.7e-75	100.00	outer envelope pore protein 16, chloroplastic [Cucurbita moschata] >XP_022970582...	[more]
XP_038893818.1	1.6e-73	95.89	outer envelope pore protein 16, chloroplastic [Benincasa hispida]	[more]
XP_008457483.1	8.8e-72	93.84	PREDICTED: outer envelope pore protein 16, chloroplastic [Cucumis melo] >TYJ9741...	[more]
KAE8023298.1	1.5e-66	84.93	hypothetical protein FH972_009013 [Carpinus fangiana]	[more]
XP_011658142.1	1.9e-66	89.04	outer envelope pore protein 16, chloroplastic [Cucumis sativus] >KAE8653245.1 hy...	[more]

BLAST of CmaCh13G001290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28900.1	1.0e-49	60.84	outer plastid envelope protein 16-1	[more]
AT4G16160.1	8.6e-17	32.03	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT4G16160.2	3.3e-16	30.32	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.1	2.8e-07	33.96	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G62880.2	2.8e-07	33.96	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF02466	Tim17	coord: 56..135 e-value: 3.9E-12 score: 46.6
None	No IPR available	PANTHER	PTHR15371	TIM23	coord: 1..144
None	No IPR available	PANTHER	PTHR15371:SF2	OUTER ENVELOPE PORE PROTEIN 16-1, CHLOROPLASTIC	coord: 1..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G001290.1	CmaCh13G001290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0045037	protein import into chloroplast stroma
cellular_component	GO:0009707	chloroplast outer membrane
cellular_component	GO:0034426	etioplast membrane
cellular_component	GO:0046930	pore complex
molecular_function	GO:0015288	porin activity
molecular_function	GO:0042803	protein homodimerization activity