CmaCh12G011120 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATCCAAGTTCGAGCTCGGGCAAATCGAATCCAGCTGCTCGAGGAGGACCACGAGCTTCTCGAAAGGCGACGACATGAACATCTCACTAACACCAATCTCGACAAAGTATACAAAGTAAACTTCATTGTTTATTTCATACCATTTCTTTCACTTCGTAACTTTTTTGTTTTCCTAATTTAGGAGACGATAAACATGAATCTCGACGAAACTCGGAGACCATATAAGAGCAAAAGTGGCCATATAACTCATTCTCAAATTGAACAGATAAAGAACGGACCAAATGCTTGTTCTTGTCGACGAAATCTTTTGATCCCGACGAGACAACATCAGCACAAAAACCACTCCATTTCCATAGAACCAAACAGTTCCGAGTACTATGTTTTAATGTCGAAATCAACTACTAACAGAACATTATGTTCCATGGATCCGCCAAGGCATTCAGACTTCGTGCCTGATGAGTATCCCTGCTATCCAAATTATATGGCCAAGACAGAGTCCTCGAGGGCAAAACTTCGGTCGCAAAGTGAACCAAGACAGCGACCCGGCTCGAGCGCCTGGCCAAAGTGCAAGCAAGCAGAAAGTGCTTTACAAAAATGA ATGGCAATCCAAGTTCGAGCTCGGGCAAATCGAATCCAGCTGCTCGAGGAGGACCACGAGCTTCTCGAAAGGCGACGACATGAACATCTCACTAACACCAATCTCGACAAAGTATACAAAGAGACGATAAACATGAATCTCGACGAAACTCGGAGACCATATAAGAGCAAAAGTGGCCATATAACTCATTCTCAAATTGAACAGATAAAGAACGGACCAAATGCTTGTTCTTGTCGACGAAATCTTTTGATCCCGACGAGACAACATCAGCACAAAAACCACTCCATTTCCATAGAACCAAACAGTTCCGAGTACTATGTTTTAATGTCGAAATCAACTACTAACAGAACATTATGTTCCATGGATCCGCCAAGGCATTCAGACTTCGTGCCTGATGAGTATCCCTGCTATCCAAATTATATGGCCAAGACAGAGTCCTCGAGGGCAAAACTTCGGTCGCAAAGTGAACCAAGACAGCGACCCGGCTCGAGCGCCTGGCCAAAGTGCAAGCAAGCAGAAAGTGCTTTACAAAAATGA ATGGCAATCCAAGTTCGAGCTCGGGCAAATCGAATCCAGCTGCTCGAGGAGGACCACGAGCTTCTCGAAAGGCGACGACATGAACATCTCACTAACACCAATCTCGACAAAGTATACAAAGAGACGATAAACATGAATCTCGACGAAACTCGGAGACCATATAAGAGCAAAAGTGGCCATATAACTCATTCTCAAATTGAACAGATAAAGAACGGACCAAATGCTTGTTCTTGTCGACGAAATCTTTTGATCCCGACGAGACAACATCAGCACAAAAACCACTCCATTTCCATAGAACCAAACAGTTCCGAGTACTATGTTTTAATGTCGAAATCAACTACTAACAGAACATTATGTTCCATGGATCCGCCAAGGCATTCAGACTTCGTGCCTGATGAGTATCCCTGCTATCCAAATTATATGGCCAAGACAGAGTCCTCGAGGGCAAAACTTCGGTCGCAAAGTGAACCAAGACAGCGACCCGGCTCGAGCGCCTGGCCAAAGTGCAAGCAAGCAGAAAGTGCTTTACAAAAATGA MAIQVRARANRIQLLEEDHELLERRRHEHLTNTNLDKVYKETINMNLDETRRPYKSKSGHITHSQIEQIKNGPNACSCRRNLLIPTRQHQHKNHSISIEPNSSEYYVLMSKSTTNRTLCSMDPPRHSDFVPDEYPCYPNYMAKTESSRAKLRSQSEPRQRPGSSAWPKCKQAESALQK Homology
BLAST of CmaCh12G011120 vs. ExPASy Swiss-Prot
Match: A0A1P8B590 (Protein IQ-DOMAIN 19 OS=Arabidopsis thaliana OX=3702 GN=IQD19 PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 4.5e-04 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy Swiss-Prot
Match: Q7XA83 (Protein IQ-DOMAIN 16 OS=Arabidopsis thaliana OX=3702 GN=IQD16 PE=1 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 9.9e-04 Identity = 47/174 (27.01%), Postives = 73/174 (41.95%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy TrEMBL
Match: A0A6J1HN46 (uncharacterized protein LOC111465701 OS=Cucurbita maxima OX=3661 GN=LOC111465701 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 7.7e-92 Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy TrEMBL
Match: A0A6J1FBW0 (protein IQ-DOMAIN 14-like OS=Cucurbita moschata OX=3662 GN=LOC111444008 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy TrEMBL
Match: A0A6J1CPD3 (protein IQ-DOMAIN 14-like OS=Momordica charantia OX=3673 GN=LOC111012945 PE=4 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 1.8e-56 Identity = 123/175 (70.29%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy TrEMBL
Match: A0A5A7V8W2 (Protein IQ-DOMAIN 14-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001310 PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 1.0e-51 Identity = 116/175 (66.29%), Postives = 141/175 (80.57%), Query Frame = 0
BLAST of CmaCh12G011120 vs. ExPASy TrEMBL
Match: A0A0A0LJD2 (DUF4005 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G011550 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51 Identity = 116/175 (66.29%), Postives = 140/175 (80.00%), Query Frame = 0
BLAST of CmaCh12G011120 vs. NCBI nr
Match: XP_022965981.1 (uncharacterized protein LOC111465701 [Cucurbita maxima]) HSP 1 Score: 346.3 bits (887), Expect = 1.6e-91 Identity = 175/178 (98.31%), Postives = 175/178 (98.31%), Query Frame = 0
BLAST of CmaCh12G011120 vs. NCBI nr
Match: KAG7021149.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 320.1 bits (819), Expect = 1.2e-83 Identity = 160/177 (90.40%), Postives = 167/177 (94.35%), Query Frame = 0
BLAST of CmaCh12G011120 vs. NCBI nr
Match: XP_023538254.1 (uncharacterized protein LOC111799089 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81 Identity = 159/177 (89.83%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of CmaCh12G011120 vs. NCBI nr
Match: XP_022937672.1 (protein IQ-DOMAIN 14-like [Cucurbita moschata]) HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81 Identity = 158/177 (89.27%), Postives = 165/177 (93.22%), Query Frame = 0
BLAST of CmaCh12G011120 vs. NCBI nr
Match: KAG6586300.1 (Protein IQ-DOMAIN 14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 308.5 bits (789), Expect = 3.7e-80 Identity = 157/177 (88.70%), Postives = 164/177 (92.66%), Query Frame = 0
BLAST of CmaCh12G011120 vs. TAIR 10
Match: AT4G14750.1 (IQ-domain 19 ) HSP 1 Score: 46.2 bits (108), Expect = 3.2e-05 Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0
BLAST of CmaCh12G011120 vs. TAIR 10
Match: AT4G10640.1 (IQ-domain 16 ) HSP 1 Score: 45.1 bits (105), Expect = 7.1e-05 Identity = 47/174 (27.01%), Postives = 73/174 (41.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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