CmaCh12G012800 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CACCAATAAATCACTAGAAATTTGGACATTCTGAAACGATATGTTCAAAAGAAAGAATGAATGAAGAAATAAGATGATTATCCTCTCAGTGTACAGATGCCACCTAACAGTCGCACCAAATTTGGGGAATGAATTTAGAATCGTTTCTGATAGAAAAGCTTCTTCTTCTTCTTCTTCTTCATTGACTATTCCGTTTCCATAATCTTCACATTCTGCGGATGATTCCATCGCACTTTTTTTCTCTCTCTTCTCAGATTGACTTACAGTGGACAGATTCTCTCTCGATCACTCTAATTTGGTCGATTCCTTAATCTGTGGTGTTCGATTTCTATTTCTATTTCCTTCGCTTTCCAATCGATTCCCCTTTCGCTCCAATTTTCTACCACCGTCATGTTCCTCCACCCTCTTTGACTCTCGTTTCCACAGAAATTGCGTGGAATTTGAGTTTTTTGATTTGATCATCTGGTATTGGGAATTGGTTGTTGAGATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATTGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTTTACCCTACCCTTTTCTACAACGTTCTTCGTAATAAAATGGAAGCCGAATTTAGATGGTGGGATGAAGTCGATCAGGTTTGATTTCTGCGTTCTTTTACTTGTATGCTCTTGATTTTGCTCCATTCTGATCAATCCATGAATGGATTGTTATGTTCTTGATTGGAGCTGTTTGACTTTCCGGACAAGAAAACTTTAGTCTGTATGATGGATTTGATTGTCTTCAGCCCTCGAGCCTCTACAGAATTCCGCTCGCCCCAGTCCTTAGTAGCATTGACAAAGGAGAACAGTCCCCTGTTGTTGATAGATAGAGAGCTTACCGTCACACCCCTATATCGTTGCGATTGTTGTCATAGAAAAAGAGTTTGTTTTCGGTAAAAAAGCATGCTTATAGTATAACCGTACTCTCTCTACAAGGACATAGGGAACGAGTTACCTATTCTTAATGGCCAAAGCGAACCCAAATCAAATCTAGGATTTGAACCTACAACCAATTGGTTAACCACCAACCACTCTACGACTGAGCTACTGAGCAACAACATTAAATTAGGTCTCATTCTCAACCCCTGACCAATATGAGCTCGAGGACATATATGATCTGTAGCTGGTAGTGATAGCGGAACGAGAGAATCACAAGAATTGTGGATTTGTTTGTATGTGATTATGTAGTTTTTGTTGTAGATTTGTGTCTGTTATTAATGTGAACGAATTTGTTCTTCCTTGCCAGTATCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATGTGAGTCCTGAGTTTGTTTGAATATCCATTTGATGCTTCAAAGTTGTACTAATTGAATGTTGTGCAGCGCCATGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAGACGTGCTGTGGACTTCATTCACAGTGAGCTACTTTCTTACCTCATTTCTTCCTCTGTTTCTTCCATTATGTGTGCTATACATGTTGTTTGTCTTTAGGAAATGCATCATCTGGTAAAACGACATACGTCCATTGTAAAGCAGGGCGAGGAAGGAGCACGACCGTTGTGCTTTGCTATTTGGTAATCTCATATGTACCCTTCTATGCAGAACCTCTGTATAGTAGTGAGTCGAGATTATGTTGATTTGCTTCTTTATTTTTCAGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTTGAGAAGACCACGCGTGTTGCTCGCCCCATCGCAGTGGGAGGTAAAAGAACTCCTCAAACTTAAAATTGTTTAGATCATAAGCTTGTGGAAAGCCATACAGTTTTTAGTCTGTTGATTGAGCAATTCAATAGCCAAGTCGTATTGTTCTCTGATAACGTAACGACTTAAGCCCACTGCTAGTAGATATTGTCTTCTTTGGGCTTTCCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGTGTCGACTAGGGAGAGGTTTTCACACTCTTACAAAGGGTGTTTCGTTCTCCTCCCCAATTGATGTGGGATCTCACAGACAAGCTTTGCCTCATCATGGGTTTCTTTTGTGGTATTACAACATGCAGGCTGTTCAAGAATACAGCAACTGTCGTCCAGCTACGAGTTCCAGCTCACCCTCAGGAGGAGATGCGGTGCTCATTACGAAAGACGATCTAG CACCAATAAATCACTAGAAATTTGGACATTCTGAAACGATATGTTCAAAAGAAAGAATGAATGAAGAAATAAGATGATTATCCTCTCAGTGTACAGATGCCACCTAACAGTCGCACCAAATTTGGGGAATGAATTTAGAATCGTTTCTGATAGAAAAGCTTCTTCTTCTTCTTCTTCTTCATTGACTATTCCGTTTCCATAATCTTCACATTCTGCGGATGATTCCATCGCACTTTTTTTCTCTCTCTTCTCAGATTGACTTACAGTGGACAGATTCTCTCTCGATCACTCTAATTTGGTCGATTCCTTAATCTGTGGTGTTCGATTTCTATTTCTATTTCCTTCGCTTTCCAATCGATTCCCCTTTCGCTCCAATTTTCTACCACCGTCATGTTCCTCCACCCTCTTTGACTCTCGTTTCCACAGAAATTGCGTGGAATTTGAGTTTTTTGATTTGATCATCTGGTATTGGGAATTGGTTGTTGAGATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATTGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTTTACCCTACCCTTTTCTACAACGTTCTTCGTAATAAAATGGAAGCCGAATTTAGATGGTGGGATGAAGTCGATCAGTATCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAGACGTGCTGTGGACTTCATTCACAGAAATGCATCATCTGGTAAAACGACATACGTCCATTGTAAAGCAGGGCGAGGAAGGAGCACGACCGTTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTTGAGAAGACCACGCGTGTTGCTCGCCCCATCGCAGTGGGAGAATACAGCAACTGTCGTCCAGCTACGAGTTCCAGCTCACCCTCAGGAGGAGATGCGGTGCTCATTACGAAAGACGATCTAG ATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATTGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTTTACCCTACCCTTTTCTACAACGTTCTTCGTAATAAAATGGAAGCCGAATTTAGATGGTGGGATGAAGTCGATCAGTATCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTCAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCATGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAGACGTGCTGTGGACTTCATTCACAGAAATGCATCATCTGGTAAAACGACATACGTCCATTGTAAAGCAGGGCGAGGAAGGAGCACGACCGTTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTTGAGAAGACCACGCGTGTTGCTCGCCCCATCGCAGTGGGAGAATACAGCAACTGTCGTCCAGCTACGAGTTCCAGCTCACCCTCAGGAGGAGATGCGGTGCTCATTACGAAAGACGATCTAG MKIVELEDAGTDREDEIGSGQIVKVDAKRALVGAGARILFYPTLFYNVLRNKMEAEFRWWDEVDQYLLLGAVPFPKHVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLQIPTRDYCFAPKFSDIRRAVDFIHRNASSGKTTYVHCKAGRGRSTTVVLCYLVKYKHMTPSAALEYVRLRRPRVLLAPSQWENTATVVQLRVPAHPQEEMRCSLRKTI Homology
BLAST of CmaCh12G012800 vs. ExPASy Swiss-Prot
Match: Q9ZQP1 (Phosphatidylglycerophosphate phosphatase PTPMT1 OS=Arabidopsis thaliana OX=3702 GN=PTPMT1 PE=1 SV=2) HSP 1 Score: 271.2 bits (692), Expect = 1.1e-71 Identity = 128/194 (65.98%), Postives = 153/194 (78.87%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy Swiss-Prot
Match: Q6NKR2 (Phosphatidylglycerophosphate phosphatase PTPMT2 OS=Arabidopsis thaliana OX=3702 GN=PTPMT2 PE=1 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 4.9e-69 Identity = 125/180 (69.44%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy Swiss-Prot
Match: P0C089 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Rattus norvegicus OX=10116 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 9.7e-25 Identity = 69/176 (39.20%), Postives = 100/176 (56.82%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy Swiss-Prot
Match: Q86BN8 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Drosophila melanogaster OX=7227 GN=PTPMT1 PE=2 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-24 Identity = 65/179 (36.31%), Postives = 98/179 (54.75%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy Swiss-Prot
Match: Q66GT5 (Phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 OS=Mus musculus OX=10090 GN=Ptpmt1 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24 Identity = 66/176 (37.50%), Postives = 97/176 (55.11%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy TrEMBL
Match: A0A6J1HPZ6 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita maxima OX=3661 GN=LOC111465628 PE=3 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 2.3e-109 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy TrEMBL
Match: A0A6J1FG65 (putative dual specificity protein phosphatase DSP8 OS=Cucurbita moschata OX=3662 GN=LOC111443887 PE=3 SV=1) HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107 Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy TrEMBL
Match: A0A5D3CKK3 (Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00720 PE=3 SV=1) HSP 1 Score: 381.3 bits (978), Expect = 2.7e-102 Identity = 185/196 (94.39%), Postives = 190/196 (96.94%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy TrEMBL
Match: A0A0A0LIP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G000700 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101 Identity = 183/196 (93.37%), Postives = 190/196 (96.94%), Query Frame = 0
BLAST of CmaCh12G012800 vs. ExPASy TrEMBL
Match: A0A1S3CAJ4 (putative dual specificity protein phosphatase DSP8 OS=Cucumis melo OX=3656 GN=LOC103498285 PE=3 SV=1) HSP 1 Score: 378.6 bits (971), Expect = 1.7e-101 Identity = 184/196 (93.88%), Postives = 189/196 (96.43%), Query Frame = 0
BLAST of CmaCh12G012800 vs. NCBI nr
Match: XP_022965875.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita maxima]) HSP 1 Score: 404.8 bits (1039), Expect = 4.7e-109 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of CmaCh12G012800 vs. NCBI nr
Match: KAG7021313.1 (putative dual specificity protein phosphatase DSP8, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107 Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of CmaCh12G012800 vs. NCBI nr
Match: KAG6586459.1 (putative dual specificity protein phosphatase DSP8, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 399.4 bits (1025), Expect = 2.0e-107 Identity = 191/195 (97.95%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of CmaCh12G012800 vs. NCBI nr
Match: XP_022937493.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita moschata]) HSP 1 Score: 398.3 bits (1022), Expect = 4.4e-107 Identity = 190/195 (97.44%), Postives = 194/195 (99.49%), Query Frame = 0
BLAST of CmaCh12G012800 vs. NCBI nr
Match: XP_023537023.1 (putative dual specificity protein phosphatase DSP8 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 397.9 bits (1021), Expect = 5.7e-107 Identity = 190/195 (97.44%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of CmaCh12G012800 vs. TAIR 10
Match: AT2G35680.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 271.2 bits (692), Expect = 7.5e-73 Identity = 128/194 (65.98%), Postives = 153/194 (78.87%), Query Frame = 0
BLAST of CmaCh12G012800 vs. TAIR 10
Match: AT5G56610.1 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 262.3 bits (669), Expect = 3.5e-70 Identity = 125/180 (69.44%), Postives = 149/180 (82.78%), Query Frame = 0
BLAST of CmaCh12G012800 vs. TAIR 10
Match: AT5G56610.2 (Phosphotyrosine protein phosphatases superfamily protein ) HSP 1 Score: 169.9 bits (429), Expect = 2.4e-42 Identity = 91/180 (50.56%), Postives = 112/180 (62.22%), Query Frame = 0
BLAST of CmaCh12G012800 vs. TAIR 10
Match: AT3G23610.1 (dual specificity protein phosphatase 1 ) HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08 Identity = 35/123 (28.46%), Postives = 59/123 (47.97%), Query Frame = 0
BLAST of CmaCh12G012800 vs. TAIR 10
Match: AT3G23610.2 (dual specificity protein phosphatase 1 ) HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08 Identity = 35/123 (28.46%), Postives = 59/123 (47.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|