CmaCh12G011330 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh12G011330
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Alba domain-containing protein
Location	Cma_Chr12: 8927626 .. 8929070 (+)
RNA-Seq Expression	CmaCh12G011330
Synteny	CmaCh12G011330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGAAAAACTGCAAGAGAGAATCTGTTGTTCTTGTTGCTTTGATCTGAGAGATCGAGGAATATATAGTGAAAAGAGATCGAAGATCGAAGATATGACGACGACGATTGCGGTATCAGGAGCCACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGGTATTCACAAATTGTTCTCTTGTTCTTCCATTCTTTTCGATTTGAAATTTGTTCCGTTTTTGTTTCGTTCTTGAGAAATGGAATCGAAATGTGTAAGGTAAGAACGAACCGTCAATTGATCCGATTCTTTTGATTTTGCATACAATCGTCTAATTTTAGTTTCTTCTTTGTTTAATTGTTTTATTGGAAATTTGAATCTTGCTCTCAAAGTTTGCCTTAAGATCTCCTTTCGTTTTTGATGAAATTGAGATTTGAGATTACGATTTGAGCAAGAATTTGAAACGATTTCATTCGGATAATCGTTTGATTTTAGTTTCTTGATTGTTGAGATGTTTTATCGGAAATTTGAATCGTTTGCCCTAAGATCCCCTTTCGTTGATTTTTTTCGATGAAATCGAGATTGAAGATTACGACTTTTTACATCAATGTGTTTAATTCTTGATTTAGAGGTACATTCAACAGCATAATGAGGTTGAGCTTTCTGCATTGGGAATGGGTATTGTTTCAATTCTTGAAAATCTTTTAATTTTTCCGCTATTGGTACATGTGTTTTTTGATTTTCTTATCTCAAATTCTCTGTATCATTACAGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAAAACAATGGATTGGCTACAGAGAAGAGTAATTCTGTTAACATATTCGTTAATTCAAGTAATTTCTTGATAAAATGGTTATCACCGATGATTTGTATGGTTTTGTTGTGAAACAGAAGTTTTGACTTCTACCGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGGTTCGTATGATTTTGATACGATGTATTTTCATTTTTAGCCAGGAATGCTCAGATTAATCTTGTGGGATAACTTTCATTACATGAATTTGTTGGCATGTTTAAGTTTTTCATCGTTGGATATGAATTGTTCTTTTAGTTTTGAAACTTTTCGTGTTTTGGGTCGATTTTGATAGATTGTTTGATTATGAACTTCAAGTTTATATGATATGTTAAGTTACTGGTAATTCATTCGAACTTTGATTATGATCCTAGATTGAAATTGGGATTGAGTTTTGAAACGTTTCTTGTTTTGGGTCGATTTTGATAGATTGAGATCGTTCTGGGAAAGTCGGAAAAATTTGATTCTCTGATGACAGCGGCCACGGTGGCGGCGGAGGCGACAGCGGGGGGTGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAATAG

mRNA sequence

GAGAAAAACTGCAAGAGAGAATCTGTTGTTCTTGTTGCTTTGATCTGAGAGATCGAGGAATATATAGTGAAAAGAGATCGAAGATCGAAGATATGACGACGACGATTGCGGTATCAGGAGCCACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCATAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAAAACAATGGATTGGCTACAGAGAAGAAAGTTTTGACTTCTACCGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGATTGAGATCGTTCTGGGAAAGTCGGAAAAATTTGATTCTCTGATGACAGCGGCCACGGTGGCGGCGGAGGCGACAGCGGGGGGTGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAATAG

Coding sequence (CDS)

ATGACGACGACGATTGCGGTATCAGGAGCCACTGAAACACAGAAGAAGAATAGAATTCAGGTTTCGAATACCAAGAAACCACTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAGCATAATGAGGTTGAGCTTTCTGCATTGGGAATGGCAATCACTACCGTTGTCACAATTGCAGAGATTCTAAAAAACAATGGATTGGCTACAGAGAAGAAAGTTTTGACTTCTACCGTCGGCATGAAGGATGAGAACAAAGGTCGTTTGGTTCAGAAAGCTAAGATTGAGATCGTTCTGGGAAAGTCGGAAAAATTTGATTCTCTGATGACAGCGGCCACGGTGGCGGCGGAGGCGACAGCGGGGGGTGGCGAGGAGAAAAAAAAGGCAGGAGAGGAAAGCAAGGAGGGGCAATAG

Protein sequence

MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEATAGGGEEKKKAGEESKEGQ

Homology

[Close]

BLAST of CmaCh12G011330 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-37
Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAE 119
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKE 122

[Close]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1HLL6 (uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC111465325 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.6e-63
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 36  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 95

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT
Sbjct: 96  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 155

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGGGEEKKKAGEESKEGQ
Sbjct: 156 AGGGEEKKKAGEESKEGQ 173

[Close]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1FHQ7 (uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC111444252 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.1e-60
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVS ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSRATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEA 
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGG EEKKKAGEESKEGQ
Sbjct: 121 AGGREEKKKAGEESKEGQ 138

[Close]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL
Match: A0A6J1CQ10 (uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 1.3e-51
Identity = 123/133 (92.48%), Postives = 123/133 (92.48%), Query Frame = 0


Query: 4   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 63
           TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI
Sbjct: 3   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 62

Query: 64  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEATAGG 123
           LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT AA   A  
Sbjct: 63  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAAAPEAA-- 122

Query: 124 GEEKKKAGEESKE 137
            EEKK   EESKE
Sbjct: 123 AEEKK--AEESKE 131

[Close]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL
Match: A0A0A0LG69 (Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51
Identity = 126/144 (87.50%), Postives = 127/144 (88.19%), Query Frame = 0


Query: 1   MTTTIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTV 60
           M  TIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTV
Sbjct: 1   MAATIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTV 60

Query: 61  VTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAA 120
           VTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT   
Sbjct: 61  VTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVP 120

Query: 121 E---ATAGGGEEKKKAGEESKEGQ 139
           E   A A   EE+KKA EESKE Q
Sbjct: 121 ETVVAVAAAAEEEKKA-EESKEEQ 143

[Close]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.7e-51
Identity = 125/141 (88.65%), Postives = 127/141 (90.07%), Query Frame = 0


Query: 4   TIAVSG---ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 63
           TIAVSG   ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 3   TIAVSGATPATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 62

Query: 64  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAE-- 123
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAAT   E  
Sbjct: 63  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATAVPETV 122

Query: 124 -ATAGGGEEKKKAGEESKEGQ 139
            A A  GEE+KKA EE+KE Q
Sbjct: 123 VAVAAAGEEEKKA-EENKEEQ 142

[Close]

BLAST of CmaCh12G011330 vs. NCBI nr
Match: XP_022965411.1 (uncharacterized protein At2g34160-like [Cucurbita maxima])

HSP 1 Score: 249.6 bits (636), Expect = 1.6e-62
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 36  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 95

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT
Sbjct: 96  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 155

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGGGEEKKKAGEESKEGQ
Sbjct: 156 AGGGEEKKKAGEESKEGQ 173

[Close]

BLAST of CmaCh12G011330 vs. NCBI nr
Match: KAG6586319.1 (hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 246.1 bits (627), Expect = 1.7e-61
Identity = 136/138 (98.55%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATV AEA 
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVTAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGGGEEKKKAGEESKEGQ
Sbjct: 121 AGGGEEKKKAGEESKEGQ 138

[Close]

BLAST of CmaCh12G011330 vs. NCBI nr
Match: XP_023537985.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.5 bits (615), Expect = 4.3e-60
Identity = 136/139 (97.84%), Postives = 136/139 (97.84%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 46  MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 105

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL-MTAATVAAEA 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSL MTAATVA EA
Sbjct: 106 AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMMTAATVATEA 165

Query: 121 TAGGGEEKKKAGEESKEGQ 139
            AGGGEEKKKAGEESKEGQ
Sbjct: 166 AAGGGEEKKKAGEESKEGQ 184

[Close]

BLAST of CmaCh12G011330 vs. NCBI nr
Match: XP_022938043.1 (uncharacterized protein At2g34160-like [Cucurbita moschata])

HSP 1 Score: 241.5 bits (615), Expect = 4.3e-60
Identity = 135/138 (97.83%), Postives = 135/138 (97.83%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVS ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 1   MTTTIAVSRATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEA 
Sbjct: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAA 120

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGG EEKKKAGEESKEGQ
Sbjct: 121 AGGREEKKKAGEESKEGQ 138

[Close]

BLAST of CmaCh12G011330 vs. NCBI nr
Match: KAG7021166.1 (hypothetical protein SDJN02_17854, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 227.3 bits (578), Expect = 8.3e-56
Identity = 129/138 (93.48%), Postives = 129/138 (93.48%), Query Frame = 0


Query: 1   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 60
           MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI
Sbjct: 4   MTTTIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI 63

Query: 61  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEAT 120
           AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKA       KSEKFDSLMTAATV AEA 
Sbjct: 64  AEILKNNGLATEKKVLTSTVGMKDENKGRLVQKA-------KSEKFDSLMTAATVTAEAA 123

Query: 121 AGGGEEKKKAGEESKEGQ 139
           AGGGEEKKKAGEESKEGQ
Sbjct: 124 AGGGEEKKKAGEESKEGQ 134

[Close]

BLAST of CmaCh12G011330 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.3e-43
Identity = 97/133 (72.93%), Postives = 106/133 (79.70%), Query Frame = 0


Query: 4   TIAVSGATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEI 63
           T   +   ET KKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTI+EI
Sbjct: 25  TTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEI 84

Query: 64  LKNNGLATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEATAGG 123
           LKNNGLATEKKVLTSTVGMKDE KG++VQKAKIEIVLGKS+KFDSL+   T         
Sbjct: 85  LKNNGLATEKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLVPPVTNGKTPEEEA 144

Query: 124 GEEKKKAGEESKE 137
             E + + E  +E
Sbjct: 145 SAETEASVEAQEE 157

[Close]

BLAST of CmaCh12G011330 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-39
Identity = 84/110 (76.36%), Postives = 95/110 (86.36%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAEA 120
           A EKK++TSTV +KD+++GR VQKAKIEI L KSEKFD LM AA    EA
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELMAAANEEKEA 123

[Close]

BLAST of CmaCh12G011330 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 157.1 bits (396), Expect = 9.9e-39
Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 10  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 69
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 70  ATEKKVLTSTVGMKDENKGRLVQKAKIEIVLGKSEKFDSLMTAATVAAE 119
           A EKK++TSTV +KD+ +GR VQKAKIEI L KSEKFD LM AA    E
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELMAAANEEKE 122

The following BLAST results are available for this feature:

BLAST of CmaCh12G011330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	1.4e-37	76.15	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of CmaCh12G011330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HLL6	7.6e-63	100.00	uncharacterized protein At2g34160-like OS=Cucurbita maxima OX=3661 GN=LOC1114653...	[more]
A0A6J1FHQ7	2.1e-60	97.83	uncharacterized protein At2g34160-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1CQ10	1.3e-51	92.48	uncharacterized protein At2g34160 OS=Momordica charantia OX=3673 GN=LOC111013094...	[more]
A0A0A0LG69	5.1e-51	87.50	Alba domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G010240 PE=4 S...	[more]
A0A5D3D4G4	6.7e-51	88.65	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of CmaCh12G011330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022965411.1	1.6e-62	100.00	uncharacterized protein At2g34160-like [Cucurbita maxima]	[more]
KAG6586319.1	1.7e-61	98.55	hypothetical protein SDJN03_19052, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023537985.1	4.3e-60	97.84	uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022938043.1	4.3e-60	97.83	uncharacterized protein At2g34160-like [Cucurbita moschata]	[more]
KAG7021166.1	8.3e-56	93.48	hypothetical protein SDJN02_17854, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh12G011330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	2.3e-43	72.93	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	1.5e-39	76.36	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	9.9e-39	76.15	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 15..124 e-value: 1.4E-53 score: 181.7
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 16..111
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..136 e-value: 1.2E-61 score: 205.0
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 7..126
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 17..79 e-value: 2.7E-13 score: 49.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..138
None	No IPR available	PANTHER	PTHR31947:SF19	ALBA DNA/RNA-BINDING PROTEIN	coord: 7..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh12G011330.1	CmaCh12G011330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding