CmaCh12G012020 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G012020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	axial regulator YABBY 5-like
Location	Cma_Chr12: 9427635 .. 9431144 (+)
RNA-Seq Expression	CmaCh12G012020
Synteny	CmaCh12G012020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGAAGTTTCACTGTTTTGATACATTGAAACCAGAAGAAGAACATAAAGCATCTATCTTCTTGCTCTTTTTCTCATTTCATTTGGAGGGTTTTCTCATTTAATCTCCATTCACTTCTAAAACCTTCATTTTTTTGTTCTTTTTCTTCTAAGCTCAAGCATGTCAAGCTGCATCAACAGTGCACAGGAGCAACTCTGCTATATTCCCTGCAATTTTTGCAATATTGTTCTTGCGGTATATAGTTTCATCCACTCCAAATTGGTGTCTAATTCATTCGTTTTTGATATAAAGATCTGGTTTTTTCCCCTATCTCTTGAAGTTTTCAGATATACATCACTTGCTTTGAAGAGAGAGAACCTAAAAGACCATTCCTTTGCATTTTTATTGGATTTGTTGTGTAATTTTGCTTTGTGGGTTTGTTTTTTTCCTTCTAATTTTGCTGCTAAAGCATGGCCATTCTAGAGAGAGAGAGTTCTTTTGATCCCTAAAAGGGCATTCCTTGCTTCTCTAAGAGTATTCTTTTCTTCTAATTTTGCACCCATTCCCAAGATCGGTTCCAACTTTACTAATACCTTATCCTTAATTAGTTTAGTTAGGTTTAAATTGGTCAAGAGGGTTTCGAGCATCGAAGTTCTAAAGTATATTTGTTATGTTCAAATTGGTCAAGAGGGTTTCAAGGATCGAAGTTCTTGAGTAAATTTCTAAATTGGTCAAGAGGGTTTCAAGCATCGAAGCATCAAAGTTCTAGAGTAAATTTCCAAATTGGTCAAGAGTGTTTGGAGGACTAAGTCCTAGAGTAAATTGTTAGTTATATTCAAATTGGTCACAAATGTTTGAAACATATAAATAAATATTAAAAAACTAGCTTAGCTTAGGCTAAAATCTTGAATTTTTTCAACAAAAATTAACATTTGGGGTTCTTTTAATTTCCTTTGTTCTTCAGAAAATGAAATTAAAAATTATGTTTGATGAAACAGGTGAGTGTTCCATGCAGCAATCTCTTAGACATTGTGACAGTCCGATGTGGTCACTGCAGCAACCTCTGGTCGGTGAACATGGCCGCCGCTTTCCAATCTCTCTCATGGAAAAATTCTCAGGTAATTAATTTATTTACTTCAAAGATTCTTTTGAATTTTGAACATGGGTCTGTTTTGAAAACCCTATACGGCGGCGGCGGCGGCGGCGGCGGCGGTGGCCGCCATAACCCATAACCTATTTTAGGGTTGCTAAGATCAAGAAAGAAAGTTTTCAAAATTCGAGGCAATTGGGTTGATTTGATTTGATTGATTTGTTGTTGGTGTTAGGGTTTTTAGGTTGAATCTTTCATGTCTTTTCCAAAGCTTTTGTCTTCTGCTGTTGAAACAACAGATCGATGAACCGATGGTTTCTCATCTTTTCTTTTGGATTTTCTTTCTTGAAACTCAAATTTTGAACCATTTGTTTAAGATCGTAGCTTATAATCTCTCTCTTTCAACACCCATCAACCCAAAATAGATTTGGTGAAATAATCGTCCAAGCTTATCACTTCACTAGAAAGAGGTTTTCTTCACCCTACTAGATATTGTCACTTTTCCTTTCGGGCTTACCTGAGAGAGGGTTTTAGGGTGTTTCGGTCCAAGCCCAACGCGACTAGATATTGTTCTTTTGAACTTTTCCTTTCAAGCTTACCTTCAACGTTTTAAAAACTAGAGAGAAGTTTTCACACTGTTGTAGAGAGTGTTTTTATCCAAGCCCACTACTACCAAATATGGTTCTTTTTTCTACTTTAAGGTGCCGGCTAGAGAGAGATTTTCCCACTCTTATAAAGAGTGTTTCATTCTCCTCTCTAACAGTGGAATCTTACCATATCTCTCTCTAGAACATATTATTAACTTTGATCTCTCTAACTTAGCTTATTTGTTTCCTTTCTCAAAGAGAAACAAAACTCATTTTATGAAATGGGTTTAAACACTTAGCTTCATACCTCTCTAACATGATTAGCTTAACCTGTCTCTCTCTCTCTATAGGCATCAAGCCACAGCCACAATGGAAATGCAGCTGATTACAGGGTGGAATTGGGCTCATCATCAAAATGCAACAACAAAACGAAGACGAGAGCACCAATTCAAAACACTACAAATGATGATCAAAGGGTAATCAACAGACGTAAGTTTTTTAAAAAAAGCCCTAAGAGTCGTTGTTTTTCCTCATATAAAATATGGCCTAAGAGTTGTTATTTTCAATTTTCAGCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATAAGTTCATAAAGTATGCACGAAAAATAAAAAAAAAAAATGAAATTTTGTTGATTTTTATGAAATTCTTTTTCATGGGTCATTTTAATTTTACTTTTACTTTTGAAATCTGACAAAATTACCTAAAATTCAGAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATGTAAGTACAACATTCAATTTTTTTTTATTATTGGAAAATATGGCGATCTTTTGGGTATTGACTTGCTTGTTTCTGAAAATGGCAGTGGGCACATTACCCACACATTCAATGCCTCATGCTGGAAGCCAACAATCTCAAGACTCCGAATGATGTGAGTTGATTTGATATCTAAAAGTGTTTCTTCGATTTTGTTTCTCTAGGAGAAAGAACTTGAATCCTTCCACCATTGTCGAGAGTATCCATGTTCTTTACTTTCTAAAAATAGGGTTTTGAAAACTACTTTTTGTTTTGTTTCTTAAGGTTTGAGGAATTTGTAGCTATTAGATTAGGTCCGACTAGCTATGTCGGAATTTTTTTGGTCGGAGTAATGAAAAACAGGCTAGTCTTGGTTATTTTTGTATGAAAAGGAGTTTAAATAGTGGTGGGAAATTTGAAAGTTGTAATTTTGAGAGATTATTTTCGAGTTTAATTGATATTTAAACTTGTTTGTTCGAGTTTTTTTCTTTTTTTTTTTTTGCTCGTCGAACATCGACTTTCTTTACTTTCAAATGAGACCTAACTAGCTAACTCAGAATTTTCTAGTCTTGAAAAAAAAAAATTGAAGGGTTATTTATGTAGAGAATTTTGAGAACTTATTTTGTAGTTTATGAGTGAGTTTTTGAGTTGGGTTTTGATGACTTGATTGATAGGGATCTGAGAAGCATTATATGTCAGTGCCAGGGCTGCACTATTGATTAAAGAAATGATGATGAAAATGATATCATCTCATGATGTCCTCTCCACCCATTCAAGACCTTCTTCATCGCTTGAAAATGGTATTCTTTAAGGACAAAATTAACAGCCATGCACCATATGTTTCCTTTTCCATTCCTTTCTATCTTCACTTCAAACTACTTTATTGATTGTTAGGGGAATGTGTTCTTCAATTTATGACTCAAATTTTCCCTAATTTCCTTTACCATGTTATGTGTTTGATTTTATTACGTATGTTTCCCTGTTTCATTCGGGAATTTAAGTTAATCAGTGGAATACCGTC

mRNA sequence

CTAGAAGTTTCACTGTTTTGATACATTGAAACCAGAAGAAGAACATAAAGCATCTATCTTCTTGCTCTTTTTCTCATTTCATTTGGAGGGTTTTCTCATTTAATCTCCATTCACTTCTAAAACCTTCATTTTTTTGTTCTTTTTCTTCTAAGCTCAAGCATGTCAAGCTGCATCAACAGTGCACAGGAGCAACTCTGCTATATTCCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATCTCTTAGACATTGTGACAGTCCGATGTGGTCACTGCAGCAACCTCTGGTCGGTGAACATGGCCGCCGCTTTCCAATCTCTCTCATGGAAAAATTCTCAGGCATCAAGCCACAGCCACAATGGAAATGCAGCTGATTACAGGGTGGAATTGGGCTCATCATCAAAATGCAACAACAAAACGAAGACGAGAGCACCAATTCAAAACACTACAAATGATGATCAAAGGGTAATCAACAGACCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATAAGTTCATAAAAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTACCCACACATTCAATGCCTCATGCTGGAAGCCAACAATCTCAAGACTCCGAATGATGGATCTGAGAAGCATTATATGTCAGTGCCAGGGCTGCACTATTGATTAAAGAAATGATGATGAAAATGATATCATCTCATGATGTCCTCTCCACCCATTCAAGACCTTCTTCATCGCTTGAAAATGGTATTCTTTAAGGACAAAATTAACAGCCATGCACCATATGTTTCCTTTTCCATTCCTTTCTATCTTCACTTCAAACTACTTTATTGATTGTTAGGGGAATGTGTTCTTCAATTTATGACTCAAATTTTCCCTAATTTCCTTTACCATGTTATGTGTTTGATTTTATTACGTATGTTTCCCTGTTTCATTCGGGAATTTAAGTTAATCAGTGGAATACCGTC

Coding sequence (CDS)

ATGTCAAGCTGCATCAACAGTGCACAGGAGCAACTCTGCTATATTCCCTGCAATTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGCAATCTCTTAGACATTGTGACAGTCCGATGTGGTCACTGCAGCAACCTCTGGTCGGTGAACATGGCCGCCGCTTTCCAATCTCTCTCATGGAAAAATTCTCAGGCATCAAGCCACAGCCACAATGGAAATGCAGCTGATTACAGGGTGGAATTGGGCTCATCATCAAAATGCAACAACAAAACGAAGACGAGAGCACCAATTCAAAACACTACAAATGATGATCAAAGGGTAATCAACAGACCTCCCGAGAAGAAGCAGAGAGTACCTTCTGCATATAATAAGTTCATAAAAGAGGAAATCCAGAGGATCAAAGCAAATAATCCAGATATTACCCACAGGGAAGCATTCAGTACTGCTGCTAAAAATTGGGCACATTACCCACACATTCAATGCCTCATGCTGGAAGCCAACAATCTCAAGACTCCGAATGATGGATCTGAGAAGCATTATATGTCAGTGCCAGGGCTGCACTATTGA

Protein sequence

MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKHYMSVPGLHY

Homology

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BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot
Match: Q8GW46 (Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.2e-54
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS+L DIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  SHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVPSAYNKFI 127
           +++          E GSSS+ + K  +R  I   T  +QR++NRPPEK+QRVPSAYN+FI
Sbjct: 67  NYA--------VPEYGSSSRSHTKIPSR--ISTRTITEQRIVNRPPEKRQRVPSAYNQFI 126

Query: 128 KEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEAN 169
           KEEIQRIKANNPDI+HREAFSTAAKNWAH+PHI   LMLE+N
Sbjct: 127 KEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

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BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot
Match: Q10FZ7 (Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.1e-40
Identity = 89/162 (54.94%), Postives = 119/162 (73.46%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MS+ I  A E +CY+ CNFCN + AVSVP +++L+IVTVRCGHC++L SVN+    Q+L 
Sbjct: 1   MSAQIVPAPEHVCYVHCNFCNTIFAVSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALP 60

Query: 61  WKNS-QASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVIN-RPPEKKQR 120
            ++  Q +   HN +  +   E GSSS+       R P+  + ND + +++ RPPEK+QR
Sbjct: 61  AEDHLQDNLKMHNMSFRENYSEYGSSSRYG-----RVPMMFSKNDTEHMLHVRPPEKRQR 120

Query: 121 VPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHI 161
           VPSAYN+FIKEEI+RIKANNPDI+HREAFSTAAKNWAH+P+I
Sbjct: 121 VPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNI 157

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BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot
Match: Q2QM17 (Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.7e-36
Identity = 86/165 (52.12%), Postives = 109/165 (66.06%), Query Frame = 0


Query: 10  EQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQASSH 69
           EQ+CY+ CNFCN +LAVSVP +++L+IVTVRCGHC+NL SVN+     S          H
Sbjct: 9   EQVCYVHCNFCNTILAVSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHH 68

Query: 70  -SHNGNAADYRVELG----SSSKCNNKTKTRAP---------IQNTTNDDQRVINRPPEK 129
              +G +  +R + G      S  ++ +K R P          Q     +Q +  RPPEK
Sbjct: 69  LQESGLSGCFRDQSGYPEFGFSAASSSSKLRLPPAAAAMVSYSQQNQQLEQALHARPPEK 128

Query: 130 KQRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHI 161
           +QRVPSAYN+FIKEEI+RIKANNPDI+HREAFSTAAKNWAHYP+I
Sbjct: 129 RQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNI 173

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BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot
Match: A2X7Q3 (Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34
Identity = 93/215 (43.26%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNM-------------- 66
           S  EQLCY+ CN C+ +LAV VPCS+L   VTVRCGHC+NL SVN+              
Sbjct: 20  SPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPAN 79

Query: 67  -------------------AAAFQSLSWKNSQASSHSHNGNAADYRVELGSSSKCNNKTK 126
                                AFQ+ S    QA+S S +           SSS  +N   
Sbjct: 80  QLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITG-----RSSSSCASNAPA 139

Query: 127 TRAPIQNTTNDDQRV-------INRPPEKKQRVPSAYNKFIKEEIQRIKANNPDITHREA 179
            + P       +  +        NRPPEK+QRVPSAYN+FIK+EIQRIKA NPDI+HREA
Sbjct: 140 MQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREA 199

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BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot
Match: Q6H668 (Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.4e-34
Identity = 93/215 (43.26%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNM-------------- 66
           S  EQLCY+ CN C+ +LAV VPCS+L   VTVRCGHC+NL SVN+              
Sbjct: 20  SPTEQLCYVHCNCCDTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPAN 79

Query: 67  -------------------AAAFQSLSWKNSQASSHSHNGNAADYRVELGSSSKCNNKTK 126
                                AFQ+ S    QA+S S +           SSS  +N   
Sbjct: 80  QLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITG-----RSSSSCASNAPA 139

Query: 127 TRAPIQNTTNDDQRV-------INRPPEKKQRVPSAYNKFIKEEIQRIKANNPDITHREA 179
            + P       +  +        NRPPEK+QRVPSAYN+FIK+EIQRIKA NPDI+HREA
Sbjct: 140 MQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREA 199

[Close]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL
Match: A0A6J1HQH8 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111465685 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 8.4e-105
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL
Match: A0A6J1FBX3 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111444212 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.7e-102
Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNK KTRAPIQN TNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNNTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKT  DGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTQKDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL
Match: A0A6J1G2S8 (axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111450273 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87
Identity = 167/193 (86.53%), Postives = 177/193 (91.71%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSN+ DIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAAD-YRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRV 120
           W+NSQAS+H+H+G AAD YR ELGSSSKCNNK K RAPI+N TN+DQR+INR PEKKQRV
Sbjct: 61  WQNSQASNHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNEDQRIINRAPEKKQRV 120

Query: 121 PSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEANNL--KTPNDG 180
           PSAYN+FIKEEIQRIKANNPDITHREAFSTAAKNWAH+PHI   LMLE NNL  KT NDG
Sbjct: 121 PSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQAKTKNDG 180

Query: 181 SEKHYMSVPGLHY 190
           SEKH MSVPGLHY
Sbjct: 181 SEKHLMSVPGLHY 193

[Close]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL
Match: A0A6J1KCC5 (axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493637 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 2.7e-87
Identity = 167/193 (86.53%), Postives = 177/193 (91.71%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSN+ DIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNIFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAAD-YRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRV 120
           W+NSQAS+H+H+G AAD YR ELGSSSKCNNK K RAPI+N TNDDQR+INR PEKKQRV
Sbjct: 61  WQNSQASNHTHSGLAADHYRAELGSSSKCNNKMKMRAPIRNPTNDDQRIINRAPEKKQRV 120

Query: 121 PSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEANNL--KTPNDG 180
           PSAYN+FIKEEIQRIKANNPDITHREAFSTAAKNWAH+PHI   LMLE NNL  KT +DG
Sbjct: 121 PSAYNQFIKEEIQRIKANNPDITHREAFSTAAKNWAHFPHIHFGLMLETNNLQTKTKSDG 180

Query: 181 SEKHYMSVPGLHY 190
           SEKH MSVPGLHY
Sbjct: 181 SEKHLMSVPGLHY 193

[Close]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL
Match: A0A5A7V7D7 (Axial regulator YABBY 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G00020 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.5e-82
Identity = 162/194 (83.51%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCI+SAQEQLCYIPCNFCNIVLAVSVPCSNL DIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCISSAQEQLCYIPCNFCNIVLAVSVPCSNLFDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAAD-YRVELG-SSSKCNNKTKTRAPIQNTTND--DQRVINRPPEKK 120
           W+NSQAS+HSH+G+  D YRVELG SSSK N K K RAPI+N TND  DQR+INRPPEK+
Sbjct: 61  WQNSQASNHSHSGSGGDHYRVELGSSSSKSNTKMKMRAPIKNPTNDHHDQRLINRPPEKR 120

Query: 121 QRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEANNLKTPND 180
           QRVPSAYN+FIKEEIQRIKA NPDITHREAFSTAAKNWAH+PHI   LML+ NNL+T ND
Sbjct: 121 QRVPSAYNQFIKEEIQRIKATNPDITHREAFSTAAKNWAHFPHIHFGLMLDTNNLQTKND 180

Query: 181 GSEKHYMSVPGLHY 190
           GSEKH MSV GLHY
Sbjct: 181 GSEKHLMSVSGLHY 194

[Close]

BLAST of CmaCh12G012020 vs. NCBI nr
Match: XP_022965963.1 (axial regulator YABBY 5-like [Cucurbita maxima])

HSP 1 Score: 389.4 bits (999), Expect = 1.7e-104
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. NCBI nr
Match: XP_023538153.1 (axial regulator YABBY 5-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7021239.1 Axial regulator YABBY 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 7.3e-103
Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNK KTRAPIQNTTNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNTTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKT NDGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTQNDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. NCBI nr
Match: KAG6586389.1 (Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381.7 bits (979), Expect = 3.6e-102
Identity = 186/189 (98.41%), Postives = 186/189 (98.41%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNK KTRAPIQNTTNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNTTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKT  DGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTQKDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. NCBI nr
Match: XP_022937991.1 (axial regulator YABBY 5-like [Cucurbita moschata])

HSP 1 Score: 379.8 bits (974), Expect = 1.4e-101
Identity = 185/189 (97.88%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNK KTRAPIQN TNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNNTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPNDGSEKH 180
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKT  DGSEKH
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTQKDGSEKH 180

Query: 181 YMSVPGLHY 190
           YMSVPGLHY
Sbjct: 181 YMSVPGLHY 189

[Close]

BLAST of CmaCh12G012020 vs. NCBI nr
Match: XP_023538154.1 (axial regulator YABBY 5-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.4 bits (903), Expect = 2.4e-93
Identity = 173/175 (98.86%), Postives = 173/175 (98.86%), Query Frame = 0


Query: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60
           MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS
Sbjct: 1   MSSCINSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLS 60

Query: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVP 120
           WKNSQASSHSHNGNAADYRVELGSSSKCNNK KTRAPIQNTTNDDQRVINRPPEKKQRVP
Sbjct: 61  WKNSQASSHSHNGNAADYRVELGSSSKCNNKMKTRAPIQNTTNDDQRVINRPPEKKQRVP 120

Query: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTPND 176
           SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKT ND
Sbjct: 121 SAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQCLMLEANNLKTQND 175

[Close]

BLAST of CmaCh12G012020 vs. TAIR 10
Match: AT2G26580.1 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS+L DIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  SHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVPSAYNKFI 127
           +++          E GSSS+ + K  +R  I   T  +QR++NRPPEK+QRVPSAYN+FI
Sbjct: 67  NYA--------VPEYGSSSRSHTKIPSR--ISTRTITEQRIVNRPPEKRQRVPSAYNQFI 126

Query: 128 KEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEAN 169
           KEEIQRIKANNPDI+HREAFSTAAKNWAH+PHI   LMLE+N
Sbjct: 127 KEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of CmaCh12G012020 vs. TAIR 10
Match: AT2G26580.2 (plant-specific transcription factor YABBY family protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-55
Identity = 112/162 (69.14%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 8   AQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQAS 67
           A EQLCYIPCNFCNI+LAV+VPCS+L DIVTVRCGHC+NLWSVNMAAA QSLS  N QA+
Sbjct: 7   ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNFQAT 66

Query: 68  SHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVINRPPEKKQRVPSAYNKFI 127
           +++          E GSSS+ + K  +R  I   T  +QR++NRPPEK+QRVPSAYN+FI
Sbjct: 67  NYA--------VPEYGSSSRSHTKIPSR--ISTRTITEQRIVNRPPEKRQRVPSAYNQFI 126

Query: 128 KEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEAN 169
           KEEIQRIKANNPDI+HREAFSTAAKNWAH+PHI   LMLE+N
Sbjct: 127 KEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESN 158

[Close]

BLAST of CmaCh12G012020 vs. TAIR 10
Match: AT1G08465.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 145.2 bits (365), Expect = 5.3e-35
Identity = 81/168 (48.21%), Postives = 110/168 (65.48%), Query Frame = 0


Query: 5   INSAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWK-- 64
           ++ + E++CY+ C+FC  +LAVSVP ++L  +VTVRCGHC+NL S+N+  +    S    
Sbjct: 3   VDFSSERVCYVHCSFCTTILAVSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPI 62

Query: 65  NSQASSHSHNGNAADYRVELGSSSKCNNKTKTRAPIQNTTNDDQRVIN-RPPEKKQRVPS 124
           +     H  +  +   R +  SSS+  N        +N   +  R+   RPPEK+QRVPS
Sbjct: 63  HQDLQPHRQHTTSLVTRKDCASSSRSTNNLS-----ENIDREAPRMPPIRPPEKRQRVPS 122

Query: 125 AYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHIQC-LMLEAN 169
           AYN+FIKEEIQRIKA NP+I+HREAFSTAAKNWAH+PHI   L L+ N
Sbjct: 123 AYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHFGLKLDGN 165

[Close]

BLAST of CmaCh12G012020 vs. TAIR 10
Match: AT2G45190.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 83/167 (49.70%), Postives = 102/167 (61.08%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAA-AFQSLSWKNSQ 66
           S  + LCY+ CNFC  +LAV+VP ++L   VTVRCG C+NL SVNM +    + +    Q
Sbjct: 20  SPSDHLCYVQCNFCQTILAVNVPYTSLFKTVTVRCGCCTNLLSVNMRSYVLPASNQLQLQ 79

Query: 67  ASSHSHNGNAADYRVEL-GSSSKCNNKTKTRAPIQNTTNDDQRV-----------INRPP 126
              HS+  N  D   EL  + S  N     + P  N       +           +NRPP
Sbjct: 80  LGPHSY-FNPQDILEELRDAPSNMNMMMMNQHPTMNDIPSFMDLHQQHEIPKAPPVNRPP 139

Query: 127 EKKQRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHI 161
           EK+QRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAH+PHI
Sbjct: 140 EKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 185

[Close]

BLAST of CmaCh12G012020 vs. TAIR 10
Match: AT4G00180.1 (Plant-specific transcription factor YABBY family protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.6e-31
Identity = 84/180 (46.67%), Postives = 104/180 (57.78%), Query Frame = 0


Query: 7   SAQEQLCYIPCNFCNIVLAVSVPCSNLLDIVTVRCGHCSNLWSVNMAAAFQSLSWKNSQA 66
           S+ +QLCY+ C+FC+ VLAVSVP S+L   VTVRCGHCSNL SV +  + ++L   +   
Sbjct: 20  SSTDQLCYVHCSFCDTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTV--SMRALLLPSVSN 79

Query: 67  SSHSH--------NGNAADYRVELGSSSKCNNKTKTRAPIQN-------TTNDDQRV--- 126
             HS           N  +     G +   N      A   +        T + + V   
Sbjct: 80  LGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHL 139

Query: 127 --------INRPPEKKQRVPSAYNKFIKEEIQRIKANNPDITHREAFSTAAKNWAHYPHI 161
                    NRPPEK+QRVPSAYN+FIKEEIQRIKA NPDI+HREAFS AAKNWAH+PHI
Sbjct: 140 QEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHI 197

The following BLAST results are available for this feature:

BLAST of CmaCh12G012020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GW46	2.2e-54	69.14	Axial regulator YABBY 5 OS=Arabidopsis thaliana OX=3702 GN=YAB5 PE=1 SV=1	[more]
Q10FZ7	9.1e-40	54.94	Protein YABBY 2 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB2 PE=2 SV=1	[more]
Q2QM17	2.7e-36	52.12	Protein YABBY 6 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB6 PE=2 SV=1	[more]
A2X7Q3	4.4e-34	43.26	Protein YABBY 4 OS=Oryza sativa subsp. indica OX=39946 GN=YAB4 PE=3 SV=1	[more]
Q6H668	4.4e-34	43.26	Protein YABBY 4 OS=Oryza sativa subsp. japonica OX=39947 GN=YAB4 PE=2 SV=1	[more]

BLAST of CmaCh12G012020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQH8	8.4e-105	100.00	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111465685 PE=3 SV...	[more]
A0A6J1FBX3	6.7e-102	97.88	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111444212 PE=3 ...	[more]
A0A6J1G2S8	2.1e-87	86.53	axial regulator YABBY 5-like OS=Cucurbita moschata OX=3662 GN=LOC111450273 PE=3 ...	[more]
A0A6J1KCC5	2.7e-87	86.53	axial regulator YABBY 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493637 PE=3 SV...	[more]
A0A5A7V7D7	1.5e-82	83.51	Axial regulator YABBY 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmaCh12G012020 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965963.1	1.7e-104	100.00	axial regulator YABBY 5-like [Cucurbita maxima]	[more]
XP_023538153.1	7.3e-103	98.94	axial regulator YABBY 5-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7021239...	[more]
KAG6586389.1	3.6e-102	98.41	Axial regulator YABBY 5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022937991.1	1.4e-101	97.88	axial regulator YABBY 5-like [Cucurbita moschata]	[more]
XP_023538154.1	2.4e-93	98.86	axial regulator YABBY 5-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh12G012020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26580.1	1.6e-55	69.14	plant-specific transcription factor YABBY family protein	[more]
AT2G26580.2	1.6e-55	69.14	plant-specific transcription factor YABBY family protein	[more]
AT1G08465.1	5.3e-35	48.21	Plant-specific transcription factor YABBY family protein	[more]
AT2G45190.1	2.2e-33	49.70	Plant-specific transcription factor YABBY family protein	[more]
AT4G00180.1	3.6e-31	46.67	Plant-specific transcription factor YABBY family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006780	YABBY protein	PFAM	PF04690	YABBY	coord: 8..162 e-value: 5.0E-67 score: 225.7
IPR006780	YABBY protein	PANTHER	PTHR31675	PROTEIN YABBY 6-RELATED	coord: 1..179
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 100..161 e-value: 3.4E-6 score: 29.3
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 105..158
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..108
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..107
None	No IPR available	PANTHER	PTHR31675:SF6	AXIAL REGULATOR YABBY 5	coord: 1..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G012020.1	CmaCh12G012020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0007275	multicellular organism development
cellular_component	GO:0005634	nucleus