CmaCh13G000140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh13G000140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Epidermal patterning factor-like protein
Location	Cma_Chr13: 222823 .. 223523 (+)
RNA-Seq Expression	CmaCh13G000140
Synteny	CmaCh13G000140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTAATTTGAAAAGCATAGGAAGAAGGGATGAAGTTCAGTAGAACCAATGAACCTAAACCCTTCTTCTTCTTTATTTTCATTATCTTCATATTGTCCTCAGACAACACTAGGCGCTGCTCATTTGCTGAATCCGGCCATGCACATACTCAGGTAAATTTATTTTATTTCCAATATTATAATGGAGGATTCATCACCTTCCTCATATATTTTCTTACAAATATCTATCCTATTTTTGCACCCAAATCTAGGGTTCTAACTAAAAAAATCTGATGCATTATACTATGTCTAGCCCATCGCTAATCATGAAGATCAGGAGTTGACCTTGCCATTGGGTGGGTTGGGATCGTCGCCGCCAAACTGCGCCTCAAAGTGTGGGAGCTGCACACCCTGCACTACGGTTCTTGTGTCGGTGCCACCGGGACCTCCAGGCATCGATGATGATTTCCCCAAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGATCGGAAAAGGCATGCCCCCGGGGCATGTATGCTCTTATATGTTACTTATCGGCCGATGAGCCGAAGTAGACGGTGTTGGTCTGTTTCATTCATACCCCTATCATAAATCATGTATAGATTATTGGGTAAACAAAAAACACAATGATTATATACCCTATTTTATCATATATCTAAGTACAGATCGACTACCAAAAATCTATCAATAAC

mRNA sequence

ATTAATTTGAAAAGCATAGGAAGAAGGGATGAAGTTCAGTAGAACCAATGAACCTAAACCCTTCTTCTTCTTTATTTTCATTATCTTCATATTGTCCTCAGACAACACTAGGCGCTGCTCATTTGCTGAATCCGGCCATGCACATACTCAGCCCATCGCTAATCATGAAGATCAGGAGTTGACCTTGCCATTGGGTGGGTTGGGATCGTCGCCGCCAAACTGCGCCTCAAAGTGTGGGAGCTGCACACCCTGCACTACGGTTCTTGTGTCGGTGCCACCGGGACCTCCAGGCATCGATGATGATTTCCCCAAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGATCGGAAAAGGCATGCCCCCGGGGCATGTATGCTCTTATATGTTACTTATCGGCCGATGAGCCGAAGTAGACGGTGTTGGTCTGTTTCATTCATACCCCTATCATAAATCATGTATAGATTATTGGGTAAACAAAAAACACAATGATTATATACCCTATTTTATCATATATCTAAGTACAGATCGACTACCAAAAATCTATCAATAAC

Coding sequence (CDS)

ATGAAGTTCAGTAGAACCAATGAACCTAAACCCTTCTTCTTCTTTATTTTCATTATCTTCATATTGTCCTCAGACAACACTAGGCGCTGCTCATTTGCTGAATCCGGCCATGCACATACTCAGCCCATCGCTAATCATGAAGATCAGGAGTTGACCTTGCCATTGGGTGGGTTGGGATCGTCGCCGCCAAACTGCGCCTCAAAGTGTGGGAGCTGCACACCCTGCACTACGGTTCTTGTGTCGGTGCCACCGGGACCTCCAGGCATCGATGATGATTTCCCCAAAGTCTGGAGATGCAAATGTGGGAACAAGCTCTACATGCCCTGA

Protein sequence

MKFSRTNEPKPFFFFIFIIFILSSDNTRRCSFAESGHAHTQPIANHEDQELTLPLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP

Homology

[Close]

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 5.6e-18
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  EDQELTLPLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLY 106
           ++ EL   L GLGSSPP C+SKCG CTPC  V V VPPG P   + +P+ WRCKCGNKLY
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 154

Query: 107 MP 109
           MP
Sbjct: 155 MP 156

[Close]

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.1e-13
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 56  GGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           GG GSSPP C SKCG C PC  V V + PG     + +P+ WRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.0e-11
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 55  LGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           LGG GS PP C  KCG C PC  V V + PG     + +P+ WRCKCGNKL+MP
Sbjct: 54  LGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot
Match: P43212 (Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 7.1e-05
Identity = 22/51 (43.14%), Postives = 28/51 (54.90%), Query Frame = 0


Query: 58  LGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           LGS PPNC +KC  C+PC   LV V    P   + +P+ W C    K+Y P
Sbjct: 466 LGSRPPNCTNKCHGCSPCKAKLVIVHRIMP--QEYYPQRWMCSRHGKIYHP 514

[Close]

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot
Match: Q1G3V9 (EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EPFL8 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-04
Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 0


Query: 58  LGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDD----FPKVWRCKCGNKLYMP 109
           +GS PP CA+KC +C PC   L  +  G    DDD    +P  W C+C ++++ P
Sbjct: 46  MGSEPPVCATKCRNCKPCLPYLFDI-RGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

[Close]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL
Match: A0A0A0LXR9 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533610 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.5e-23
Identity = 65/119 (54.62%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 12  FFFFIFI-IFILS-------------SDNTRRCSFAESGHAHTQPIAN-----HEDQELT 71
           FFFF+F+ +FILS             SDNTR CSF +S       IAN     H+DQ + 
Sbjct: 29  FFFFLFLMVFILSSFCSSIMSSYNGDSDNTRSCSFGKS--VQYSIIANCEDDHHQDQFMR 88

Query: 72  LP---LGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           LP   LGG GSSPP CASKCG CTPCT V V VPPG P   + +P+ WRCKCGNKLYMP
Sbjct: 89  LPRRGLGGPGSSPPRCASKCGKCTPCTAVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 145

[Close]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL
Match: A0A5D3BE35 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G00580 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.5e-21
Identity = 55/90 (61.11%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 24  SDNTRRCSFAESGHAHTQPIANHEDQE--LTLP---LGGLGSSPPNCASKCGSCTPCTTV 83
           SDNTR CSF E+       IAN EDQ+  + LP   LGG GSSPP C SKCG CTPCT V
Sbjct: 20  SDNTRSCSFVEA--VQYPMIANCEDQDQFMRLPRRGLGGPGSSPPRCTSKCGKCTPCTAV 79

Query: 84  LVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
            V VPPG P   + +P+ WRCKCGNKLYMP
Sbjct: 80  HVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 107

[Close]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL
Match: A0A6J1KAS0 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 4.3e-21
Identity = 62/131 (47.33%), Postives = 73/131 (55.73%), Query Frame = 0


Query: 13  FFFIFIIFI------LSSDNTRRCSFAESGHAHTQPI----------------------- 72
           F F+F+I I      +SS + R CS A++GH + QPI                       
Sbjct: 20  FLFLFLILISFSCSMISSADNRCCSSAKAGHTNLQPITSSATWKLPADGRRVAQPNAAEV 79

Query: 73  --ANHEDQEL-TL---PLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVW 109
              +HEDQEL TL    LGG GSSPP CAS CG CTPCT V V VPPG P   + +P+ W
Sbjct: 80  VVGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPEAW 139

[Close]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL
Match: A0A6J1G964 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111452110 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20
Identity = 61/131 (46.56%), Postives = 72/131 (54.96%), Query Frame = 0


Query: 13  FFFIFIIFI------LSSDNTRRCSFAESGHAHTQPI----------------------- 72
           F F+F+I I      +SS + R CS A++GH + QPI                       
Sbjct: 22  FLFLFLILISFSCSMISSADNRCCSSAKAGHTNLQPITSSATWKLPADGRRVAQPATAEV 81

Query: 73  --ANHEDQEL-TL---PLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVW 109
              +HEDQEL TL    LGG GSSPP C S CG CTPCT V V VPPG P   + +P+ W
Sbjct: 82  VVGDHEDQELRTLARRELGGPGSSPPRCTSMCGKCTPCTAVHVPVPPGTPVTAEYYPEAW 141

[Close]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL
Match: A0A6J1KCE5 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111492606 PE=3 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.1e-20
Identity = 61/133 (45.86%), Postives = 71/133 (53.38%), Query Frame = 0


Query: 13  FFFIFIIFILSS--------DNTRRCSFAESGHAHTQPI--------------------- 72
           F F+F+I I  S         + R CS A++GH + QPI                     
Sbjct: 20  FLFLFLILISFSCSMISSAGPDNRCCSSAKAGHTNLQPITSSATWKLPADGRRVAQPNAA 79

Query: 73  ----ANHEDQEL-TL---PLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPK 109
                +HEDQEL TL    LGG GSSPP CAS CG CTPCT V V VPPG P   + +P+
Sbjct: 80  EVVVGDHEDQELRTLARRELGGPGSSPPRCASMCGKCTPCTAVHVPVPPGTPVTAEYYPE 139

[Close]

BLAST of CmaCh13G000140 vs. NCBI nr
Match: KAG6583645.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50
Identity = 95/112 (84.82%), Postives = 101/112 (90.18%), Query Frame = 0


Query: 1   MKFSRTNEPKPFFFFI-FIIFILSSDNTRRCSFAESGHAHTQPIANHEDQELTLP---LG 60
           MKF+RTNEPKP FFF+ FIIFILSSDNTRRCS  ESGHAH +PI NHEDQELTLP   LG
Sbjct: 1   MKFNRTNEPKPIFFFLFFIIFILSSDNTRRCSSTESGHAHIEPITNHEDQELTLPRRGLG 60

Query: 61  GLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           GLGSSPPNC SKCGSCTPCTT+LVSVPPGPPG+ DDFP+VWRCKCGNKLYMP
Sbjct: 61  GLGSSPPNCTSKCGSCTPCTTILVSVPPGPPGVGDDFPEVWRCKCGNKLYMP 112

[Close]

BLAST of CmaCh13G000140 vs. NCBI nr
Match: KAG6583315.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.0 bits (528), Expect = 4.1e-50
Identity = 97/112 (86.61%), Postives = 102/112 (91.07%), Query Frame = 0


Query: 1   MKFSRTNEPKPFFFFI-FIIFILSSDNTRRCSFAESGHAHTQPIANHEDQELTLP---LG 60
           MKF+R N+PKP FFF+ FIIFILSSDNTRRCS AESGHAHTQPIANHEDQELTLP   LG
Sbjct: 1   MKFNRNNDPKPIFFFLFFIIFILSSDNTRRCSSAESGHAHTQPIANHEDQELTLPRRGLG 60

Query: 61  GLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           G GSSPPNCASKCGSCTPCTTVLVSV PGPPGI DDFP+VWRCKCGNK+YMP
Sbjct: 61  GPGSSPPNCASKCGSCTPCTTVLVSVTPGPPGIGDDFPEVWRCKCGNKIYMP 112

[Close]

BLAST of CmaCh13G000140 vs. NCBI nr
Match: KAG6583317.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590332.1 EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 201.4 bits (511), Expect = 3.8e-48
Identity = 95/112 (84.82%), Postives = 99/112 (88.39%), Query Frame = 0


Query: 1   MKFSRTNEPKPFFFFI-FIIFILSSDNTRRCSFAESGHAHTQPIANHEDQELTLP---LG 60
           MKF+R NEPKP FFF+ FIIFILSSDNTRRCS AESGHAHTQPI+NHEDQELTL    L 
Sbjct: 1   MKFNRINEPKPIFFFLFFIIFILSSDNTRRCSSAESGHAHTQPISNHEDQELTLSGRGLS 60

Query: 61  GLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
            LGSSPPNC SKCGSCTPCTTVLVSVPPGP G+ DDFPKVWRCKCGNKLYMP
Sbjct: 61  RLGSSPPNCDSKCGSCTPCTTVLVSVPPGPSGVGDDFPKVWRCKCGNKLYMP 112

[Close]

BLAST of CmaCh13G000140 vs. NCBI nr
Match: KAG6583316.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590333.1 EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 198.4 bits (503), Expect = 3.2e-47
Identity = 94/112 (83.93%), Postives = 98/112 (87.50%), Query Frame = 0


Query: 1   MKFSRTNEPKPFFFFI-FIIFILSSDNTRRCSFAESGHAHTQPIANHEDQELTLP---LG 60
           MKF+R NEPKP FFF+ FIIFILSSDNTRRCS AESGHAHTQPI+NHEDQELTL    L 
Sbjct: 1   MKFNRINEPKPIFFFLFFIIFILSSDNTRRCSSAESGHAHTQPISNHEDQELTLSGRGLS 60

Query: 61  GLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
            LGSSPPNC SKCGSCTPCTTVLVSVP GP G+ DDFPKVWRCKCGNKLYMP
Sbjct: 61  RLGSSPPNCDSKCGSCTPCTTVLVSVPSGPSGVGDDFPKVWRCKCGNKLYMP 112

[Close]

BLAST of CmaCh13G000140 vs. NCBI nr
Match: KAG6583319.1 (EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 192.2 bits (487), Expect = 2.3e-45
Identity = 94/114 (82.46%), Postives = 98/114 (85.96%), Query Frame = 0


Query: 1   MKFSRTNEPKPFFFFI-FIIFILSSDNTRRCSFAE--SGHAHTQPIANHEDQELTLP--- 60
           MKF+R NEPKP FFF+ FIIFILSSDNTRRCS AE  SGHAHTQPI+N EDQELTL    
Sbjct: 1   MKFNRINEPKPIFFFLFFIIFILSSDNTRRCSSAESGSGHAHTQPISNLEDQELTLSRRG 60

Query: 61  LGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           L  LGSSPPNC SKCGSCTPCTTVLVSVPPGP G+ DDFPKVWRCKCGNKLYMP
Sbjct: 61  LSRLGSSPPNCDSKCGSCTPCTTVLVSVPPGPSGVGDDFPKVWRCKCGNKLYMP 114

[Close]

BLAST of CmaCh13G000140 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-19
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  EDQELTLPLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLY 106
           ++ EL   L GLGSSPP C+SKCG CTPC  V V VPPG P   + +P+ WRCKCGNKLY
Sbjct: 169 KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 228

Query: 107 MP 109
           MP
Sbjct: 229 MP 230

[Close]

BLAST of CmaCh13G000140 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 91.7 bits (226), Expect = 4.0e-19
Identity = 39/62 (62.90%), Postives = 45/62 (72.58%), Query Frame = 0


Query: 47  EDQELTLPLGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLY 106
           ++ EL   L GLGSSPP C+SKCG CTPC  V V VPPG P   + +P+ WRCKCGNKLY
Sbjct: 95  KEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 154

Query: 107 MP 109
           MP
Sbjct: 155 MP 156

[Close]

BLAST of CmaCh13G000140 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 74.7 bits (182), Expect = 5.0e-14
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0


Query: 56  GGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           GG GSSPP C SKCG C PC  V V + PG     + +P+ WRCKCGNKL+MP
Sbjct: 57  GGPGSSPPTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmaCh13G000140 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 70.9 bits (172), Expect = 7.3e-13
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0


Query: 55  LGGLGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDDFPKVWRCKCGNKLYMP 109
           LGG GS PP C  KCG C PC  V V + PG     + +P+ WRCKCGNKL+MP
Sbjct: 54  LGGPGSVPPMCRLKCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmaCh13G000140 vs. TAIR 10
Match: AT1G80133.1 (unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 8.6e-06
Identity = 21/55 (38.18%), Postives = 31/55 (56.36%), Query Frame = 0


Query: 58  LGSSPPNCASKCGSCTPCTTVLVSVPPGPPGIDDD----FPKVWRCKCGNKLYMP 109
           +GS PP CA+KC +C PC   L  +  G    DDD    +P  W C+C ++++ P
Sbjct: 46  MGSEPPVCATKCRNCKPCLPYLFDI-RGAHDDDDDSEPYYPVKWICRCRDRVFEP 99

The following BLAST results are available for this feature:

BLAST of CmaCh13G000140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1PEY6	5.6e-18	62.90	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	7.1e-13	58.49	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q9LUH9	1.0e-11	55.56	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
P43212	7.1e-05	43.14	Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1	[more]
Q1G3V9	1.2e-04	38.18	EPIDERMAL PATTERNING FACTOR-like protein 8 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of CmaCh13G000140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXR9	3.5e-23	54.62	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G533...	[more]
A0A5D3BE35	2.5e-21	61.11	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1KAS0	4.3e-21	47.33	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1G964	1.3e-20	46.56	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KCE5	8.1e-20	45.86	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]

BLAST of CmaCh13G000140 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583645.1	2.4e-50	84.82	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583315.1	4.1e-50	86.61	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583317.1	3.8e-48	84.82	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583316.1	3.2e-47	83.93	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]
KAG6583319.1	2.3e-45	82.46	EPIDERMAL PATTERNING FACTOR-like protein 6, partial [Cucurbita argyrosperma subs...	[more]

BLAST of CmaCh13G000140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G30370.1	4.0e-19	62.90	allergen-related	[more]
AT2G30370.2	4.0e-19	62.90	allergen-related	[more]
AT4G14723.1	5.0e-14	58.49	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT3G22820.1	7.3e-13	55.56	allergen-related	[more]
AT1G80133.1	8.6e-06	38.18	unknown protein; LOCATED IN: endomembrane system; Has 154 Blast hits to 154 prot...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 58..108 e-value: 6.7E-18 score: 64.4
None	No IPR available	PANTHER	PTHR33109:SF4	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 6	coord: 40..108
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 40..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh13G000140.1	CmaCh13G000140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0110165	cellular anatomical entity