CmaCh12G011470 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G011470
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	c-Myc-binding protein homolog
Location	Cma_Chr12: 9040196 .. 9043046 (-)
RNA-Seq Expression	CmaCh12G011470
Synteny	CmaCh12G011470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGCTTTTGGCGAAACTTACGATCGTGGGCCACGGTAATCAAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGTCAGATCTAGCGAAATCGACACACCCAATTGCTTGAATCGCTCTATCTTGGTCATAATTCGAACCCCTTTTTCTGCGATTTAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGGTTGATTCTCACCATTTCTCTGCTTCAATCCGTATTGCGTTTGAATTTTGATACATTTTCTTTTCTGCGTTCTTTTGCTGGTTGAAGTTCTGGTTGCGTTGTTTGAGCAAAACGATAAGCCTTCCTCTGCTCTCGAGTAAGTTCTTGCTTTGAGCTTTTGATATGTGAAGTTAACCATTGTTCTAGCTATTAATTTTGCACCTAATATCTCGTTTGGCTGTTAGACGAACACGACTCTCCACAATGATATGATATTGTCAACTTTGAGCCTAAGCTCTCATGGCTTTGCTTTGGCTTCCCAAAAGGCCTCATACCAATGGAGAGAGTATTCTTGATTATAAACCCATGATCATTCCCATTTGTGGGTGCGGCTAACTCTCCGTGAGGCTCCGTTTTATTTTCCCATTGAGGCCGAACCTAAACCTGTGCCTCGATCTCACTCAATTTTCCTTCAATGATTGAAGAAAGTGTGTTATATCTCTCCTCCTCAGAGGGAGAAGGCCTATCCTCCTCCTTCTTTTTGCTGTCCATATAGACTCGGATCATGAGTCGAGCCGATGTGTGACTTTTATCATCAAACATTGGCATTATCAAATCTCATAATGTTCTACTAATATCGTCCAATCAATAGTTGATCTTAGTTACAAGCTGTCTAAACAATGTTTTTATCTTGTTTTGATTCCTAAACTTTCGTTTCGGTCCATTTTCAAATCCTTTAATCACTTTCTGATTGAAAATAATGGCATGATTCATTCGAATTCTGGTCTGTTTGAGCTTGAGGAGGCTGGATTAGTTTCGTTTTTCTGAATTATTTGAAAGTTGTGAGGAGAATTCAAATCTTTCTCCTTCTGAATCCTGTCAAGCATTCAACCAAAGCATGCTTTATGTTTAGAAAGTTAAACAATAAACTAAAAGGTGTTTGCCATGTTAGAAATGATGTGAGATCCCACATCAGTTGGGGAGGAGAACGAAACATTCTTTGTGGAAACCTCTACCTAGCATACGCGTTTTAGAAACCTTGAGGGGAAGCCTAAAGAGGACAATATCTGCTAGCTGTGAGCTTCGGCTGATACAAATGGTATTGTATCAGAGCCAGGCACTGGGCGATGTGCCAGGGAGGAGGATGAGTCCTGAAGGGGGTGGTGGACACGAGGCGGTGTGCCAACAAGGACTCTGGGCACCGAAGGGGGGTGAATTGGAGGGGTTCCACATCGATTGGAGAAAGAAGCATTCTTTATAAGGGTTGTGAGATCCCACATCTGTTGGGGAGGAGAACGAAGCATTCTTTATAAGGGTGTGAAAACTTCTCCATAGCATACGCGTTTTAAAAACCTTGACGGAAAACCCGAAAGAGAAAGTCCAAAGAGGACAATATCTGGTGGGCTTGGGTCATTATAGAACGAGTGTCAGCGAGGACGCTGGGTCCCAAAAGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACTTCTCCCTAACATACGCGTTTGAAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGTTCAAAGAGAACTATCTGCTAGCGGTGGGCTTAGGCCGTTACATATTCTCAACTAGAAAGTGAAAGTTATCATTTACTTTTGCTTGTAATTTGAAATGTTCAAAAAGTGTAGTTTTCTTCTTTTTCCTTTTTAAAAATAAATGAATGATTTTATTGAAGAGAATGAAATCATACAGAACTTTCCAAGATAGCACATTCCGATAGGAAGCACTATTGATAGACATCTTTTCTTTTACTCTCACAGATTTATCCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGCAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGGTAGCGTTGAAATTATCCGACTCGATACTATTGCACGTTGTTAAGAATATATGTAATGAATAAGTATATCATGTTGCAGTTGGTAGGACTTAGAAGTTCGCATAACGTCACAGCAACGTCTATCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGACTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGATAGCCAAGAAAAAGAAAGTGATATCTTATTCCTTAAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAGGATCATCTATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCACTTTAGTTCTAGTTTTGCTGTAATGTTTTTAGTGTACATTCGAAAATGAAACTGAAAACGTACACGTGCCATGGAAATAACATAACTATAATCTCCTTTGCTGAAACCCTCATGTAACCGCTCAAGCCCACCGCTAGCAGATATTGTTTTCCTTGGGCTTTCCCTTTCAAGTTTCCTCTAAAGGTTTTTAACACGTGTTTGTTAGGGAG

mRNA sequence

ATGTTGGGCTTTTGGCGAAACTTACGATCGTGGGCCACGGTAATCAAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAAAACGATAAGCCTTCCTCTGCTCTCGAATTTATCCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGCAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGTAGGACTTAGAAGTTCGCATAACGTCACAGCAACGTCTATCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGAAGGACTAATTGAGTTGCACATAGGAGGTTGATGGATTTTCTATATGATAGCCAAGAAAAAGAAAGTGATATCTTATTCCTTAAAGGTATGTGAAGATCTTACGCTATGAACGTTAAAAAGTTGAATTGTATGAGGATCATCTATCTTTTTACCTTTGATTCTTTGACATTGTTTGCTTTTGATAACTCTCACTTTAGTTCTAGTTTTGCTGTAATGTTTTTAGTGTACATTCGAAAATGAAACTGAAAACGTACACGTGCCATGGAAATAACATAACTATAATCTCCTTTGCTGAAACCCTCATGTAACCGCTCAAGCCCACCGCTAGCAGATATTGTTTTCCTTGGGCTTTCCCTTTCAAGTTTCCTCTAAAGGTTTTTAACACGTGTTTGTTAGGGAG

Coding sequence (CDS)

ATGTTGGGCTTTTGGCGAAACTTACGATCGTGGGCCACGGTAATCAAAGGCTCAAGTCGCTATGCGGGGCAAAGCTCAGACACCTGCAGGCCCCTAAACCAATATTCTTGCGAAAATGGGGACGGATTCCATCAAACAATCGCACACCCAACCAGCAAGCAACTGTGGAGGAGGAACCTCCATTTCTTCCCCATGGGACACATCCAGGAAAAAGAAGCGAAGAAGGAAGCATTTAGGAAGTATTTGGAGTCTAATGGCGTTGTTGATGCTCTCACCAAAGTTCTGGTTGCGTTGTTTGAGCAAAACGATAAGCCTTCCTCTGCTCTCGAATTTATCCAACAAAGACTAGGCGGTCCATCTATAGCTGAATACGAGCAGTTACAATCCGAGATGGCGGATTTGCAAGTCAAGTATGACGAGCTTTTAGCTACCCACAAGGAAACCTGTAAAGAGTTGGTAGGACTTAGAAGTTCGCATAACGTCACAGCAACGTCTATCAAGGATACCACTGATGACGAGGAGGAAAACGATAAGGTATGA

Protein sequence

MLGFWRNLRSWATVIKGSSRYAGQSSDTCRPLNQYSCENGDGFHQTIAHPTSKQLWRRNLHFFPMGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEYEQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV

Homology

[Close]

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot
Match: Q2TBP7 (c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYCBP PE=3 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGG--PSIA 124
           M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1   MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 125 EYEQLQSEMADLQVKYDELLATHKE 148
           E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61  EIELLRLELAEMKEKYEAIVEENKK 85

[Close]

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot
Match: Q99417 (c-Myc-binding protein OS=Homo sapiens OX=9606 GN=MYCBP PE=1 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGG--PSIA 124
           M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1   MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 125 EYEQLQSEMADLQVKYDELLATHKE 148
           E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61  EIELLRLELAEMKEKYEAIVEENKK 85

[Close]

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot
Match: Q9EQS3 (c-Myc-binding protein OS=Mus musculus OX=10090 GN=Mycbp PE=1 SV=5)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 40/91 (43.96%), Postives = 64/91 (70.33%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGG--PSIA 124
           M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1   MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPTSALDFLKHHLGAATPENP 60

Query: 125 EYEQLQSEMADLQVKYDELLATHKETCKELV 154
           E E L+ E+A+++ KY+  +  +K+   +LV
Sbjct: 61  EIELLRLELAEMKEKYEATVEENKKLKAKLV 91

[Close]

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot
Match: Q5R7A8 (c-Myc-binding protein OS=Pongo abelii OX=9601 GN=MYCBP PE=3 SV=3)

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-14
Identity = 38/85 (44.71%), Postives = 62/85 (72.94%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGG--PSIA 124
           M H +  ++K+E FR+YLE +GV+D LTKVLVAL+E+ +KP+SAL+F++  LG   P   
Sbjct: 1   MAHYKAADSKREQFRRYLEKSGVLDTLTKVLVALYEEPEKPNSALDFLKHHLGAATPENP 60

Query: 125 EYEQLQSEMADLQVKYDELLATHKE 148
           E E L+ E+A+++ KY+ ++  +K+
Sbjct: 61  EIELLRLELAEIKEKYEAIVEENKK 85

[Close]

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot
Match: Q54I57 (c-Myc-binding protein homolog OS=Dictyostelium discoideum OX=44689 GN=mycbp PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.0e-12
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 70  EKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEYEQLQS 129
           +  A+KE F+ YLE +GV+DALTKVLV L+E++DKPS ALEFI++ LG     + + L+ 
Sbjct: 2   QNSAEKEEFKGYLEKSGVIDALTKVLVGLYEESDKPSDALEFIKKHLGNSLGIDVDALKQ 61

Query: 130 EMADLQVKYDELLATHKETCKEL 153
           E ADL+ +   L     +  K+L
Sbjct: 62  ENADLKAEVSALTQRVDDLSKKL 84

[Close]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL
Match: A0A6J1HQ97 (c-Myc-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111465694 PE=3 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.7e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY
Sbjct: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV
Sbjct: 61  EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 115

[Close]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL
Match: A0A6J1FDN0 (c-Myc-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444425 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEY
Sbjct: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           E+LQSEMADLQVKYDELLATHKETCKEL GL+S HNVTA S KDTTDDEEENDKV
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 115

[Close]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL
Match: A0A1S3C377 (c-Myc-binding protein homolog OS=Cucumis melo OX=3656 GN=LOC103496370 PE=3 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 9.0e-48
Identity = 101/115 (87.83%), Postives = 109/115 (94.78%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGH +EKEAKKEAFRKYLESNG+VDALTKVLVAL+EQNDKPSSALEFIQQRLGGPS AEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           E+LQSEMADLQVKYDELLATHKETCKEL  L+SSHN+T TS KDTTDDE+ENDK+
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEELKSSHNITVTSTKDTTDDEDENDKL 115

[Close]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL
Match: A0A5A7V8R5 (c-Myc-binding protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G001130 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.3e-46
Identity = 100/117 (85.47%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 63  FPMGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIA 122
           F +   QEKEAKKEAFRKYLESNG+VDALTKVLVAL+EQNDKPSSALEFIQQRLGGPS A
Sbjct: 63  FVLNLFQEKEAKKEAFRKYLESNGIVDALTKVLVALYEQNDKPSSALEFIQQRLGGPSKA 122

Query: 123 EYEQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           EYE+LQSEMADLQVKYDELLATHKETCKEL  L+SSHN+T TS KDTTDDE+ENDK+
Sbjct: 123 EYEKLQSEMADLQVKYDELLATHKETCKELEELKSSHNITVTSTKDTTDDEDENDKL 179

[Close]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL
Match: A0A6J1CPJ0 (c-Myc-binding protein homolog OS=Momordica charantia OX=3673 GN=LOC111012942 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 2.1e-44
Identity = 94/115 (81.74%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGH +EKEAKKEAFRKYLESNGVVDA TKVLVAL+EQNDKPSSALEFIQQRLGGPS+AEY
Sbjct: 1   MGHKEEKEAKKEAFRKYLESNGVVDAFTKVLVALYEQNDKPSSALEFIQQRLGGPSVAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           E+LQSE+ADL+VKYDELL+THKETCKEL  L+SSHNV  +S +DTTD E++NDK+
Sbjct: 61  EKLQSEVADLRVKYDELLSTHKETCKELEELKSSHNVAVSSTRDTTDGEDDNDKL 115

[Close]

BLAST of CmaCh12G011470 vs. NCBI nr
Match: KAG6586333.1 (c-Myc-binding protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339.7 bits (870), Expect = 1.5e-89
Identity = 167/178 (93.82%), Postives = 172/178 (96.63%), Query Frame = 0


Query: 2   LGFWRNLRSWATVIKGSSRYAGQSSDTCRPLNQYSCENGDGFHQTIAHPTSKQLWRRNLH 61
           +G WRN RSWATVI+GSSRYAGQSSDTCRPLNQYSCENGDGFHQTIAHPTSKQLWRRNLH
Sbjct: 15  VGLWRNSRSWATVIEGSSRYAGQSSDTCRPLNQYSCENGDGFHQTIAHPTSKQLWRRNLH 74

Query: 62  FFPMGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSI 121
           FFPMGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSI
Sbjct: 75  FFPMGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSI 134

Query: 122 AEYEQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           AEYE+LQSEMADLQVKYDELLATHKETCKEL GL+SSHNVT  S KDTTDDEEENDKV
Sbjct: 135 AEYEKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKDTTDDEEENDKV 192

[Close]

BLAST of CmaCh12G011470 vs. NCBI nr
Match: XP_023537914.1 (c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.5 bits (776), Expect = 1.2e-78
Identity = 150/157 (95.54%), Postives = 154/157 (98.09%), Query Frame = 0


Query: 23  GQSSDTCRPLNQYSCENGDGFHQTIAHPTSKQLWRRNLHFFPMGHIQEKEAKKEAFRKYL 82
           G+SSDTCRPL+QYSCENGDGFHQTIAHPT KQLWRRNLHFFPMGHIQEKEAKKEAFRKYL
Sbjct: 3   GKSSDTCRPLSQYSCENGDGFHQTIAHPTCKQLWRRNLHFFPMGHIQEKEAKKEAFRKYL 62

Query: 83  ESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEYEQLQSEMADLQVKYDELL 142
           ESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEYE+LQSEMADLQVKYDELL
Sbjct: 63  ESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEYEKLQSEMADLQVKYDELL 122

Query: 143 ATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           ATHKETCKEL GL+SSHNVTATS KDTTDDEEENDKV
Sbjct: 123 ATHKETCKELEGLKSSHNVTATSTKDTTDDEEENDKV 159

[Close]

BLAST of CmaCh12G011470 vs. NCBI nr
Match: XP_022965975.1 (c-Myc-binding protein homolog [Cucurbita maxima])

HSP 1 Score: 222.2 bits (565), Expect = 3.5e-54
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY
Sbjct: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV
Sbjct: 61  EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 115

[Close]

BLAST of CmaCh12G011470 vs. NCBI nr
Match: KAG7021180.1 (C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 2.3e-50
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEY
Sbjct: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           E+LQSEMADLQVKYDELLATHKETCKEL GL+SSHNVT  S KDTTDDEEENDKV
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSSHNVTTMSTKDTTDDEEENDKV 115

[Close]

BLAST of CmaCh12G011470 vs. NCBI nr
Match: XP_022938294.1 (c-Myc-binding protein homolog [Cucurbita moschata])

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-50
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQ+DKPSSALEFIQQRLGGPSIAEY
Sbjct: 1   MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQHDKPSSALEFIQQRLGGPSIAEY 60

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDEEENDKV 180
           E+LQSEMADLQVKYDELLATHKETCKEL GL+S HNVTA S KDTTDDEEENDKV
Sbjct: 61  EKLQSEMADLQVKYDELLATHKETCKELEGLKSLHNVTAMSTKDTTDDEEENDKV 115

[Close]

BLAST of CmaCh12G011470 vs. TAIR 10
Match: AT2G14045.1 (unknown protein; Has 257 Blast hits to 257 proteins in 101 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-34
Identity = 72/109 (66.06%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQNDKPSSALEFIQQ+LGGPS+++Y
Sbjct: 2   MRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDY 61

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDE 174
           E+LQ+E +DLQ+KY+ELLA H+ET +EL G++S H  +  S KD  D E
Sbjct: 62  EKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRE 108

[Close]

BLAST of CmaCh12G011470 vs. TAIR 10
Match: AT2G14045.2 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 4.3e-34
Identity = 72/109 (66.06%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQNDKPSSALEFIQQ+LGGPS+++Y
Sbjct: 2   MRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDY 61

Query: 125 EQLQSEMADLQVKYDELLATHKETCKELVGLRSSHNVTATSIKDTTDDE 174
           E+LQ+E +DLQ+KY+ELLA H+ET +EL G++S H  +  S KD  D E
Sbjct: 62  EKLQAEKSDLQIKYNELLAKHQETLRELNGVKSLH--SRNSSKDDADRE 108

[Close]

BLAST of CmaCh12G011470 vs. TAIR 10
Match: AT2G14045.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-26
Identity = 54/73 (73.97%), Postives = 69/73 (94.52%), Query Frame = 0


Query: 65  MGHIQEKEAKKEAFRKYLESNGVVDALTKVLVALFEQNDKPSSALEFIQQRLGGPSIAEY 124
           M + +EKE KKEAFRKYLES+GV+D+LTKVLV+L+EQNDKPSSALEFIQQ+LGGPS+++Y
Sbjct: 2   MRYKEEKEVKKEAFRKYLESSGVLDSLTKVLVSLYEQNDKPSSALEFIQQKLGGPSVSDY 61

Query: 125 EQLQSEMADLQVK 138
           E+LQ+E +DLQ+K
Sbjct: 62  EKLQAEKSDLQIK 74

The following BLAST results are available for this feature:

BLAST of CmaCh12G011470 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2TBP7	3.7e-14	44.71	c-Myc-binding protein OS=Bos taurus OX=9913 GN=MYCBP PE=3 SV=3	[more]
Q99417	3.7e-14	44.71	c-Myc-binding protein OS=Homo sapiens OX=9606 GN=MYCBP PE=1 SV=3	[more]
Q9EQS3	3.7e-14	43.96	c-Myc-binding protein OS=Mus musculus OX=10090 GN=Mycbp PE=1 SV=5	[more]
Q5R7A8	3.7e-14	44.71	c-Myc-binding protein OS=Pongo abelii OX=9601 GN=MYCBP PE=3 SV=3	[more]
Q54I57	2.0e-12	45.78	c-Myc-binding protein homolog OS=Dictyostelium discoideum OX=44689 GN=mycbp PE=3...	[more]

BLAST of CmaCh12G011470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQ97	1.7e-54	100.00	c-Myc-binding protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111465694 PE=3 S...	[more]
A0A6J1FDN0	1.9e-50	93.91	c-Myc-binding protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111444425 PE=3...	[more]
A0A1S3C377	9.0e-48	87.83	c-Myc-binding protein homolog OS=Cucumis melo OX=3656 GN=LOC103496370 PE=3 SV=1	[more]
A0A5A7V8R5	1.3e-46	85.47	c-Myc-binding protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CPJ0	2.1e-44	81.74	c-Myc-binding protein homolog OS=Momordica charantia OX=3673 GN=LOC111012942 PE=...	[more]

BLAST of CmaCh12G011470 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6586333.1	1.5e-89	93.82	c-Myc-binding protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023537914.1	1.2e-78	95.54	c-Myc-binding protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022965975.1	3.5e-54	100.00	c-Myc-binding protein homolog [Cucurbita maxima]	[more]
KAG7021180.1	2.3e-50	93.91	C-Myc-binding protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022938294.1	4.0e-50	93.91	c-Myc-binding protein homolog [Cucurbita moschata]	[more]

BLAST of CmaCh12G011470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G14045.1	4.3e-34	66.06	unknown protein; Has 257 Blast hits to 257 proteins in 101 species: Archae - 0; ...	[more]
AT2G14045.2	4.3e-34	66.06	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]
AT2G14045.3	5.6e-26	73.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 124..144
None	No IPR available	PRINTS	PR02028	CMYCBINDINGP	coord: 82..96 score: 68.79 coord: 72..82 score: 68.91 coord: 96..110 score: 50.82
None	No IPR available	GENE3D	6.10.250.1060		coord: 106..153 e-value: 1.3E-5 score: 27.1
IPR026060	Associate of Myc 1	PANTHER	PTHR13168	ASSOCIATE OF C-MYC AMY-1	coord: 65..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G011470.1	CmaCh12G011470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003713	transcription coactivator activity